prot_F-serratus_M_contig1118.1092.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1118.1092.1
Unique Nameprot_F-serratus_M_contig1118.1092.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length1358
Homology
BLAST of mRNA_F-serratus_M_contig1118.1092.1 vs. uniprot
Match: A0A6H5KSW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSW4_9PHAE)

HSP 1 Score: 395 bits (1014), Expect = 4.490e-115
Identity = 421/841 (50.06%), Postives = 485/841 (57.67%), Query Frame = 0
Query:  545 DLEHWEPEKALNRSIFVDDEIDEHDITVILLIPNEKRVVGIVVGKRGLRLKTILATSKCAITVENDNYCDKESGVRKVILRGSIRSVVLAQQLIMDLVWEEMETAIGVMQFMVPDEASSRIIGRQGSFIKQLQRESACKINTLKDVELRSGLKARVLSVCGSNTAMSKGLYLVSRKIASRWEYAPEWEGGDPTAERGGGLPKKSAAASGVSAPGSSDHGHYDNMDVDSPAGQRRQRGGGQRSRGRGERGDELDSYGSRYDRDRDGGRDXXXXXXGGGRGMERDSGRGGDRXXXXXXXXXRESRFSRPGREQTPDSGPMSGSRSQGQIHPAALN----PWVDPALLATVVGSAAGAPPVGSA------------------EAWQRLLGQIPTSARETLGIAAQ-LGAQAPSATDVYAQVVAQQQQ------QPLQQAPQ-VSWQPSILQQVTPAPVGTGPV-------FLAPGAISQSQPQPQYQQQPGN-----QQDPSTPQIMYQPIQSAMQTSQPQXXXXXXXXXXXXXXXXXXXXQGVYNPSPAITGPPHQGPTHGHGQPPAAFAPXXXXXXXXXXXXLPGMYSSGQAPGQVVAMGSPTSQQVMLQXXXXXXXXXXXXXXXGQSGQPTSQSQAQNQMXXXXXXXXXXXXXXXXXXXXXHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHXXXXXXXXFLQQGQQVDFSRAPSQQQXXXPAQDQRGAPAPASATHGGNP---------APAVNYPSMEVRIPEASVGYVFGKGGSTIGEVKSKAGVTIVTENNMDKSNSRLLHVSGEMGSIQKAITLLNDLVVKWQSLPPKRGH 1334
            DLE+W+PE AL RS+F+ D++D+H ITV+LLIPNEKRVVGIVVG+ GLRLKTIL+TSKC ITVEND +CDKESGVRKV+LRGSIR+VV+AQQLIMDLVWEEMETAIGVMQFM+PDEASSR+IGRQG+FIKQLQRES CKINTL D ELRSGLKARV++VCG+N++MSKGLYL++RKIASRWEYAPEWEGGDPT   G GLP    AA  +  P SS      +MD DS                     D++D Y      DRDGGR+        GR            XXXXXXXXX    +    R+     G   GS    +     L     PW+      T   SAA APP                      EAWQRLLGQIP +ARE+LG  A  + A A +A D++ Q+  +         Q L QAPQ VSWQP                       FL P +++ SQPQ   Q Q         Q  S  Q++YQP  SA+Q++QPQ              XXXXXX            P  Q P     QPP  +                    +G + GQVV+M           XXXXXXXXXXXXXXX                XXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXX                  XXX                                 + PSMEVRIPEASVGYVFGKGG+TI +VKSKAGV I T++ +D +NSRLLHV+G+M +IQ AITLLNDLVVKWQSLPPKR +
Sbjct:  139 DLENWDPENALIRSMFLTDDLDKHAITVVLLIPNEKRVVGIVVGRHGLRLKTILSTSKCTITVENDKFCDKESGVRKVVLRGSIRNVVMAQQLIMDLVWEEMETAIGVMQFMIPDEASSRVIGRQGTFIKQLQRESGCKINTLNDTELRSGLKARVMNVCGTNSSMSKGLYLIARKIASRWEYAPEWEGGDPTLPSGQGLPSAPTAAHSLPPPDSS------SMDADSGRDSGXXXXXXXXXXXXXXXXDDIDRY------DRDGGRN--------GRXXXXXXXXXXXXXXXXXXXXXXXXXYXXXXRDSHDSGGGRDGSSKSSRSAAPPLQTTSAPWI------TDQPSAA-APPAXXXXXXXXXXXXXXXXXXXXXEAWQRLLGQIPATARESLGFGAMPVPATAAAAADMFGQLSGRAAMASAAPPQQLHQAPQQVSWQPPXXXXXXXXXXXXXXXXXXXXXXFLPPTSLAPSQPQQYVQMQAATAAASQDQTQSGSQVLYQPTVSALQSAQPQQQQALYTTTSQQPQXXXXXXXXXM----PTHSPQQQAPVGVPQQPPHGYQSTQQPQQLQQTTVFSTTPPTGLSTGQVVSMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAGSSDPSMEVRIPEASVGYVFGKGGNTIADVKSKAGVNISTDSTVDGTNSRLLHVTGKMSAIQHAITLLNDLVVKWQSLPPKRNN 948          
BLAST of mRNA_F-serratus_M_contig1118.1092.1 vs. uniprot
Match: D7FJW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJW6_ECTSI)

HSP 1 Score: 345 bits (884), Expect = 2.370e-98
Identity = 178/239 (74.48%), Postives = 206/239 (86.19%), Query Frame = 0
Query:  545 DLEHWEPEKALNRSIFVDDEIDEHDITVILLIPNEKRVVGIVVGKRGLRLKTILATSKCAITVENDNYCDKESGVRKVILRGSIRSVVLAQQLIMDLVWEEMETAIGVMQFMVPDEASSRIIGRQGSFIKQLQRESACKINTLKDVELRSGLKARVLSVCGSNTAMSKGLYLVSRKIASRWEYAPEWEGGDPTAERGGGLPKKSAAASGVSAPGSSDHGHYDNMDVDS--PAGQRRQRG 781
            DLE+W+PEKAL RS+F+ D++D+H ITV+LLIPNEKRVVGIVVG+ GLRLKTIL+TSKC ITVEND +CDKESGVRKV+LRGSIR+VV+AQQLIMDLVWEEMETAIGVMQFM+PDEASSR+IGRQG+FIKQLQRES CKINTL D ELRSGLKARV++VCG+N++MSKGLYL++RKIASRWEYAPEWEGGDPT   G GLP    AA  +  P SS      ++D DS   +G RRQRG
Sbjct:  378 DLENWDPEKALIRSMFLTDDLDKHAITVVLLIPNEKRVVGIVVGRHGLRLKTILSTSKCTITVENDKFCDKESGVRKVVLRGSIRNVVMAQQLIMDLVWEEMETAIGVMQFMIPDEASSRVIGRQGTFIKQLQRESGCKINTLNDTELRSGLKARVMNVCGTNSSMSKGLYLIARKIASRWEYAPEWEGGDPTLPSGQGLPSAPTAAHSLPPPDSS------SVDADSGRDSGGRRQRG 610          
BLAST of mRNA_F-serratus_M_contig1118.1092.1 vs. uniprot
Match: A0A6H5KUG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUG6_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 1.980e-7
Identity = 35/61 (57.38%), Postives = 48/61 (78.69%), Query Frame = 0
Query:  389 SSQQGLIMTGNKDEDVKLTADFFLAAKGNSYKAARVLIETVLATIDRRERLEKETLKRSHA 449
            ++ + L++T  ++ DV+  ADF LA KGNSYK ARV +E+VLATIDR+ERLE+E+LKR  A
Sbjct:  376 AASKSLVLTA-ENLDVQRAADFMLAVKGNSYKGARVFVESVLATIDRKERLEQESLKRRQA 435          
BLAST of mRNA_F-serratus_M_contig1118.1092.1 vs. uniprot
Match: A0A7S2UVE9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVE9_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 4.500e-7
Identity = 30/72 (41.67%), Postives = 46/72 (63.89%), Query Frame = 0
Query: 1256 SMEVRIPEASVGYVFGKGGSTIGEVKSKAGVTIVTENNMDKSNSRLLHVSGEMGSIQKAITLLNDLVVKWQS 1327
            + E+ IPE ++G+V G+GGS I +V+ ++G  I T    D  + RLL VSG+  S+  A+ +LN+LV  W S
Sbjct:   32 TTEIEIPEGAMGFVMGRGGSMIRDVRKRSGAQIETSQKTDGGH-RLLVVSGDFESVHSAVQILNELVTTWAS 102          
BLAST of mRNA_F-serratus_M_contig1118.1092.1 vs. uniprot
Match: F2UGV0_SALR5 (Uncharacterized protein n=2 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UGV0_SALR5)

HSP 1 Score: 63.2 bits (152), Expect = 2.710e-6
Identity = 45/148 (30.41%), Postives = 77/148 (52.03%), Query Frame = 0
Query:  583 VGIVVGKRGLRLKTILATSKCAITVENDNYCDKESGVRKVILRGSIRSVVLAQQLIMDLVWEE--------METAIGVMQFMVPDEASSRIIGRQGSFIKQLQRESACKINTLKDVELRSGLKARVLSVCGSNTAMSKGLYLVSRKIA 722
            VG ++G+ G  ++ + A S C + V  +  C+  + VRK+ LRGS  SV   +Q++   + E+         ET   +    +PD+   R+IGRQGS I+Q+Q  S   ++  K  E R G   R ++V G+   + K   L+ +K++
Sbjct:  160 VGRLIGREGSNIRQMEALSGCQVNVPAE--CEPGTSVRKITLRGSPESVRYCKQMLEQKIREDGGDPSAPATETITKIAY--IPDDHVGRVIGRQGSTIRQIQELSGAHMDIAK--ECRPGEYQREVTVTGTPAQVEKCEELIRKKVS 301          
BLAST of mRNA_F-serratus_M_contig1118.1092.1 vs. uniprot
Match: UPI000771BD6A (tudor and KH domain-containing protein homolog n=1 Tax=Cephus cinctus TaxID=211228 RepID=UPI000771BD6A)

HSP 1 Score: 62.4 bits (150), Expect = 5.160e-6
Identity = 50/165 (30.30%), Postives = 82/165 (49.70%), Query Frame = 0
Query:  568 HDITVILLIPNEKRVVGIVVGKRGLRLKTILATSKCAITVENDNYCDKESGVRKVILRGSIRSVVLAQQLIMDLVWEEMETAIGVMQFMVPDEASSRIIGRQGSFIKQLQRESACKINTLKDVELRSGLKARVLSVCGSNTAMSKGLYLVSRKIASRWEYAPEWE 732
            H     L +P++  VV  V+G++G  +K I A ++ +I        D ES  R  I+RG   S+ LA+ +I  ++  + +  I   +  +P  A SR+IGR G  I+Q+Q  S+ KI   K +      K RV+ + GS+  ++  L L+  K+    E   E E
Sbjct:   48 HQSVSFLKVPSQ--VVPAVIGRQGQIIKNIEANTESSIKFAPP---DIESKDRVCIIRGKPESIQLAEHMINTII--QSQPIIETYETFIPQRACSRVIGRGGETIQQIQTYSSAKIILEKTLSNNPDAKRRVI-IKGSSEQIATALSLIEEKVREDNEAREELE 204          
BLAST of mRNA_F-serratus_M_contig1118.1092.1 vs. uniprot
Match: A0A7S2XV36_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV36_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.330e-5
Identity = 34/83 (40.96%), Postives = 52/83 (62.65%), Query Frame = 0
Query: 1245 GGNPAPAVNYP--SMEVRIPEASVGYVFGKGGSTIGEVKSKAGVTIVTENNMDKSNSRLLHVSGEMGSIQKAITLLNDLVVKW 1325
            GG   P++N    + E+ IPE SVG+VFG+GG+ I +V+ ++G  I ++     +  R+L V+G M S+Q A  +LNDLV  W
Sbjct:  385 GGGDPPSLNLTKTTTEIEIPEESVGFVFGRGGNQIRDVRQRSGAGIRSDTKT-ATGHRVLVVNGSMQSVQMAAGMLNDLVTAW 466          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1118.1092.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5KSW4_9PHAE4.490e-11550.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJW6_ECTSI2.370e-9874.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KUG6_9PHAE1.980e-757.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2UVE9_9STRA4.500e-741.67Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F2UGV0_SALR52.710e-630.41Uncharacterized protein n=2 Tax=Salpingoeca rosett... [more]
UPI000771BD6A5.160e-630.30tudor and KH domain-containing protein homolog n=1... [more]
A0A7S2XV36_9STRA2.330e-540.96Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 673..693
NoneNo IPR availablePANTHERPTHR46007FAMILY NOT NAMEDcoord: 176..1122
NoneNo IPR availablePANTHERPTHR46007:SF1MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 12coord: 176..1122
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 1254..1318
score: 14.466
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 571..638
score: 9.435
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 650..717
score: 12.412
IPR004087K Homology domainSMARTSM00322kh_6coord: 649..722
e-value: 1.4E-4
score: 31.3
coord: 568..643
e-value: 3.1E-5
score: 33.4
coord: 1253..1323
e-value: 8.3E-9
score: 45.3
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 1249..1354
e-value: 1.2E-13
score: 52.9
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 562..650
e-value: 4.5E-10
score: 41.0
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 651..725
e-value: 1.0E-11
score: 46.4
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 1254..1323
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 570..647
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 652..725
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 1257..1319
e-value: 1.7E-9
score: 37.3
coord: 573..640
e-value: 8.9E-8
score: 31.8
coord: 654..712
e-value: 2.5E-7
score: 30.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1118contigF-serratus_M_contig1118:32334..45416 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1118.1092.1mRNA_F-serratus_M_contig1118.1092.1Fucus serratus malemRNAF-serratus_M_contig1118 32334..45416 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1118.1092.1 ID=prot_F-serratus_M_contig1118.1092.1|Name=mRNA_F-serratus_M_contig1118.1092.1|organism=Fucus serratus male|type=polypeptide|length=1358bp
MSPARGGKGAVGRRAAASEAGGAAARGRKKRISRAGRAKMAAAKAAAAAG
GGSAPAAPHVGTVTPAGSGDQPPDEAAAADIPPVKEEEQADQKDPVLPDA
EDTDVETNGDHVPKEPEHDNAEAPDDGTNGSTGAPSAEASEEAPHSSSPT
VAVVTNADVKPAVDTSAPVAEPPLHQAAAPSNEKAPAEQPVEDQPEPDEV
EGEEEEEEDEGEEEEEEDEEGEGDEEDEEEEEEEDEDEEGLDDDGTEDDT
VAETNGQPHEDEIPVAKPTPLSAAPGAKAETSKKENSAETRLASDKIAEP
GVEKKANAEASKPSDKETPPASGTTPAASTTPAPAVDAPASKPAGDAGSG
GSGGPGSRWSPHVDGADETPEAAAVAAAAVAAAAAAAASSQQGLIMTGNK
DEDVKLTADFFLAAKGNSYKAARVLIETVLATIDRRERLEKETLKRSHAT
TGGTKEKDNGDSNKRMRTADSTPKDEAAGAANRNRRGGVRQRERDERKRE
RADSRDSRETAGAARDPKRDAKGGDRSGLKKDSFAGGAGGPPFRDLEHWE
PEKALNRSIFVDDEIDEHDITVILLIPNEKRVVGIVVGKRGLRLKTILAT
SKCAITVENDNYCDKESGVRKVILRGSIRSVVLAQQLIMDLVWEEMETAI
GVMQFMVPDEASSRIIGRQGSFIKQLQRESACKINTLKDVELRSGLKARV
LSVCGSNTAMSKGLYLVSRKIASRWEYAPEWEGGDPTAERGGGLPKKSAA
ASGVSAPGSSDHGHYDNMDVDSPAGQRRQRGGGQRSRGRGERGDELDSYG
SRYDRDRDGGRDRERDRDGGGRGMERDSGRGGDRRGGDRSGGGRESRFSR
PGREQTPDSGPMSGSRSQGQIHPAALNPWVDPALLATVVGSAAGAPPVGS
AEAWQRLLGQIPTSARETLGIAAQLGAQAPSATDVYAQVVAQQQQQPLQQ
APQVSWQPSILQQVTPAPVGTGPVFLAPGAISQSQPQPQYQQQPGNQQDP
STPQIMYQPIQSAMQTSQPQQQPPQQQQPPQQQQQQPPQQQGVYNPSPAI
TGPPHQGPTHGHGQPPAAFAPQQQQQQPQQPQQLPGMYSSGQAPGQVVAM
GSPTSQQVMLQPGQQQQQPQQVYPTPGQSGQPTSQSQAQNQMQQQGPSQQ
QQQPSSLHTSSPSHQSSGSVTSQNPQQQQVGQKVVSSQNPVMSHQGQMHP
QQQQQQQFLQQGQQVDFSRAPSQQQQQQPAQDQRGAPAPASATHGGNPAP
AVNYPSMEVRIPEASVGYVFGKGGSTIGEVKSKAGVTIVTENNMDKSNSR
LLHVSGEMGSIQKAITLLNDLVVKWQSLPPKRGHKPGGGGGGGGVGYRGG
GGGGRFG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR036612KH_dom_type_1_sf
IPR004088KH_dom_type_1