mRNA_F-serratus_M_contig1112.1063.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE) HSP 1 Score: 484 bits (1245), Expect = 7.850e-150 Identity = 302/831 (36.34%), Postives = 410/831 (49.34%), Query Frame = 1
Query: 1 MRNPEIKGEKYAGAVAFCTLACLQGYWQCPLAEGVGEYFTFVTGNCLFTPTRVPQGVMNATSYFQGVIMEVLGNLVGRACLIYVGDVQVIGR-----------------ECGLFLAAHKLVLFAKEVKWRGKLYSGMAVRHDPECVRGLVEMRRPETVGKLMKFLQATSWMRLSLPHMAEVVTPLRALME-HRLNRTSRKKKMASRRAQTDGDWTPEREEAWDNSRDMLMNAFELSFQRPDECRMLMFADASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRGSQLCWPTVDKESFETLSTFQRVPYRQGDSLNIFCDPRNFAYIFCPPIL-----------------------------------WRDVEQGFVAAP---RRVACMHEPVHL---LAVKGEIKDRQDAVAR----------DPVEVVTP-------------------------------------------------------LGNMEKDIAKFVRECLPYTDSKADIAMPRPLGDLVHGTEVGDVLHFDYLSLGENEAINTGGLVDG-GYTHVLVLMDDVSRFVWLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAVQWALNSVYRERMGTTPLHMMTGRPLATVMSVLAGEDG-----------------------QENFRRDVVKRVREQRERVREVSGRGYLQVFEVDDYVLVARVRKPGHVPKLVQTWTGPWRVVPGGSKHVRVVEYFVPGETKDVHVVRMRPYVDLSL 2049
M + E ++ + A + +L LQGYW PLA E FT + L++P RVPQGV+NATSY+QG + +L +L C+++V D+ G GLF+AAHK + VKW GK+YS + HD + + GL +RRPET G+LM+FLQA +W+R SLP M+E+V PLR +E H +R K++AS RA WTP E+W+ ++DM+ NA L + +LMF DAS+ WG ++TQVP+ E+ + DMSHEPL FLSG FRGSQL W TVDKE F +STF+R+ Y ++I D RN AYIF P W D+ +V P R A + P L K I++ Q V D + V P M++D+ +FV++CL DSK+ +PRP G+ VHG G+VLHFDYL +G++ + GL + GY ++LV+MDD+S F W++ C+ + A+ + C + VP+ + SD THF VM + L V F VAN WS+GT ERM R +V+T++AV ERRR +W + AVQWALN+ YRER +TP H+M GR T S LA G Q + V ++V R R R + RG L F V DYV+VARVR+ G PKL TWTGPWRVV KHV V+ V G+ +DVHV R+R Y D L
Sbjct: 732 MPDLEADMQRLSRATCYGSLDMLQGYWGMPLAPEAQEIFTMIGPGGLYSPERVPQGVLNATSYYQGTMNSILHDL---NCIVWVDDIVYWGETEEDLLNTLDLILARFEHHGLFVAAHKCTFYTTSVKWCGKVYSKGVIEHDRDRLSGLANLRRPETAGELMQFLQAVNWLRTSLPRMSEIVAPLREFLELHMAGNPNRTKRVASNRAIAPDAWTPAMVESWERAQDMVANAVTLYHPVAGKA-VLMFPDASDEHWGSFVTQVPQSEVDNNVPVEDMSHEPLGFLSGTFRGSQLRWATVDKEGFAIISTFRRLEYLLWGGVHIHTDHRNLAYIFDPEACISTVPKTTAQRLENWKAVLGQYDYTIQHISGERNCWGDLLSRWVNVPAVSNRSAAVFMPSTPDCNLPSKNAIREVQQTVRASVGDTNACFTDTLGRVAPDDEGLFRVMIDGRKVLWIPDTARDMQLRLMLCAHMKEAGHRGVTATMHRLREYCCWSTMDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDATKLKQQVQNVIQTQAVLHKQVQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSEL 1558
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE) HSP 1 Score: 441 bits (1134), Expect = 1.060e-133 Identity = 292/835 (34.97%), Postives = 401/835 (48.02%), Query Frame = 1
Query: 1 MRNPEIKGEKYAGAVAFCTLACLQGYWQCPLAEGVGEYFTFVTGNCLFTPTRVPQGVMNATSYFQGVIMEVLGNLVGRACLIYVGDVQVIGRE-----------------CGLFLAAHKLVLFAKEVKWRGKLYSGMAVRHDPECVRGLVEMRRPETVGKLMKFLQATSWMRLSLPHMAEVVTPLRALME-HRLNRTSRKKKMASRRAQTDGDWTPEREEAWDNSRDMLMNAFELSFQRPDECRMLMFADASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRGSQLC-WPTVDKESFETLSTFQRVPYRQGDSLNIFCDPRNFAYIFCPPIL-----------------------------------WRDVEQGFVAAPR---RVACMH---EPVHLLAVKGEIKDRQDAVA--------------------------------------------------------------RDPVEVVTPLGN------MEKDIAKFVRECLPYTDSKADIAMPRPLGDLVHGTEVGDVLHFDYLSLGENEAINTGGL-VDGGYTHVLVLMDDVSRFVWLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAVQWALNSVYRERMGTTPLHMMTGRPLATVMSVLAGEDG-----------------------QENFRRDVVKRVREQRERVREVSGRGYLQVFEVDDYVLVARVRKPGHVPKLVQTWTGPWRVVPGGSKHVRVVEYFVPGETKDVHVVRMRPYVDLSL 2049
M NPE + + A + +L LQ YWQCPLA E FT T L+TP RVPQG++NATSYFQ + +L G C ++V DV G + GL++AAHK F + W GK+YS V HDPE + GL MRRPET G+LM+FLQA +W+R SLP MAEVV PLR +E H + SR K++A RA TP EAW ++D++ A LS P C +LMF DAS+ WG +LTQVP+ +L G+ DM+HEP+ FLSG F+G+Q W TVDKE + +STF+R+ Y DS++IF D RN AYIF P W D+ +V+ P R A ++ EP + K ++D Q A R V + L ME+ + FV++CL DSKA +PRPLG+ VHGT G+V+HFDYL +G + + GL + G+ ++LV+MDD+S +VWL+ C+ + A+ + C VP+ + SD +HF +M + + L V +F VAN WS+GT ERM R VV+T++A+ E R +W + AVQWALN+ +RER G+TP H+M GR T +S LA G Q + ++V+ +V+ R + R + G L F V DYV+VA R HV V+ V GE +DVHV R+R Y D +L
Sbjct: 830 MPNPEASIAQLSAAKFYGSLDLLQWYWQCPLAPEAQEIFTIATPGGLYTPKRVPQGILNATSYFQATLTRILD---GLNCFVWVDDVVYWGMDKDDLLDTLDLILDRLEGAGLYVAAHKCTFFETSITWCGKVYSEGQVEHDPERLSGLATMRRPETAGELMQFLQAVNWLRTSLPRMAEVVWPLRVFLEQHLVGAKSRTKRVAENRAIAADALTPALVEAWTAAQDLVARAVALSHPSPG-CAVLMFPDASDEHWGSFLTQVPQDQLDRGVPVEDMAHEPMGFLSGTFKGAQQQRWATVDKEGYAIVSTFKRLEYLLWDSVHIFTDHRNLAYIFDPEACVSAVAKTTAQRLDQWKAVLGQYDYTIRHISGERNCWGDLLSRWVSVPSVSVRAAAVYAPSEPDAAMPSKQVVRDAQQAARSKLGALAGPASSFSTAVGTATLDAEGLFRVGMNGRDVLWIPDQASALQVRLMVCAHMKEAGHRGAVATLQRLSEYCCWFRMEEHVTDFVKQCLHCMDSKAGEKVPRPLGETVHGTRPGEVVHFDYLYVGASGPLGDDGLDEEEGFKYILVMMDDMSNWVWLEPTGACTACLTAQHLLTWCKILGVPEVWVSDTASHFKNHMMAALETALGVDRNFSVANSPWSNGTCERMMREVVRTLKAMIQEERGRTRDWVDLVPAVQWALNTAFRERYGSTPYHVMFGRAPRTALSTLASSTGAEWKVDVLDEKSLRLKVQHVVEAQRHLHKEVLDKVQASRSKHRASARVGSLPDFVVGDYVIVAAERL-----------------------HVYGVQNIVSGEVRDVHVARLRFYADAAL 1637
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Match: A0A6H5JCX8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX8_9PHAE) HSP 1 Score: 297 bits (761), Expect = 4.060e-87 Identity = 194/565 (34.34%), Postives = 271/565 (47.96%), Query Frame = 1
Query: 397 VEMRRPETVG-KLMKFLQATSWMRLSLPHMAEVVTPLRALME-HRLNRTSRKKKMASRRAQTDGDWTPEREEAWDNSRDMLMNAFELSFQRPDECRMLMFADASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRGSQLCWPTVDKESFETLSTFQRVPYRQGDSLNIFCDPRNFAYIFCPPIL-----------------------------------WRDVEQGFVAAP---RRVACMHEPVHL---LAVKGEIKDRQDAVAR----------DPVEVVTP-------------------------------------------------------LGNMEKDIAKFVRECLPYTDSKADIAMPRPLGDLVHGTEVGDVLHFDYLSLGENEAINTGGLVDG-GYTHVLVLMDDVSRFVWLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAVQWALNSVYRERMGTTPLHMMTGRPLATVMSVLAGEDGQ 1764
+E+R +T G + + A +W+R SLP M+E+V PLR +E H +R K++AS RA WTP E+W+ ++DM+ NA L + +LMF DAS+ WG ++TQVP+ E+ + DMSHEPL FLSG FRGSQL W TVDKE F +STF+R+ Y ++I D RN AYIF P W D+ +V P R A + P L K I++ Q V D + V P M++D+ +FV++CL DSK+ +PRP G+ VHG G+VLHFDYL +G++ + GL + GY ++LV+MDD+S F W++ C+ + A+ + C + VP+ + SD THF VM + L V F VAN WS+GT ERM R +V+T++AV ERRR +W + AVQWALN+ YRER +TP H+M GR T S LA G+
Sbjct: 101 MEVRGVDTPGFHEARRISAVNWLRTSLPRMSEIVAPLREFLELHMAGNPNRTKRVASNRAIAPDAWTPAMVESWERAQDMVANAVTLYHPVAGKA-VLMFPDASDEHWGSFVTQVPQSEVDNNVPVEDMSHEPLGFLSGTFRGSQLRWATVDKEGFAIISTFRRLEYLLWGGVHIHTDHRNLAYIFDPEACISTVPKTTAQRLENWKAVLGQYDYTIQHISGERNCWGDLLSRWVNVPAVSNRSAAVFMPSTPDCNLPSKNAIREVQQTVRASVGDTNACFTDTLGRVAPDDEGLFRVMIDGRKVLWIPDTARDMQLRLMLCAHMKEAGHRGVTATMHRLREYCCWSTMDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGE 664
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE) HSP 1 Score: 261 bits (668), Expect = 8.250e-77 Identity = 141/335 (42.09%), Postives = 190/335 (56.72%), Query Frame = 1
Query: 1117 MEKDIAKFVRECLPYTDSKADIAMPRPLGDLVHGTEVGDVLHFDYLSLGENEAINTGGLVDG-GYTHVLVLMDDVSRFVWLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAVQWALNSVYRERMGTTPLHMMTGRPLATVMSVLAGEDG-----------------------QENFRRDVVKRVREQRERVREVSGRGYLQVFEVDDYVLVARVRKPGHVPKLVQTWTGPWRVVPGGSKHVRVVEYFVPGETKDVHVVRMRPYVDLSL 2049
M++D+ +FV++CL DSK+ +PRP G+ VHG G+VLHFDYL +G++ + GL + GY ++LV+MDD+S F W++ C+ + A+ + C + VP+ + SD THF VM + L V F VAN WS+GT ERM R VV+T++AV ERRR +W + AVQWALN+ YRER +TP H+M GR T S LA G Q + + ++V R R R + RG L F V DYV+VARVR+ G PKL TWTGPWRVV KHV V+ V G+ +DVHV R+R Y D L
Sbjct: 1 MDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREVVRTMKAVLQERRRNLRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDATKLKQQVQNVIQTQAVLHKQIQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSEL 335
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Match: A0A0G4J7H8_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J7H8_PLABS) HSP 1 Score: 264 bits (675), Expect = 2.930e-72 Identity = 216/845 (25.56%), Postives = 350/845 (41.42%), Query Frame = 1
Query: 1 MRNPEIKGEKYAGAVAFCTLACLQGYWQCPLAEGVGEYFTFVTGNCLFTPTRVPQGVMNATSYFQGVIMEVLGNLVGRACLIYVGDVQVIGRE--------------CG---LFLAAHKLVLFAKEVKWRGKLYSGMAVRHDPECVRGLVEMRRPETVGKLMKFLQATSWMRLSLPHMAEVVTPLRALMEHRLNRTSR--------KKKMASRRAQTDGDWTPEREEAWDNSRDMLMNAFELSFQRPDECRMLMFADASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRGSQLCWPTVDKESFETLSTFQRVPYRQGDSLNI--FCDPRNFAYIFCPPI-------------------------------------------------------------------------------------------------------LWRDVEQGFVAAPRRVACMHEPVHLLAV--KGEIKDRQDAVARDPVEVVTPLGNMEKDIAKFVRECLPYTDSKADIAMPRPLGDLVHGTEVGDVLHFDYLSLGENEAINTGGLVDGGYTHVLVLMDDVSRFVWLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAVQWALNSVYRERM-GTTPLHMMTG------------------RPLAT---VMSVLAGEDGQENFRRDV--------VKRVREQRERVREVSGRGYLQVFEVDDYVLVARVRKPGHVPKLVQTWTGPWRVVPGGSKHVRVVEYFVPGETKDVHVVRMRPYVDLSL 2049
M N E K G F T+ +G+W PLA+ E F+F+T + ++TPTR QG MN+ FQ + + ++ LI++ D+ R CG L L K LFA+E+KW G++YS +RHDPE + L+ M +P T+ L +FL A +WMR S+P A +V PL+A+++ R + AS D W +A+++ R L+N +L++ +PD + +F DAS + W +TQ+P++++ L + HEPLAF F GS+L WP V+KE+ + +R + S +CD RN YIF P LW+ + G P V C + +L + G R VA+ + +++KD+ + ++C+ ++ +PRPLG+ +HG V+ DYL + E + D Y ++LV+ DD S +V L + AA + + A FE P+ +DGG+HFT +V++ +S + HH +A W++GT+ER NR V+ +R++ SE + WP VQ A+N +R+ G P ++TG RP++ VM + + + + V V+++ R+++ ++ DYVL A+ G KL W GP+RVV + V +E + + H R+R Y D L
Sbjct: 237 MPNVEAATRKLNGMTCFFTIDAHKGFWLMPLAKECQEIFSFMTDDAVYTPTRSIQGGMNSALQFQARVARIFDDMQDHL-LIWIDDLLGFARSEAELLAQLSLVLERCGERNLKLNPTKCTLFARELKWCGRIYSKDGIRHDPERIESLMNMPQPTTIKDLQQFLWAANWMRTSVPGYAHIVGPLQAIIDEAHAELRRIQPDLRNVQSSSASSMGLIDLGWNTVHSQAFEDLRFALINHVQLAYPKPDY-QTCLFTDASEVAWSAVITQIPREDIA--LPVHEQRHEPLAFYGKRFSGSELRWPIVEKEAAAIIYATERGDFLLQTSRPFLTYCDHRNLTYIFNPDSEVKKHTAQKLQRWALHLQGFDYEIREISGVDNVWADLLTRWGSGRIALKCRTTRLLKMDNLRATPRKHPDFSWPTEQEIRDSQRLLTREEKIEDGIFFDDTDRLWKSTD-GATLIPIHVGCRSLRLRILIIGHSGSAGHRASEVAKQTIMSRFCWPDIDKDVEQMCQQCIHCITTRGGRKVPRPLGEALHGQRPFQVMAMDYLYV---EPVRG---TDHPYKYILVMKDDYSGYVRLVPCQGATSRAAADAINQWIADFETPEYLVTDGGSHFTAEVIKELSRLREIQHHITLAYCPWANGTVERANRTVLNMLRSILSEAQISTHNWPYLCPVVQHAINHAPSKRLAGNAPYTVITGNQPESPLDHIWDPAADQFRPVSAESVVMYLAEMQVALDELHKAVDDAKTAQHAANVQQRARRLKKYQSESFIP----GDYVLNAKAVL-GPAQKLAAHWRGPYRVVRRINDQVYELEDILTSRRFEAHTQRIRRYADEDL 1065
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Match: A0A6G0MV46_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0MV46_9STRA) HSP 1 Score: 251 bits (642), Expect = 3.870e-69 Identity = 211/775 (27.23%), Postives = 336/775 (43.35%), Query Frame = 1
Query: 28 KYAGAVAFCTLACLQGYWQCPLAEGVGEYFTFVTGNCLFTPTRVPQGVMNATSYFQGVIMEVLGNLVGRACLIYVGDVQVIGR-----------------ECGLFLAAHKLVLFAKEVKWRGKLYSGMAVRHDPECVRGLVEMRRPETVGKLMKFLQATSWMRLSLPHMAEVVTPLRALMEHRLNRTSRKKKMASRRAQTDGDWTPEREEAWDNSRDMLMNAFELSFQRPDECRMLMFADASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRGSQLCWPTVDKESFETLSTFQRVPY--RQGDSLNIFCDPRNFAYIFCPPI--------------------------------LWRDVEQGFV------------------AAPR-RVACMHEPV-----HLLAVKGEIKDRQDAVARDPVE-VVTPLGNMEKDIAKFVRECLPYTDSKADIAMPRPLGDLVHGTEVGDVLHFDYLSLGENEAINTGGLVDGGYTHVLVLMDDVSRFVWLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAVQWALNSVYRERMG-TTPLHMMTGRPLATVMSVL------------------AGEDGQENFRRDVVK---RVREQRERVR---EVSGRGYLQVFEVDDYVLVARVRKPGHVPKLVQTWTGPWRVVPGGSKHVRVVEYFVPGETKDVHVVRMRPYVDLSL 2049
K GA F T +G+WQ L E+F+F+T + ++TPTRVPQG ++ +FQ + EV +++ LI+V D+ V R + GL L A K LFA+E+ W G+L G VRHDPE V L + P T L + L A +W+R S+ A PL+ +E SRKK+ A + T W+ +E + + + +LSF D + + DAS+ W ++QV + GL TD +HE + G F+G+QL W +KE + + + + Y + + +FCD N IFCP +W D+ +V A R R C + V H++A + + R + A + ++ G + +D FV CL K + + RP + +VLHFDYL +GE+ G ++LVL D+++ F L + VAA V + +P + SD GT+F +M + RL+V+H F W GT+E +NR +++ +R + E + W L VQ LN +G PL + TG + T + + ED +R + V++++ER R ++ RG L+ F V DYVL +RV + KL+ W GP+RV + ++E+ + G+T +VH R++ + D S+
Sbjct: 10 KVKGAYFFATFDLFKGFWQLMLHPDCQEFFSFITNDTVYTPTRVPQGATDSPIHFQNQMQEVFRDMLYDNVLIWVDDIVVFARTVEEFLAVLKKFFERLRQYGLKLNAKKSCLFAREISWCGRLIDGTGVRHDPERVDALCSLPLPATAADLQRLLCAANWLRESIVDFARHAAPLQEKLEAAFAGRSRKKRYAEGLSLT---WSAPEQEQFQVFLQCVARSTKLSFPSEDAV-VCVTTDASDRGWSLIVSQVEHWDDGKGL--TDQAHELILCKGGSFKGAQLHWSIAEKEGYPIIKAAKGLEYLLHRTNGFKLFCDHANLIQIFCPHTEIRKHVRGKLQRWALMLSDYRYEIEHVKGEDNIWADIVSRWVHSVPTESSVKTVRTRASSAVSRLRPLCDDDFVWPTADHVMAAQQRFRRRAPSAAVPSSDGLLLVEGRLVQD---FVAACLLCKHVKGGLIIQRPWSEHREPAARNEVLHFDYLFMGESY---------GTTCYLLVLKDELTHFCELIPCDSPTSSVAAAAVLDWAKRYGLPAMWTSDNGTYFKNTLMENLRERLKVLHTFVPVYTPWVDGTVEHLNRDILQVMRVLLLEYQLDTKSWEYLLPLVQANLNQTPVASLGGKAPLVLFTGLQVPTQLDTMLIPRSMQTKDKLMTIDLEVVEDELHEWRESLQAMHAEVKDRKERTRLYQSMAKRGKLENFTVGDYVLWSRVDERLRGNKLMVRWVGPYRVTEA-REFSFMIEHLLTGDTLEVHGSRLKFFDDASM 765
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Match: A0A6G0QQ04_9STRA (Integrase catalytic domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6G0QQ04_9STRA) HSP 1 Score: 248 bits (634), Expect = 4.480e-67 Identity = 206/690 (29.86%), Postives = 306/690 (44.35%), Query Frame = 1
Query: 37 GAVAFCTLACLQGYWQCPLAEGVGEYFTFVTGNCLFTPTRVPQGVMNATSYFQGVIMEVLGNLVGRACLIYVGDV---------------QVIGR--ECGLFLAAHKLVLFAKEVKWRGKLYSGMAVRHDPECVRGLVEMRRPETVGKLMKFLQATSWMRLSLPHMAEVVTPLRALMEHRLNRT-SRKKKMASRRAQTDGDWTPEREEAWDNS-RDMLMNAFELSFQRPDECRMLMFADASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRGSQLCWPTVDKESFETLSTFQRVPYRQGDSLNIFCDPRNFAYIFCP-----------------------------------PILWRDVEQGFVAAP--------RRVACM-------------------------------------------HEPVHLLAVKGEIKDRQDA-VARDPVEVVTPLG---------------------NMEKDIAKFVRECLPYTDSKADIAMPRPLGDLVHGTEVGDVLHFDYLSLGENEAINTGGLVDGGYTHVLVLMDDVSRFVWLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAVQWALNSVYRERMG-TTPLHMMTGRP 1722
GA F L +G Q PL EYFTFVT ++TPTRVP G +A +Y QGV+ E+LG+L+G L ++GD+ +V+ R E GL L A K FA EV W GKL S V H PE V+GL+ + T G+L +F+ A +WMR +P L A++E + SRKK+ +R D W+ ER+ A N+ RD L+N L+ P + ++ADAS +WG +TQ+ +L L +H PL FLSG F G+ W T++ E+F ++ + +R+ Y + D RN Y+F P W ++ + A P RRVA + E LL+ G++ DA V + + V+ G M D++ FV+ CL Y + A +PRP G+ + T+ D+LHFD+LS+ E E G +V VL D +S +V L + + + + F V + + SD G HF QV+ + S L HHF ++ W++GT++ +NR V+K+++A+ SER+ + WP L VQ ALNS+ +R+G TPL T P
Sbjct: 266 GAHVFFVLDWFRGDCQLPLHPDSQEYFTFVTHRGMYTPTRVPTGATDAVAYCQGVVEEILGDLLGNGILCWLGDILGYAADATALMELLDKVLARCEEYGLKLLAKKCQFFATEVMWCGKLISAQGVMHCPERVQGLIGIPLSRTAGELQQFICAITWMRRGIPEYNRPTGDLYAVLERAMILAGSRKKQKLNRFLLIDAGWS-ERDTACLNAVRDALLNMLPLAHPSPT-AEVCLYADASQAYWGAVVTQIDPSKLQ--LPLEKQNHRPLDFLSGRFAGASSRWATIEMEAFASVESTRRLEYLLLRPRG-YTDHRNLVYMFDPYGSDGTMARYRADKLQRWALSLMSFKYVIEHVPGEVNAWGNLLSLWGAGPVFPTESIARRVARLAVVDRVSPLQEFEFVWRSEGEIRTLQQDTQYQEQARAAGVNWDDERALLLSPNGQVLIPPDATVLQQRLCVIAHAGAGGHRGAKTTAAALSEVFVWATMPADVSTFVQGCLHYMVT-AGGKIPRPHGETLVATKPNDLLHFDFLSMLEGE---------DGSKYVFVLKDGMSGYVELVPCIDATSDQTYASLLDWFKRFGVVRLWVSDQGAHFKNQVIARLQSALGAHHHFTLSYTPWTNGTVKVVNREVLKSVKALLSERKLQTTYWPRVLPVVQVALNSMPSDRLGGATPLTAFTALP 940
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Match: A0A6A3J5U5_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3J5U5_9STRA) HSP 1 Score: 244 bits (624), Expect = 1.330e-65 Identity = 216/820 (26.34%), Postives = 341/820 (41.59%), Query Frame = 1
Query: 28 KYAGAVAFCTLACLQGYWQCPLAEGVGEYFTFVTGNCLFTPTRVPQGVMNATSYFQGVIMEVLGNLVGRACLIYVGDVQVIGR-----------------ECGLFLAAHKLVLFAKEVKWRGKLYSGMAVRHDPECVRGLVEMRRPETVGKLMKFLQATSWMRLSLPHMAEVVTPLRALMEHRLNRTSRKKKMASRRAQTDGDWTPEREEAWDNSRDMLMNAFELSFQRPDECRMLMFADASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRGSQLCWPTVDKESFETLSTFQRVPY--RQGDSLNIFCDPRNFAYIFCPPI--------------------------------LWRDVEQGFV----------------------------------------AAPRR------VACMHEPVHLLAVKGEI---KDRQDAVARDPVEVVTPLG---------------------NMEKDIAKFVRECLPYTDSKADIAMPRPLGDLVHGTEVGDVLHFDYLSLGENEAINTGGLVDGGYTHVLVLMDDVSRFVWLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAVQWALNSVYRERMG-TTPLHMMTGRPLATVMSVL------------------AGEDGQENFRRDVVK---RVREQRERVR---EVSGRGYLQVFEVDDYVLVARVRKPGHVPKLVQTWTGPWRVVPGGSKHVRVVEYFVPGETKDVHVVRMRPYVDLSL 2049
K GA F T +G+WQ L E+F+F+T + ++TPTRVPQG ++ +FQ + EV +++ LI+V D+ V R + GL L A K LFA+E+ W G+L G VRHDPE V L + P T L + L A +W+R S+ A PL+ +E SRKK+ A + T W+ +E + + + +LSF D + + DAS+ W ++QV + GL TD +HE + G F+G+QL W +KE + + + + Y + + +FCD N IFCP +W + +V AA +R +A + LL V+G + + +D + R V VV G ++ K + FV CL K + + RP + +VLHFDYL +GE+ G ++LVL D+++ F L + VAA V + +P + SD GTHF +M + RL+V+H F + W +GT+ER+NR +++ +R + E + W L VQ LN +G PL + TG + T + + ED +R + V++++ER R ++ RG L+ F V DYVL +RV + KL+ W GP+RV + ++E+ + G+T VH R++ + D S+
Sbjct: 207 KVKGAYYFATFDLFKGFWQLMLHPDCQEFFSFITNDTVYTPTRVPQGATDSPIHFQNQMQEVFRDMLYDNVLIWVDDIVVFARTVEEFLAVLKKFFERLRQYGLKLNAKKSCLFAREISWCGRLIDGTGVRHDPERVDALCSLPLPATAADLQRLLCAANWLRESIVDFARHAAPLQEKLEAAFAGRSRKKRYAEGLSLT---WSAPEQEQFQVFLQCVARSTKLSFPSEDAV-VCVTTDASDRGWSLIVSQVEHWDDGKGL--TDQAHELILCKGGSFKGAQLHWSIAEKEGYPIIKAAKDLEYLLHRTNGFKLFCDHANLIQIFCPHTEIRKHVRGKLQRWALMLSDYRYEIEHVKGEDNIWAGIVSRWVHSVPTESSVKTVRTRASSAVSRLRLLCDDDFVWPTADHVMAAQQRFRRRAPIAAVPSSDGLLLVEGRVWLPTEAKDLMQR--VLVVAHCGLCAHRGADVMQRQIQQHFHVKSLGKLVQDFVAACLLCKHVKGGLIIQRPWSEHREPAARNEVLHFDYLFMGESY---------GTTCYLLVLKDELTHFCELIPCDSPTSSVAASAVLDWAKRYGLPAMWTSDNGTHFKNTLMENLRERLKVLHTFVLVYTPWVNGTVERLNRDILQVMRVLLLEYQLDTKSWEYLLPLVQANLNQTPVASLGGKAPLELFTGLQVPTQLDTMLIPRSMQTKDKLMTIDLEVVEDELHEWRESLQAMHAEVKDRKERTRLYQSMAKRGKLENFTVGDYVLWSRVDERLRGNKLMVRWVGPYRVTEA-REFSFMIEHLLTGDTLGVHGSRLKFFDDASM 1008
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Match: A0A6A3J1E7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3J1E7_9STRA) HSP 1 Score: 227 bits (578), Expect = 1.430e-60 Identity = 194/689 (28.16%), Postives = 292/689 (42.38%), Query Frame = 1
Query: 37 GAVAFCTLACLQGYWQCPLAEGVGEYFTFVTGNCLFTPTRVPQGVMNATSYFQGVIMEVLGNLVGRACLIYVGDV---------------QVIGR--ECGLFLAAHKLVLFAKEVKWRGKLYSGMAVRHDPECVRGLVEMRRPETVGKLMKFLQATSWMRLSLPHMAEVVTPLRALMEHRLNRT-SRKKKMASRRAQTDGDWTPEREEAWDNSRDMLMNAFELSFQRPDECRMLMFADASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRGSQLCWPTVDKESFETLSTFQRVPYRQGDSLNIFCDPRNFAYIFCP-----------------------------------PILWRDVEQGFVAAP-----------------RRVACMHEPVHLLAVKGEIKD-RQDAVARDPVE------------VVTPLGN-------------------------------------------MEKDIAKFVRECLPYTDSKADIAMPRPLGDLVHGTEVGDVLHFDYLSLGENEAINTGGLVDGGYTHVLVLMDDVSRFVWLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAVQWALNSVYRERMG-TTPLHMMTGRP 1722
GA F L +G Q PL EYFTFVT ++TPTRVP G +A +Y QGV+ E+LG+L+G L ++GD+ +V+ R E GL L A K FA EV W GKL S V H PE V+GL+ + T G+L +FL A +WMR +P + L A++E + SRKK+ +R D W+ + C L ADAS +WG +TQ+ +L L +H PL FL+G F G+ W T++KE+F + + +R+ Y + D RN Y+F P W ++ + A P RV+ + E + +GEI+ +QD ++ +++P G M D++ FV+ CL + A +PRP G+ + T+ ++LHFD+LS+ E E G +V VL D +S +V L + + + + F V + + SD G HF QV+ + S L HHF ++ W++GT++ +NR V+K+++A+ SER+ + WP L VQ ALNS+ R+G TPL T P
Sbjct: 31 GAHVFFVLDWFRGDCQLPLHPDSQEYFTFVTHRGMYTPTRVPTGATDAVAYCQGVVEEILGDLLGNGILCWLGDILGYAADATALMELLDKVLARCEEYGLKLLAKKCQFFATEVMWCGKLISAQGVMHCPERVQGLIGIPLSRTAGELQQFLCAITWMRRGIPEYNRLTGDLYAVLERAMILAGSRKKQKLNRFLLVDAGWS----------------------EMDTAC--LNAADASQAYWGAVVTQIDPSKLQ--LPLEKQNHRPLDFLTGRFAGASSRWATIEKEAFAIVESTRRLEYLLLRPRG-YTDHRNLVYMFDPYGSDGTMARYRADKLQRWALSLMSFKYVIEHVPGEVNAWGNLLSLWGAGPVFPTESTARRVARLAVVDRVSPLQEFEFVWPAEGEIRTLQQDTQYQEQARAAGVNWDDERALLLSPTGQVLIPPDATVLQQRLCVIAHAGAGGHRGAKTTAAALSEVFLWATMPADVSTFVQGCL-HCMVTAGGKIPRPHGETLVATKPNELLHFDFLSMLEGE---------DGSKYVFVLKDGMSGYVELVPCIDAASDQTYASLLDWFKRFGVVRLWVSDQGAHFKNQVIVRLQSALGAHHHFTLSYTPWTNGTVKVVNREVLKSVKALLSERKLQTTYWPRVLPVVQVALNSMPSGRLGGATPLTAFTALP 682
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Match: H3H7W2_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7W2_PHYRM) HSP 1 Score: 229 bits (583), Expect = 1.780e-60 Identity = 200/717 (27.89%), Postives = 309/717 (43.10%), Query Frame = 1
Query: 37 GAVAFCTLACLQGYWQCPLAEGVGEYFTFVTGNCLFTPTRVPQGVMNATSYFQGVIMEVLGNLVGRACLIYVGDV--------------QVIGREC---GLFLAAHKLVLFAKEVKWRGKLYSGMAVRHDPECVRGLVEMRRPETVGKLMKFLQATSWMRLSLPHMAEVVTPLRALMEHRLNRT-SRKKKMASRRAQTDGDWTPEREEAWDNSRDMLMNAFELSFQRPDECRMLMFADASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRGSQLCWPTVDKESFETLSTFQRVPYRQGDSLNIFCDPRNFAYIFCPPILWRDVEQGFVAAPRRVACMHEPVHLLAVKGEIKDRQDAVARDPVEVVTPLGNMEKDIAKFVRECLPYTDSKADIAMPRPLGDLVHGTEVGDVLHFDYLSLGENEAINTGGLVDGGYTHVLVLMDDVSRFVWLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAVQWALNSVYRERMG-TTPLHMMTGRPL-ATVMSVL------------AGEDGQENFR----------RDVVKRVREQRERVREVSGRGY---LQVFEVDDYVLVARVR-KPGHVPKLVQTWTGPWRVVPGGSKHV-RVVEYFVPGETKDVHVVRMRPYVDLS 2046
GA F L +GYWQ PL E ++FVT ++TPTRVP G +A +Y Q V+ E+ G+L+G + L + D+ + C GL L A K F++E+KW G++ SG VRH P+ + GLV+M+ P T G+L +FL A +WMR S+P + T L +E SRKK SR + W + + L+ L+ + + ++ DAS WG LTQ+ EP + +R W +V + E L RQ +++ V P A + + + ++A G R + + +E D++ FV ECL + + A +PRP G+ + T+ ++LHFD+L++ E DG +VLV+ D++S +V L + A + F V + SD G HF +V+ + L HHF A W++GT+E +NR ++K+I+A+ SE R +WP L VQ ALN++ +R+G TPL T P A + S+L + Q + R ++V +R RE R LQ F D+VL A + GH KL W GP R+V + + V + P H R++ Y D +
Sbjct: 190 GAKVFFVLDWFRGYWQLPLHPDSQELYSFVTHRGIYTPTRVPMGATDAVAYCQCVVEEIFGDLLGVSVLALLADILGFAEDDDALLDVLDTVLERCEKFGLKLHAKKCQFFSREIKWCGRMISGDGVRHCPDRIHGLVDMQMPTTAGELQQFLCAVNWMRQSIPEFTRITTKLYDALERAAQHAGSRKKLKLSRVRLEEVGWGEAEISSLEAIWGCLLRMVPLAHPKAT-AELALYTDASQDHWGAILTQL----------------EPTEQVPRDWR-----WLSVSRHDGEDLDGAVWNAERQ----------------------LMMIDEARVGIPAGAAELQQRLCVIARAGASGHRGAQTTIRALGAIFYWRTLEADVSTFVVECL-HCMTTAGGRIPRPYGETLKATKPNELLHFDFLTMVEG---------DGDAKYVLVVKDNMSGYVELIACAPADADQAYHGLMDRFKRFGVVLLWVSDQGAHFKNEVVNKLQRALGAHHHFKTAYTPWANGTVEVVNREILKSIKALLSELRLHVRDWPAILPVVQAALNAMPADRLGGKTPLTAFTALPGGAQLHSILHPREPVDASIEWVDSEVQRHLRYVRVALDAMHTEMVNASERRRRAARERHARRQGVRLQKFSEGDFVLAATATGRSGH--KLALVWRGPMRIVRALNDYTFEVQDIIAPFAISIRHASRLQLYRDAA 850 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1112.1063.1 >prot_F-serratus_M_contig1112.1063.1 ID=prot_F-serratus_M_contig1112.1063.1|Name=mRNA_F-serratus_M_contig1112.1063.1|organism=Fucus serratus male|type=polypeptide|length=683bp MRNPEIKGEKYAGAVAFCTLACLQGYWQCPLAEGVGEYFTFVTGNCLFTPback to top mRNA from alignment at F-serratus_M_contig1112:297765..300074- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1112.1063.1 ID=mRNA_F-serratus_M_contig1112.1063.1|Name=mRNA_F-serratus_M_contig1112.1063.1|organism=Fucus serratus male|type=mRNA|length=2310bp|location=Sequence derived from alignment at F-serratus_M_contig1112:297765..300074- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1112:297765..300074- >mRNA_F-serratus_M_contig1112.1063.1 ID=mRNA_F-serratus_M_contig1112.1063.1|Name=mRNA_F-serratus_M_contig1112.1063.1|organism=Fucus serratus male|type=CDS|length=4098bp|location=Sequence derived from alignment at F-serratus_M_contig1112:297765..300074- (Fucus serratus male)back to top |