prot_F-serratus_M_contig1112.1063.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1112.1063.1
Unique Nameprot_F-serratus_M_contig1112.1063.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length683
Homology
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 484 bits (1245), Expect = 7.850e-150
Identity = 302/831 (36.34%), Postives = 410/831 (49.34%), Query Frame = 0
Query:    1 MRNPEIKGEKYAGAVAFCTLACLQGYWQCPLAEGVGEYFTFVTGNCLFTPTRVPQGVMNATSYFQGVIMEVLGNLVGRACLIYVGDVQVIGR-----------------ECGLFLAAHKLVLFAKEVKWRGKLYSGMAVRHDPECVRGLVEMRRPETVGKLMKFLQATSWMRLSLPHMAEVVTPLRALME-HRLNRTSRKKKMASRRAQTDGDWTPEREEAWDNSRDMLMNAFELSFQRPDECRMLMFADASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRGSQLCWPTVDKESFETLSTFQRVPYRQGDSLNIFCDPRNFAYIFCPPIL-----------------------------------WRDVEQGFVAAP---RRVACMHEPVHL---LAVKGEIKDRQDAVAR----------DPVEVVTP-------------------------------------------------------LGNMEKDIAKFVRECLPYTDSKADIAMPRPLGDLVHGTEVGDVLHFDYLSLGENEAINTGGLVDG-GYTHVLVLMDDVSRFVWLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAVQWALNSVYRERMGTTPLHMMTGRPLATVMSVLAGEDG-----------------------QENFRRDVVKRVREQRERVREVSGRGYLQVFEVDDYVLVARVRKPGHVPKLVQTWTGPWRVVPGGSKHVRVVEYFVPGETKDVHVVRMRPYVDLSL 683
            M + E   ++ + A  + +L  LQGYW  PLA    E FT +    L++P RVPQGV+NATSY+QG +  +L +L    C+++V D+   G                    GLF+AAHK   +   VKW GK+YS   + HD + + GL  +RRPET G+LM+FLQA +W+R SLP M+E+V PLR  +E H     +R K++AS RA     WTP   E+W+ ++DM+ NA  L      +  +LMF DAS+  WG ++TQVP+ E+   +   DMSHEPL FLSG FRGSQL W TVDKE F  +STF+R+ Y     ++I  D RN AYIF P                                      W D+   +V  P    R A +  P      L  K  I++ Q  V            D +  V P                                                          M++D+ +FV++CL   DSK+   +PRP G+ VHG   G+VLHFDYL +G++  +   GL +  GY ++LV+MDD+S F W++    C+  + A+ +   C +  VP+ + SD  THF   VM  +   L V   F VAN  WS+GT ERM R +V+T++AV  ERRR   +W   + AVQWALN+ YRER  +TP H+M GR   T  S LA   G                       Q    + V ++V   R R R  + RG L  F V DYV+VARVR+ G  PKL  TWTGPWRVV    KHV  V+  V G+ +DVHV R+R Y D  L
Sbjct:  732 MPDLEADMQRLSRATCYGSLDMLQGYWGMPLAPEAQEIFTMIGPGGLYSPERVPQGVLNATSYYQGTMNSILHDL---NCIVWVDDIVYWGETEEDLLNTLDLILARFEHHGLFVAAHKCTFYTTSVKWCGKVYSKGVIEHDRDRLSGLANLRRPETAGELMQFLQAVNWLRTSLPRMSEIVAPLREFLELHMAGNPNRTKRVASNRAIAPDAWTPAMVESWERAQDMVANAVTLYHPVAGKA-VLMFPDASDEHWGSFVTQVPQSEVDNNVPVEDMSHEPLGFLSGTFRGSQLRWATVDKEGFAIISTFRRLEYLLWGGVHIHTDHRNLAYIFDPEACISTVPKTTAQRLENWKAVLGQYDYTIQHISGERNCWGDLLSRWVNVPAVSNRSAAVFMPSTPDCNLPSKNAIREVQQTVRASVGDTNACFTDTLGRVAPDDEGLFRVMIDGRKVLWIPDTARDMQLRLMLCAHMKEAGHRGVTATMHRLREYCCWSTMDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDATKLKQQVQNVIQTQAVLHKQVQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSEL 1558          
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 441 bits (1134), Expect = 1.060e-133
Identity = 292/835 (34.97%), Postives = 401/835 (48.02%), Query Frame = 0
Query:    1 MRNPEIKGEKYAGAVAFCTLACLQGYWQCPLAEGVGEYFTFVTGNCLFTPTRVPQGVMNATSYFQGVIMEVLGNLVGRACLIYVGDVQVIGRE-----------------CGLFLAAHKLVLFAKEVKWRGKLYSGMAVRHDPECVRGLVEMRRPETVGKLMKFLQATSWMRLSLPHMAEVVTPLRALME-HRLNRTSRKKKMASRRAQTDGDWTPEREEAWDNSRDMLMNAFELSFQRPDECRMLMFADASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRGSQLC-WPTVDKESFETLSTFQRVPYRQGDSLNIFCDPRNFAYIFCPPIL-----------------------------------WRDVEQGFVAAPR---RVACMH---EPVHLLAVKGEIKDRQDAVA--------------------------------------------------------------RDPVEVVTPLGN------MEKDIAKFVRECLPYTDSKADIAMPRPLGDLVHGTEVGDVLHFDYLSLGENEAINTGGL-VDGGYTHVLVLMDDVSRFVWLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAVQWALNSVYRERMGTTPLHMMTGRPLATVMSVLAGEDG-----------------------QENFRRDVVKRVREQRERVREVSGRGYLQVFEVDDYVLVARVRKPGHVPKLVQTWTGPWRVVPGGSKHVRVVEYFVPGETKDVHVVRMRPYVDLSL 683
            M NPE    + + A  + +L  LQ YWQCPLA    E FT  T   L+TP RVPQG++NATSYFQ  +  +L    G  C ++V DV   G +                  GL++AAHK   F   + W GK+YS   V HDPE + GL  MRRPET G+LM+FLQA +W+R SLP MAEVV PLR  +E H +   SR K++A  RA      TP   EAW  ++D++  A  LS   P  C +LMF DAS+  WG +LTQVP+ +L  G+   DM+HEP+ FLSG F+G+Q   W TVDKE +  +STF+R+ Y   DS++IF D RN AYIF P                                      W D+   +V+ P    R A ++   EP   +  K  ++D Q A                                                                R  V  +  L        ME+ +  FV++CL   DSKA   +PRPLG+ VHGT  G+V+HFDYL +G +  +   GL  + G+ ++LV+MDD+S +VWL+    C+  + A+ +   C    VP+ + SD  +HF   +M  + + L V  +F VAN  WS+GT ERM R VV+T++A+  E R    +W   + AVQWALN+ +RER G+TP H+M GR   T +S LA   G                       Q +  ++V+ +V+  R + R  +  G L  F V DYV+VA  R                        HV  V+  V GE +DVHV R+R Y D +L
Sbjct:  830 MPNPEASIAQLSAAKFYGSLDLLQWYWQCPLAPEAQEIFTIATPGGLYTPKRVPQGILNATSYFQATLTRILD---GLNCFVWVDDVVYWGMDKDDLLDTLDLILDRLEGAGLYVAAHKCTFFETSITWCGKVYSEGQVEHDPERLSGLATMRRPETAGELMQFLQAVNWLRTSLPRMAEVVWPLRVFLEQHLVGAKSRTKRVAENRAIAADALTPALVEAWTAAQDLVARAVALSHPSPG-CAVLMFPDASDEHWGSFLTQVPQDQLDRGVPVEDMAHEPMGFLSGTFKGAQQQRWATVDKEGYAIVSTFKRLEYLLWDSVHIFTDHRNLAYIFDPEACVSAVAKTTAQRLDQWKAVLGQYDYTIRHISGERNCWGDLLSRWVSVPSVSVRAAAVYAPSEPDAAMPSKQVVRDAQQAARSKLGALAGPASSFSTAVGTATLDAEGLFRVGMNGRDVLWIPDQASALQVRLMVCAHMKEAGHRGAVATLQRLSEYCCWFRMEEHVTDFVKQCLHCMDSKAGEKVPRPLGETVHGTRPGEVVHFDYLYVGASGPLGDDGLDEEEGFKYILVMMDDMSNWVWLEPTGACTACLTAQHLLTWCKILGVPEVWVSDTASHFKNHMMAALETALGVDRNFSVANSPWSNGTCERMMREVVRTLKAMIQEERGRTRDWVDLVPAVQWALNTAFRERYGSTPYHVMFGRAPRTALSTLASSTGAEWKVDVLDEKSLRLKVQHVVEAQRHLHKEVLDKVQASRSKHRASARVGSLPDFVVGDYVIVAAERL-----------------------HVYGVQNIVSGEVRDVHVARLRFYADAAL 1637          
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Match: A0A6H5JCX8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX8_9PHAE)

HSP 1 Score: 297 bits (761), Expect = 4.060e-87
Identity = 194/565 (34.34%), Postives = 271/565 (47.96%), Query Frame = 0
Query:  133 VEMRRPETVG-KLMKFLQATSWMRLSLPHMAEVVTPLRALME-HRLNRTSRKKKMASRRAQTDGDWTPEREEAWDNSRDMLMNAFELSFQRPDECRMLMFADASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRGSQLCWPTVDKESFETLSTFQRVPYRQGDSLNIFCDPRNFAYIFCPPIL-----------------------------------WRDVEQGFVAAP---RRVACMHEPVHL---LAVKGEIKDRQDAVAR----------DPVEVVTP-------------------------------------------------------LGNMEKDIAKFVRECLPYTDSKADIAMPRPLGDLVHGTEVGDVLHFDYLSLGENEAINTGGLVDG-GYTHVLVLMDDVSRFVWLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAVQWALNSVYRERMGTTPLHMMTGRPLATVMSVLAGEDGQ 588
            +E+R  +T G    + + A +W+R SLP M+E+V PLR  +E H     +R K++AS RA     WTP   E+W+ ++DM+ NA  L      +  +LMF DAS+  WG ++TQVP+ E+   +   DMSHEPL FLSG FRGSQL W TVDKE F  +STF+R+ Y     ++I  D RN AYIF P                                      W D+   +V  P    R A +  P      L  K  I++ Q  V            D +  V P                                                          M++D+ +FV++CL   DSK+   +PRP G+ VHG   G+VLHFDYL +G++  +   GL +  GY ++LV+MDD+S F W++    C+  + A+ +   C +  VP+ + SD  THF   VM  +   L V   F VAN  WS+GT ERM R +V+T++AV  ERRR   +W   + AVQWALN+ YRER  +TP H+M GR   T  S LA   G+
Sbjct:  101 MEVRGVDTPGFHEARRISAVNWLRTSLPRMSEIVAPLREFLELHMAGNPNRTKRVASNRAIAPDAWTPAMVESWERAQDMVANAVTLYHPVAGKA-VLMFPDASDEHWGSFVTQVPQSEVDNNVPVEDMSHEPLGFLSGTFRGSQLRWATVDKEGFAIISTFRRLEYLLWGGVHIHTDHRNLAYIFDPEACISTVPKTTAQRLENWKAVLGQYDYTIQHISGERNCWGDLLSRWVNVPAVSNRSAAVFMPSTPDCNLPSKNAIREVQQTVRASVGDTNACFTDTLGRVAPDDEGLFRVMIDGRKVLWIPDTARDMQLRLMLCAHMKEAGHRGVTATMHRLREYCCWSTMDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGE 664          
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE)

HSP 1 Score: 261 bits (668), Expect = 8.250e-77
Identity = 141/335 (42.09%), Postives = 190/335 (56.72%), Query Frame = 0
Query:  373 MEKDIAKFVRECLPYTDSKADIAMPRPLGDLVHGTEVGDVLHFDYLSLGENEAINTGGLVDG-GYTHVLVLMDDVSRFVWLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAVQWALNSVYRERMGTTPLHMMTGRPLATVMSVLAGEDG-----------------------QENFRRDVVKRVREQRERVREVSGRGYLQVFEVDDYVLVARVRKPGHVPKLVQTWTGPWRVVPGGSKHVRVVEYFVPGETKDVHVVRMRPYVDLSL 683
            M++D+ +FV++CL   DSK+   +PRP G+ VHG   G+VLHFDYL +G++  +   GL +  GY ++LV+MDD+S F W++    C+  + A+ +   C +  VP+ + SD  THF   VM  +   L V   F VAN  WS+GT ERM R VV+T++AV  ERRR   +W   + AVQWALN+ YRER  +TP H+M GR   T  S LA   G                       Q    + + ++V   R R R  + RG L  F V DYV+VARVR+ G  PKL  TWTGPWRVV    KHV  V+  V G+ +DVHV R+R Y D  L
Sbjct:    1 MDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREVVRTMKAVLQERRRNLRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDATKLKQQVQNVIQTQAVLHKQIQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSEL 335          
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Match: A0A0G4J7H8_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J7H8_PLABS)

HSP 1 Score: 264 bits (675), Expect = 2.930e-72
Identity = 216/845 (25.56%), Postives = 350/845 (41.42%), Query Frame = 0
Query:    1 MRNPEIKGEKYAGAVAFCTLACLQGYWQCPLAEGVGEYFTFVTGNCLFTPTRVPQGVMNATSYFQGVIMEVLGNLVGRACLIYVGDVQVIGRE--------------CG---LFLAAHKLVLFAKEVKWRGKLYSGMAVRHDPECVRGLVEMRRPETVGKLMKFLQATSWMRLSLPHMAEVVTPLRALMEHRLNRTSR--------KKKMASRRAQTDGDWTPEREEAWDNSRDMLMNAFELSFQRPDECRMLMFADASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRGSQLCWPTVDKESFETLSTFQRVPYRQGDSLNI--FCDPRNFAYIFCPPI-------------------------------------------------------------------------------------------------------LWRDVEQGFVAAPRRVACMHEPVHLLAV--KGEIKDRQDAVARDPVEVVTPLGNMEKDIAKFVRECLPYTDSKADIAMPRPLGDLVHGTEVGDVLHFDYLSLGENEAINTGGLVDGGYTHVLVLMDDVSRFVWLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAVQWALNSVYRERM-GTTPLHMMTG------------------RPLAT---VMSVLAGEDGQENFRRDV--------VKRVREQRERVREVSGRGYLQVFEVDDYVLVARVRKPGHVPKLVQTWTGPWRVVPGGSKHVRVVEYFVPGETKDVHVVRMRPYVDLSL 683
            M N E    K  G   F T+   +G+W  PLA+   E F+F+T + ++TPTR  QG MN+   FQ  +  +  ++     LI++ D+    R               CG   L L   K  LFA+E+KW G++YS   +RHDPE +  L+ M +P T+  L +FL A +WMR S+P  A +V PL+A+++       R        +   AS     D  W     +A+++ R  L+N  +L++ +PD  +  +F DAS + W   +TQ+P++++   L   +  HEPLAF    F GS+L WP V+KE+   +   +R  +    S     +CD RN  YIF P                                                                                                         LW+  + G    P  V C    + +L +   G    R   VA+  +       +++KD+ +  ++C+    ++    +PRPLG+ +HG     V+  DYL +   E +      D  Y ++LV+ DD S +V L      +   AA  + +  A FE P+   +DGG+HFT +V++ +S    + HH  +A   W++GT+ER NR V+  +R++ SE +     WP     VQ A+N    +R+ G  P  ++TG                  RP++    VM +   +   +   + V           V+++  R+++     ++      DYVL A+    G   KL   W GP+RVV   +  V  +E  +     + H  R+R Y D  L
Sbjct:  237 MPNVEAATRKLNGMTCFFTIDAHKGFWLMPLAKECQEIFSFMTDDAVYTPTRSIQGGMNSALQFQARVARIFDDMQDHL-LIWIDDLLGFARSEAELLAQLSLVLERCGERNLKLNPTKCTLFARELKWCGRIYSKDGIRHDPERIESLMNMPQPTTIKDLQQFLWAANWMRTSVPGYAHIVGPLQAIIDEAHAELRRIQPDLRNVQSSSASSMGLIDLGWNTVHSQAFEDLRFALINHVQLAYPKPDY-QTCLFTDASEVAWSAVITQIPREDIA--LPVHEQRHEPLAFYGKRFSGSELRWPIVEKEAAAIIYATERGDFLLQTSRPFLTYCDHRNLTYIFNPDSEVKKHTAQKLQRWALHLQGFDYEIREISGVDNVWADLLTRWGSGRIALKCRTTRLLKMDNLRATPRKHPDFSWPTEQEIRDSQRLLTREEKIEDGIFFDDTDRLWKSTD-GATLIPIHVGCRSLRLRILIIGHSGSAGHRASEVAKQTIMSRFCWPDIDKDVEQMCQQCIHCITTRGGRKVPRPLGEALHGQRPFQVMAMDYLYV---EPVRG---TDHPYKYILVMKDDYSGYVRLVPCQGATSRAAADAINQWIADFETPEYLVTDGGSHFTAEVIKELSRLREIQHHITLAYCPWANGTVERANRTVLNMLRSILSEAQISTHNWPYLCPVVQHAINHAPSKRLAGNAPYTVITGNQPESPLDHIWDPAADQFRPVSAESVVMYLAEMQVALDELHKAVDDAKTAQHAANVQQRARRLKKYQSESFIP----GDYVLNAKAVL-GPAQKLAAHWRGPYRVVRRINDQVYELEDILTSRRFEAHTQRIRRYADEDL 1065          
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Match: A0A6G0MV46_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0MV46_9STRA)

HSP 1 Score: 251 bits (642), Expect = 3.870e-69
Identity = 211/775 (27.23%), Postives = 336/775 (43.35%), Query Frame = 0
Query:   10 KYAGAVAFCTLACLQGYWQCPLAEGVGEYFTFVTGNCLFTPTRVPQGVMNATSYFQGVIMEVLGNLVGRACLIYVGDVQVIGR-----------------ECGLFLAAHKLVLFAKEVKWRGKLYSGMAVRHDPECVRGLVEMRRPETVGKLMKFLQATSWMRLSLPHMAEVVTPLRALMEHRLNRTSRKKKMASRRAQTDGDWTPEREEAWDNSRDMLMNAFELSFQRPDECRMLMFADASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRGSQLCWPTVDKESFETLSTFQRVPY--RQGDSLNIFCDPRNFAYIFCPPI--------------------------------LWRDVEQGFV------------------AAPR-RVACMHEPV-----HLLAVKGEIKDRQDAVARDPVE-VVTPLGNMEKDIAKFVRECLPYTDSKADIAMPRPLGDLVHGTEVGDVLHFDYLSLGENEAINTGGLVDGGYTHVLVLMDDVSRFVWLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAVQWALNSVYRERMG-TTPLHMMTGRPLATVMSVL------------------AGEDGQENFRRDVVK---RVREQRERVR---EVSGRGYLQVFEVDDYVLVARVRKPGHVPKLVQTWTGPWRVVPGGSKHVRVVEYFVPGETKDVHVVRMRPYVDLSL 683
            K  GA  F T    +G+WQ  L     E+F+F+T + ++TPTRVPQG  ++  +FQ  + EV  +++    LI+V D+ V  R                 + GL L A K  LFA+E+ W G+L  G  VRHDPE V  L  +  P T   L + L A +W+R S+   A    PL+  +E      SRKK+ A   + T   W+   +E +      +  + +LSF   D   + +  DAS+  W   ++QV   +   GL  TD +HE +    G F+G+QL W   +KE +  +   + + Y   + +   +FCD  N   IFCP                                  +W D+   +V                  A  R R  C  + V     H++A +   + R  + A    + ++   G + +D   FV  CL     K  + + RP  +        +VLHFDYL +GE+          G   ++LVL D+++ F  L      +  VAA  V      + +P  + SD GT+F   +M  +  RL+V+H F      W  GT+E +NR +++ +R +  E +     W   L  VQ  LN      +G   PL + TG  + T +  +                    ED    +R  +      V++++ER R    ++ RG L+ F V DYVL +RV +     KL+  W GP+RV     +   ++E+ + G+T +VH  R++ + D S+
Sbjct:   10 KVKGAYFFATFDLFKGFWQLMLHPDCQEFFSFITNDTVYTPTRVPQGATDSPIHFQNQMQEVFRDMLYDNVLIWVDDIVVFARTVEEFLAVLKKFFERLRQYGLKLNAKKSCLFAREISWCGRLIDGTGVRHDPERVDALCSLPLPATAADLQRLLCAANWLRESIVDFARHAAPLQEKLEAAFAGRSRKKRYAEGLSLT---WSAPEQEQFQVFLQCVARSTKLSFPSEDAV-VCVTTDASDRGWSLIVSQVEHWDDGKGL--TDQAHELILCKGGSFKGAQLHWSIAEKEGYPIIKAAKGLEYLLHRTNGFKLFCDHANLIQIFCPHTEIRKHVRGKLQRWALMLSDYRYEIEHVKGEDNIWADIVSRWVHSVPTESSVKTVRTRASSAVSRLRPLCDDDFVWPTADHVMAAQQRFRRRAPSAAVPSSDGLLLVEGRLVQD---FVAACLLCKHVKGGLIIQRPWSEHREPAARNEVLHFDYLFMGESY---------GTTCYLLVLKDELTHFCELIPCDSPTSSVAAAAVLDWAKRYGLPAMWTSDNGTYFKNTLMENLRERLKVLHTFVPVYTPWVDGTVEHLNRDILQVMRVLLLEYQLDTKSWEYLLPLVQANLNQTPVASLGGKAPLVLFTGLQVPTQLDTMLIPRSMQTKDKLMTIDLEVVEDELHEWRESLQAMHAEVKDRKERTRLYQSMAKRGKLENFTVGDYVLWSRVDERLRGNKLMVRWVGPYRVTEA-REFSFMIEHLLTGDTLEVHGSRLKFFDDASM 765          
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Match: A0A6G0QQ04_9STRA (Integrase catalytic domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6G0QQ04_9STRA)

HSP 1 Score: 248 bits (634), Expect = 4.480e-67
Identity = 206/690 (29.86%), Postives = 306/690 (44.35%), Query Frame = 0
Query:   13 GAVAFCTLACLQGYWQCPLAEGVGEYFTFVTGNCLFTPTRVPQGVMNATSYFQGVIMEVLGNLVGRACLIYVGDV---------------QVIGR--ECGLFLAAHKLVLFAKEVKWRGKLYSGMAVRHDPECVRGLVEMRRPETVGKLMKFLQATSWMRLSLPHMAEVVTPLRALMEHRLNRT-SRKKKMASRRAQTDGDWTPEREEAWDNS-RDMLMNAFELSFQRPDECRMLMFADASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRGSQLCWPTVDKESFETLSTFQRVPYRQGDSLNIFCDPRNFAYIFCP-----------------------------------PILWRDVEQGFVAAP--------RRVACM-------------------------------------------HEPVHLLAVKGEIKDRQDA-VARDPVEVVTPLG---------------------NMEKDIAKFVRECLPYTDSKADIAMPRPLGDLVHGTEVGDVLHFDYLSLGENEAINTGGLVDGGYTHVLVLMDDVSRFVWLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAVQWALNSVYRERMG-TTPLHMMTGRP 574
            GA  F  L   +G  Q PL     EYFTFVT   ++TPTRVP G  +A +Y QGV+ E+LG+L+G   L ++GD+               +V+ R  E GL L A K   FA EV W GKL S   V H PE V+GL+ +    T G+L +F+ A +WMR  +P        L A++E  +    SRKK+  +R    D  W+ ER+ A  N+ RD L+N   L+   P    + ++ADAS  +WG  +TQ+   +L   L     +H PL FLSG F G+   W T++ E+F ++ + +R+ Y        + D RN  Y+F P                                      W ++   + A P        RRVA +                                            E   LL+  G++    DA V +  + V+   G                      M  D++ FV+ CL Y  + A   +PRP G+ +  T+  D+LHFD+LS+ E E          G  +V VL D +S +V L   +  + +     +      F V + + SD G HF  QV+  + S L   HHF ++   W++GT++ +NR V+K+++A+ SER+   + WP  L  VQ ALNS+  +R+G  TPL   T  P
Sbjct:  266 GAHVFFVLDWFRGDCQLPLHPDSQEYFTFVTHRGMYTPTRVPTGATDAVAYCQGVVEEILGDLLGNGILCWLGDILGYAADATALMELLDKVLARCEEYGLKLLAKKCQFFATEVMWCGKLISAQGVMHCPERVQGLIGIPLSRTAGELQQFICAITWMRRGIPEYNRPTGDLYAVLERAMILAGSRKKQKLNRFLLIDAGWS-ERDTACLNAVRDALLNMLPLAHPSPT-AEVCLYADASQAYWGAVVTQIDPSKLQ--LPLEKQNHRPLDFLSGRFAGASSRWATIEMEAFASVESTRRLEYLLLRPRG-YTDHRNLVYMFDPYGSDGTMARYRADKLQRWALSLMSFKYVIEHVPGEVNAWGNLLSLWGAGPVFPTESIARRVARLAVVDRVSPLQEFEFVWRSEGEIRTLQQDTQYQEQARAAGVNWDDERALLLSPNGQVLIPPDATVLQQRLCVIAHAGAGGHRGAKTTAAALSEVFVWATMPADVSTFVQGCLHYMVT-AGGKIPRPHGETLVATKPNDLLHFDFLSMLEGE---------DGSKYVFVLKDGMSGYVELVPCIDATSDQTYASLLDWFKRFGVVRLWVSDQGAHFKNQVIARLQSALGAHHHFTLSYTPWTNGTVKVVNREVLKSVKALLSERKLQTTYWPRVLPVVQVALNSMPSDRLGGATPLTAFTALP 940          
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Match: A0A6A3J5U5_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3J5U5_9STRA)

HSP 1 Score: 244 bits (624), Expect = 1.330e-65
Identity = 216/820 (26.34%), Postives = 341/820 (41.59%), Query Frame = 0
Query:   10 KYAGAVAFCTLACLQGYWQCPLAEGVGEYFTFVTGNCLFTPTRVPQGVMNATSYFQGVIMEVLGNLVGRACLIYVGDVQVIGR-----------------ECGLFLAAHKLVLFAKEVKWRGKLYSGMAVRHDPECVRGLVEMRRPETVGKLMKFLQATSWMRLSLPHMAEVVTPLRALMEHRLNRTSRKKKMASRRAQTDGDWTPEREEAWDNSRDMLMNAFELSFQRPDECRMLMFADASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRGSQLCWPTVDKESFETLSTFQRVPY--RQGDSLNIFCDPRNFAYIFCPPI--------------------------------LWRDVEQGFV----------------------------------------AAPRR------VACMHEPVHLLAVKGEI---KDRQDAVARDPVEVVTPLG---------------------NMEKDIAKFVRECLPYTDSKADIAMPRPLGDLVHGTEVGDVLHFDYLSLGENEAINTGGLVDGGYTHVLVLMDDVSRFVWLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAVQWALNSVYRERMG-TTPLHMMTGRPLATVMSVL------------------AGEDGQENFRRDVVK---RVREQRERVR---EVSGRGYLQVFEVDDYVLVARVRKPGHVPKLVQTWTGPWRVVPGGSKHVRVVEYFVPGETKDVHVVRMRPYVDLSL 683
            K  GA  F T    +G+WQ  L     E+F+F+T + ++TPTRVPQG  ++  +FQ  + EV  +++    LI+V D+ V  R                 + GL L A K  LFA+E+ W G+L  G  VRHDPE V  L  +  P T   L + L A +W+R S+   A    PL+  +E      SRKK+ A   + T   W+   +E +      +  + +LSF   D   + +  DAS+  W   ++QV   +   GL  TD +HE +    G F+G+QL W   +KE +  +   + + Y   + +   +FCD  N   IFCP                                  +W  +   +V                                        AA +R      +A +     LL V+G +    + +D + R  V VV   G                     ++ K +  FV  CL     K  + + RP  +        +VLHFDYL +GE+          G   ++LVL D+++ F  L      +  VAA  V      + +P  + SD GTHF   +M  +  RL+V+H F +    W +GT+ER+NR +++ +R +  E +     W   L  VQ  LN      +G   PL + TG  + T +  +                    ED    +R  +      V++++ER R    ++ RG L+ F V DYVL +RV +     KL+  W GP+RV     +   ++E+ + G+T  VH  R++ + D S+
Sbjct:  207 KVKGAYYFATFDLFKGFWQLMLHPDCQEFFSFITNDTVYTPTRVPQGATDSPIHFQNQMQEVFRDMLYDNVLIWVDDIVVFARTVEEFLAVLKKFFERLRQYGLKLNAKKSCLFAREISWCGRLIDGTGVRHDPERVDALCSLPLPATAADLQRLLCAANWLRESIVDFARHAAPLQEKLEAAFAGRSRKKRYAEGLSLT---WSAPEQEQFQVFLQCVARSTKLSFPSEDAV-VCVTTDASDRGWSLIVSQVEHWDDGKGL--TDQAHELILCKGGSFKGAQLHWSIAEKEGYPIIKAAKDLEYLLHRTNGFKLFCDHANLIQIFCPHTEIRKHVRGKLQRWALMLSDYRYEIEHVKGEDNIWAGIVSRWVHSVPTESSVKTVRTRASSAVSRLRLLCDDDFVWPTADHVMAAQQRFRRRAPIAAVPSSDGLLLVEGRVWLPTEAKDLMQR--VLVVAHCGLCAHRGADVMQRQIQQHFHVKSLGKLVQDFVAACLLCKHVKGGLIIQRPWSEHREPAARNEVLHFDYLFMGESY---------GTTCYLLVLKDELTHFCELIPCDSPTSSVAASAVLDWAKRYGLPAMWTSDNGTHFKNTLMENLRERLKVLHTFVLVYTPWVNGTVERLNRDILQVMRVLLLEYQLDTKSWEYLLPLVQANLNQTPVASLGGKAPLELFTGLQVPTQLDTMLIPRSMQTKDKLMTIDLEVVEDELHEWRESLQAMHAEVKDRKERTRLYQSMAKRGKLENFTVGDYVLWSRVDERLRGNKLMVRWVGPYRVTEA-REFSFMIEHLLTGDTLGVHGSRLKFFDDASM 1008          
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Match: A0A6A3J1E7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3J1E7_9STRA)

HSP 1 Score: 227 bits (578), Expect = 1.430e-60
Identity = 194/689 (28.16%), Postives = 292/689 (42.38%), Query Frame = 0
Query:   13 GAVAFCTLACLQGYWQCPLAEGVGEYFTFVTGNCLFTPTRVPQGVMNATSYFQGVIMEVLGNLVGRACLIYVGDV---------------QVIGR--ECGLFLAAHKLVLFAKEVKWRGKLYSGMAVRHDPECVRGLVEMRRPETVGKLMKFLQATSWMRLSLPHMAEVVTPLRALMEHRLNRT-SRKKKMASRRAQTDGDWTPEREEAWDNSRDMLMNAFELSFQRPDECRMLMFADASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRGSQLCWPTVDKESFETLSTFQRVPYRQGDSLNIFCDPRNFAYIFCP-----------------------------------PILWRDVEQGFVAAP-----------------RRVACMHEPVHLLAVKGEIKD-RQDAVARDPVE------------VVTPLGN-------------------------------------------MEKDIAKFVRECLPYTDSKADIAMPRPLGDLVHGTEVGDVLHFDYLSLGENEAINTGGLVDGGYTHVLVLMDDVSRFVWLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAVQWALNSVYRERMG-TTPLHMMTGRP 574
            GA  F  L   +G  Q PL     EYFTFVT   ++TPTRVP G  +A +Y QGV+ E+LG+L+G   L ++GD+               +V+ R  E GL L A K   FA EV W GKL S   V H PE V+GL+ +    T G+L +FL A +WMR  +P    +   L A++E  +    SRKK+  +R    D  W+                      +    C  L  ADAS  +WG  +TQ+   +L   L     +H PL FL+G F G+   W T++KE+F  + + +R+ Y        + D RN  Y+F P                                      W ++   + A P                  RV+ + E   +   +GEI+  +QD   ++               +++P G                                            M  D++ FV+ CL +    A   +PRP G+ +  T+  ++LHFD+LS+ E E          G  +V VL D +S +V L   +  + +     +      F V + + SD G HF  QV+  + S L   HHF ++   W++GT++ +NR V+K+++A+ SER+   + WP  L  VQ ALNS+   R+G  TPL   T  P
Sbjct:   31 GAHVFFVLDWFRGDCQLPLHPDSQEYFTFVTHRGMYTPTRVPTGATDAVAYCQGVVEEILGDLLGNGILCWLGDILGYAADATALMELLDKVLARCEEYGLKLLAKKCQFFATEVMWCGKLISAQGVMHCPERVQGLIGIPLSRTAGELQQFLCAITWMRRGIPEYNRLTGDLYAVLERAMILAGSRKKQKLNRFLLVDAGWS----------------------EMDTAC--LNAADASQAYWGAVVTQIDPSKLQ--LPLEKQNHRPLDFLTGRFAGASSRWATIEKEAFAIVESTRRLEYLLLRPRG-YTDHRNLVYMFDPYGSDGTMARYRADKLQRWALSLMSFKYVIEHVPGEVNAWGNLLSLWGAGPVFPTESTARRVARLAVVDRVSPLQEFEFVWPAEGEIRTLQQDTQYQEQARAAGVNWDDERALLLSPTGQVLIPPDATVLQQRLCVIAHAGAGGHRGAKTTAAALSEVFLWATMPADVSTFVQGCL-HCMVTAGGKIPRPHGETLVATKPNELLHFDFLSMLEGE---------DGSKYVFVLKDGMSGYVELVPCIDAASDQTYASLLDWFKRFGVVRLWVSDQGAHFKNQVIVRLQSALGAHHHFTLSYTPWTNGTVKVVNREVLKSVKALLSERKLQTTYWPRVLPVVQVALNSMPSGRLGGATPLTAFTALP 682          
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Match: H3H7W2_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7W2_PHYRM)

HSP 1 Score: 229 bits (583), Expect = 1.780e-60
Identity = 200/717 (27.89%), Postives = 309/717 (43.10%), Query Frame = 0
Query:   13 GAVAFCTLACLQGYWQCPLAEGVGEYFTFVTGNCLFTPTRVPQGVMNATSYFQGVIMEVLGNLVGRACLIYVGDV--------------QVIGREC---GLFLAAHKLVLFAKEVKWRGKLYSGMAVRHDPECVRGLVEMRRPETVGKLMKFLQATSWMRLSLPHMAEVVTPLRALMEHRLNRT-SRKKKMASRRAQTDGDWTPEREEAWDNSRDMLMNAFELSFQRPDECRMLMFADASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRGSQLCWPTVDKESFETLSTFQRVPYRQGDSLNIFCDPRNFAYIFCPPILWRDVEQGFVAAPRRVACMHEPVHLLAVKGEIKDRQDAVARDPVEVVTPLGNMEKDIAKFVRECLPYTDSKADIAMPRPLGDLVHGTEVGDVLHFDYLSLGENEAINTGGLVDGGYTHVLVLMDDVSRFVWLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAVQWALNSVYRERMG-TTPLHMMTGRPL-ATVMSVL------------AGEDGQENFR----------RDVVKRVREQRERVREVSGRGY---LQVFEVDDYVLVARVR-KPGHVPKLVQTWTGPWRVVPGGSKHV-RVVEYFVPGETKDVHVVRMRPYVDLS 682
            GA  F  L   +GYWQ PL     E ++FVT   ++TPTRVP G  +A +Y Q V+ E+ G+L+G + L  + D+                +   C   GL L A K   F++E+KW G++ SG  VRH P+ + GLV+M+ P T G+L +FL A +WMR S+P    + T L   +E       SRKK   SR    +  W      + +     L+    L+  +     + ++ DAS   WG  LTQ+                EP   +   +R     W +V +   E L        RQ                         +++  V  P   A + + + ++A  G    R        +  +     +E D++ FV ECL +  + A   +PRP G+ +  T+  ++LHFD+L++ E          DG   +VLV+ D++S +V L        + A   +      F V   + SD G HF  +V+  +   L   HHF  A   W++GT+E +NR ++K+I+A+ SE R    +WP  L  VQ ALN++  +R+G  TPL   T  P  A + S+L               + Q + R           ++V     +R   RE   R     LQ F   D+VL A    + GH  KL   W GP R+V   + +   V +   P      H  R++ Y D +
Sbjct:  190 GAKVFFVLDWFRGYWQLPLHPDSQELYSFVTHRGIYTPTRVPMGATDAVAYCQCVVEEIFGDLLGVSVLALLADILGFAEDDDALLDVLDTVLERCEKFGLKLHAKKCQFFSREIKWCGRMISGDGVRHCPDRIHGLVDMQMPTTAGELQQFLCAVNWMRQSIPEFTRITTKLYDALERAAQHAGSRKKLKLSRVRLEEVGWGEAEISSLEAIWGCLLRMVPLAHPKAT-AELALYTDASQDHWGAILTQL----------------EPTEQVPRDWR-----WLSVSRHDGEDLDGAVWNAERQ----------------------LMMIDEARVGIPAGAAELQQRLCVIARAGASGHRGAQTTIRALGAIFYWRTLEADVSTFVVECL-HCMTTAGGRIPRPYGETLKATKPNELLHFDFLTMVEG---------DGDAKYVLVVKDNMSGYVELIACAPADADQAYHGLMDRFKRFGVVLLWVSDQGAHFKNEVVNKLQRALGAHHHFKTAYTPWANGTVEVVNREILKSIKALLSELRLHVRDWPAILPVVQAALNAMPADRLGGKTPLTAFTALPGGAQLHSILHPREPVDASIEWVDSEVQRHLRYVRVALDAMHTEMVNASERRRRAARERHARRQGVRLQKFSEGDFVLAATATGRSGH--KLALVWRGPMRIVRALNDYTFEVQDIIAPFAISIRHASRLQLYRDAA 850          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7F6_9PHAE7.850e-15036.34Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5A5_9PHAE1.060e-13334.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCX8_9PHAE4.060e-8734.34Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JVS6_9PHAE8.250e-7742.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0G4J7H8_PLABS2.930e-7225.56Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A6G0MV46_9STRA3.870e-6927.23Uncharacterized protein n=1 Tax=Phytophthora fraga... [more]
A0A6G0QQ04_9STRA4.480e-6729.86Integrase catalytic domain-containing protein n=5 ... [more]
A0A6A3J5U5_9STRA1.330e-6526.34Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
A0A6A3J1E7_9STRA1.430e-6028.16Uncharacterized protein n=1 Tax=Phytophthora rubi ... [more]
H3H7W2_PHYRM1.780e-6027.89Uncharacterized protein n=2 Tax=Phytophthora ramor... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 430..524
e-value: 5.2E-9
score: 36.3
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 395..574
score: 15.212
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 411..610
e-value: 1.2E-27
score: 98.4
NoneNo IPR availableGENE3D3.10.20.370coord: 218..316
e-value: 1.3E-13
score: 53.2
NoneNo IPR availableGENE3D3.10.10.10coord: 32..58
e-value: 2.6E-10
score: 42.0
NoneNo IPR availableGENE3D3.30.70.270coord: 10..93
e-value: 2.6E-10
score: 42.0
NoneNo IPR availableGENE3D3.30.70.270coord: 133..217
e-value: 1.3E-13
score: 53.2
NoneNo IPR availablePANTHERPTHR24559:SF275coord: 372..678
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 372..678
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 12..320
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 227..318
e-value: 8.7E-8
score: 32.4
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 412..576

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1112contigF-serratus_M_contig1112:297765..300074 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1112.1063.1mRNA_F-serratus_M_contig1112.1063.1Fucus serratus malemRNAF-serratus_M_contig1112 297765..300074 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1112.1063.1 ID=prot_F-serratus_M_contig1112.1063.1|Name=mRNA_F-serratus_M_contig1112.1063.1|organism=Fucus serratus male|type=polypeptide|length=683bp
MRNPEIKGEKYAGAVAFCTLACLQGYWQCPLAEGVGEYFTFVTGNCLFTP
TRVPQGVMNATSYFQGVIMEVLGNLVGRACLIYVGDVQVIGRECGLFLAA
HKLVLFAKEVKWRGKLYSGMAVRHDPECVRGLVEMRRPETVGKLMKFLQA
TSWMRLSLPHMAEVVTPLRALMEHRLNRTSRKKKMASRRAQTDGDWTPER
EEAWDNSRDMLMNAFELSFQRPDECRMLMFADASNLFWGCYLTQVPKKEL
VAGLSFTDMSHEPLAFLSGMFRGSQLCWPTVDKESFETLSTFQRVPYRQG
DSLNIFCDPRNFAYIFCPPILWRDVEQGFVAAPRRVACMHEPVHLLAVKG
EIKDRQDAVARDPVEVVTPLGNMEKDIAKFVRECLPYTDSKADIAMPRPL
GDLVHGTEVGDVLHFDYLSLGENEAINTGGLVDGGYTHVLVLMDDVSRFV
WLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRL
RVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAV
QWALNSVYRERMGTTPLHMMTGRPLATVMSVLAGEDGQENFRRDVVKRVR
EQRERVREVSGRGYLQVFEVDDYVLVARVRKPGHVPKLVQTWTGPWRVVP
GGSKHVRVVEYFVPGETKDVHVVRMRPYVDLSL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR036397RNaseH_sf
IPR041373RT_RNaseH
IPR012337RNaseH-like_sf