mRNA_F-serratus_M_contig1112.1063.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1112.1063.1
Unique NamemRNA_F-serratus_M_contig1112.1063.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 484 bits (1245), Expect = 7.850e-150
Identity = 302/831 (36.34%), Postives = 410/831 (49.34%), Query Frame = 1
Query:    1 MRNPEIKGEKYAGAVAFCTLACLQGYWQCPLAEGVGEYFTFVTGNCLFTPTRVPQGVMNATSYFQGVIMEVLGNLVGRACLIYVGDVQVIGR-----------------ECGLFLAAHKLVLFAKEVKWRGKLYSGMAVRHDPECVRGLVEMRRPETVGKLMKFLQATSWMRLSLPHMAEVVTPLRALME-HRLNRTSRKKKMASRRAQTDGDWTPEREEAWDNSRDMLMNAFELSFQRPDECRMLMFADASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRGSQLCWPTVDKESFETLSTFQRVPYRQGDSLNIFCDPRNFAYIFCPPIL-----------------------------------WRDVEQGFVAAP---RRVACMHEPVHL---LAVKGEIKDRQDAVAR----------DPVEVVTP-------------------------------------------------------LGNMEKDIAKFVRECLPYTDSKADIAMPRPLGDLVHGTEVGDVLHFDYLSLGENEAINTGGLVDG-GYTHVLVLMDDVSRFVWLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAVQWALNSVYRERMGTTPLHMMTGRPLATVMSVLAGEDG-----------------------QENFRRDVVKRVREQRERVREVSGRGYLQVFEVDDYVLVARVRKPGHVPKLVQTWTGPWRVVPGGSKHVRVVEYFVPGETKDVHVVRMRPYVDLSL 2049
            M + E   ++ + A  + +L  LQGYW  PLA    E FT +    L++P RVPQGV+NATSY+QG +  +L +L    C+++V D+   G                    GLF+AAHK   +   VKW GK+YS   + HD + + GL  +RRPET G+LM+FLQA +W+R SLP M+E+V PLR  +E H     +R K++AS RA     WTP   E+W+ ++DM+ NA  L      +  +LMF DAS+  WG ++TQVP+ E+   +   DMSHEPL FLSG FRGSQL W TVDKE F  +STF+R+ Y     ++I  D RN AYIF P                                      W D+   +V  P    R A +  P      L  K  I++ Q  V            D +  V P                                                          M++D+ +FV++CL   DSK+   +PRP G+ VHG   G+VLHFDYL +G++  +   GL +  GY ++LV+MDD+S F W++    C+  + A+ +   C +  VP+ + SD  THF   VM  +   L V   F VAN  WS+GT ERM R +V+T++AV  ERRR   +W   + AVQWALN+ YRER  +TP H+M GR   T  S LA   G                       Q    + V ++V   R R R  + RG L  F V DYV+VARVR+ G  PKL  TWTGPWRVV    KHV  V+  V G+ +DVHV R+R Y D  L
Sbjct:  732 MPDLEADMQRLSRATCYGSLDMLQGYWGMPLAPEAQEIFTMIGPGGLYSPERVPQGVLNATSYYQGTMNSILHDL---NCIVWVDDIVYWGETEEDLLNTLDLILARFEHHGLFVAAHKCTFYTTSVKWCGKVYSKGVIEHDRDRLSGLANLRRPETAGELMQFLQAVNWLRTSLPRMSEIVAPLREFLELHMAGNPNRTKRVASNRAIAPDAWTPAMVESWERAQDMVANAVTLYHPVAGKA-VLMFPDASDEHWGSFVTQVPQSEVDNNVPVEDMSHEPLGFLSGTFRGSQLRWATVDKEGFAIISTFRRLEYLLWGGVHIHTDHRNLAYIFDPEACISTVPKTTAQRLENWKAVLGQYDYTIQHISGERNCWGDLLSRWVNVPAVSNRSAAVFMPSTPDCNLPSKNAIREVQQTVRASVGDTNACFTDTLGRVAPDDEGLFRVMIDGRKVLWIPDTARDMQLRLMLCAHMKEAGHRGVTATMHRLREYCCWSTMDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDATKLKQQVQNVIQTQAVLHKQVQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSEL 1558          
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 441 bits (1134), Expect = 1.060e-133
Identity = 292/835 (34.97%), Postives = 401/835 (48.02%), Query Frame = 1
Query:    1 MRNPEIKGEKYAGAVAFCTLACLQGYWQCPLAEGVGEYFTFVTGNCLFTPTRVPQGVMNATSYFQGVIMEVLGNLVGRACLIYVGDVQVIGRE-----------------CGLFLAAHKLVLFAKEVKWRGKLYSGMAVRHDPECVRGLVEMRRPETVGKLMKFLQATSWMRLSLPHMAEVVTPLRALME-HRLNRTSRKKKMASRRAQTDGDWTPEREEAWDNSRDMLMNAFELSFQRPDECRMLMFADASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRGSQLC-WPTVDKESFETLSTFQRVPYRQGDSLNIFCDPRNFAYIFCPPIL-----------------------------------WRDVEQGFVAAPR---RVACMH---EPVHLLAVKGEIKDRQDAVA--------------------------------------------------------------RDPVEVVTPLGN------MEKDIAKFVRECLPYTDSKADIAMPRPLGDLVHGTEVGDVLHFDYLSLGENEAINTGGL-VDGGYTHVLVLMDDVSRFVWLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAVQWALNSVYRERMGTTPLHMMTGRPLATVMSVLAGEDG-----------------------QENFRRDVVKRVREQRERVREVSGRGYLQVFEVDDYVLVARVRKPGHVPKLVQTWTGPWRVVPGGSKHVRVVEYFVPGETKDVHVVRMRPYVDLSL 2049
            M NPE    + + A  + +L  LQ YWQCPLA    E FT  T   L+TP RVPQG++NATSYFQ  +  +L    G  C ++V DV   G +                  GL++AAHK   F   + W GK+YS   V HDPE + GL  MRRPET G+LM+FLQA +W+R SLP MAEVV PLR  +E H +   SR K++A  RA      TP   EAW  ++D++  A  LS   P  C +LMF DAS+  WG +LTQVP+ +L  G+   DM+HEP+ FLSG F+G+Q   W TVDKE +  +STF+R+ Y   DS++IF D RN AYIF P                                      W D+   +V+ P    R A ++   EP   +  K  ++D Q A                                                                R  V  +  L        ME+ +  FV++CL   DSKA   +PRPLG+ VHGT  G+V+HFDYL +G +  +   GL  + G+ ++LV+MDD+S +VWL+    C+  + A+ +   C    VP+ + SD  +HF   +M  + + L V  +F VAN  WS+GT ERM R VV+T++A+  E R    +W   + AVQWALN+ +RER G+TP H+M GR   T +S LA   G                       Q +  ++V+ +V+  R + R  +  G L  F V DYV+VA  R                        HV  V+  V GE +DVHV R+R Y D +L
Sbjct:  830 MPNPEASIAQLSAAKFYGSLDLLQWYWQCPLAPEAQEIFTIATPGGLYTPKRVPQGILNATSYFQATLTRILD---GLNCFVWVDDVVYWGMDKDDLLDTLDLILDRLEGAGLYVAAHKCTFFETSITWCGKVYSEGQVEHDPERLSGLATMRRPETAGELMQFLQAVNWLRTSLPRMAEVVWPLRVFLEQHLVGAKSRTKRVAENRAIAADALTPALVEAWTAAQDLVARAVALSHPSPG-CAVLMFPDASDEHWGSFLTQVPQDQLDRGVPVEDMAHEPMGFLSGTFKGAQQQRWATVDKEGYAIVSTFKRLEYLLWDSVHIFTDHRNLAYIFDPEACVSAVAKTTAQRLDQWKAVLGQYDYTIRHISGERNCWGDLLSRWVSVPSVSVRAAAVYAPSEPDAAMPSKQVVRDAQQAARSKLGALAGPASSFSTAVGTATLDAEGLFRVGMNGRDVLWIPDQASALQVRLMVCAHMKEAGHRGAVATLQRLSEYCCWFRMEEHVTDFVKQCLHCMDSKAGEKVPRPLGETVHGTRPGEVVHFDYLYVGASGPLGDDGLDEEEGFKYILVMMDDMSNWVWLEPTGACTACLTAQHLLTWCKILGVPEVWVSDTASHFKNHMMAALETALGVDRNFSVANSPWSNGTCERMMREVVRTLKAMIQEERGRTRDWVDLVPAVQWALNTAFRERYGSTPYHVMFGRAPRTALSTLASSTGAEWKVDVLDEKSLRLKVQHVVEAQRHLHKEVLDKVQASRSKHRASARVGSLPDFVVGDYVIVAAERL-----------------------HVYGVQNIVSGEVRDVHVARLRFYADAAL 1637          
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Match: A0A6H5JCX8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX8_9PHAE)

HSP 1 Score: 297 bits (761), Expect = 4.060e-87
Identity = 194/565 (34.34%), Postives = 271/565 (47.96%), Query Frame = 1
Query:  397 VEMRRPETVG-KLMKFLQATSWMRLSLPHMAEVVTPLRALME-HRLNRTSRKKKMASRRAQTDGDWTPEREEAWDNSRDMLMNAFELSFQRPDECRMLMFADASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRGSQLCWPTVDKESFETLSTFQRVPYRQGDSLNIFCDPRNFAYIFCPPIL-----------------------------------WRDVEQGFVAAP---RRVACMHEPVHL---LAVKGEIKDRQDAVAR----------DPVEVVTP-------------------------------------------------------LGNMEKDIAKFVRECLPYTDSKADIAMPRPLGDLVHGTEVGDVLHFDYLSLGENEAINTGGLVDG-GYTHVLVLMDDVSRFVWLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAVQWALNSVYRERMGTTPLHMMTGRPLATVMSVLAGEDGQ 1764
            +E+R  +T G    + + A +W+R SLP M+E+V PLR  +E H     +R K++AS RA     WTP   E+W+ ++DM+ NA  L      +  +LMF DAS+  WG ++TQVP+ E+   +   DMSHEPL FLSG FRGSQL W TVDKE F  +STF+R+ Y     ++I  D RN AYIF P                                      W D+   +V  P    R A +  P      L  K  I++ Q  V            D +  V P                                                          M++D+ +FV++CL   DSK+   +PRP G+ VHG   G+VLHFDYL +G++  +   GL +  GY ++LV+MDD+S F W++    C+  + A+ +   C +  VP+ + SD  THF   VM  +   L V   F VAN  WS+GT ERM R +V+T++AV  ERRR   +W   + AVQWALN+ YRER  +TP H+M GR   T  S LA   G+
Sbjct:  101 MEVRGVDTPGFHEARRISAVNWLRTSLPRMSEIVAPLREFLELHMAGNPNRTKRVASNRAIAPDAWTPAMVESWERAQDMVANAVTLYHPVAGKA-VLMFPDASDEHWGSFVTQVPQSEVDNNVPVEDMSHEPLGFLSGTFRGSQLRWATVDKEGFAIISTFRRLEYLLWGGVHIHTDHRNLAYIFDPEACISTVPKTTAQRLENWKAVLGQYDYTIQHISGERNCWGDLLSRWVNVPAVSNRSAAVFMPSTPDCNLPSKNAIREVQQTVRASVGDTNACFTDTLGRVAPDDEGLFRVMIDGRKVLWIPDTARDMQLRLMLCAHMKEAGHRGVTATMHRLREYCCWSTMDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGE 664          
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE)

HSP 1 Score: 261 bits (668), Expect = 8.250e-77
Identity = 141/335 (42.09%), Postives = 190/335 (56.72%), Query Frame = 1
Query: 1117 MEKDIAKFVRECLPYTDSKADIAMPRPLGDLVHGTEVGDVLHFDYLSLGENEAINTGGLVDG-GYTHVLVLMDDVSRFVWLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAVQWALNSVYRERMGTTPLHMMTGRPLATVMSVLAGEDG-----------------------QENFRRDVVKRVREQRERVREVSGRGYLQVFEVDDYVLVARVRKPGHVPKLVQTWTGPWRVVPGGSKHVRVVEYFVPGETKDVHVVRMRPYVDLSL 2049
            M++D+ +FV++CL   DSK+   +PRP G+ VHG   G+VLHFDYL +G++  +   GL +  GY ++LV+MDD+S F W++    C+  + A+ +   C +  VP+ + SD  THF   VM  +   L V   F VAN  WS+GT ERM R VV+T++AV  ERRR   +W   + AVQWALN+ YRER  +TP H+M GR   T  S LA   G                       Q    + + ++V   R R R  + RG L  F V DYV+VARVR+ G  PKL  TWTGPWRVV    KHV  V+  V G+ +DVHV R+R Y D  L
Sbjct:    1 MDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREVVRTMKAVLQERRRNLRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDATKLKQQVQNVIQTQAVLHKQIQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSEL 335          
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Match: A0A0G4J7H8_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J7H8_PLABS)

HSP 1 Score: 264 bits (675), Expect = 2.930e-72
Identity = 216/845 (25.56%), Postives = 350/845 (41.42%), Query Frame = 1
Query:    1 MRNPEIKGEKYAGAVAFCTLACLQGYWQCPLAEGVGEYFTFVTGNCLFTPTRVPQGVMNATSYFQGVIMEVLGNLVGRACLIYVGDVQVIGRE--------------CG---LFLAAHKLVLFAKEVKWRGKLYSGMAVRHDPECVRGLVEMRRPETVGKLMKFLQATSWMRLSLPHMAEVVTPLRALMEHRLNRTSR--------KKKMASRRAQTDGDWTPEREEAWDNSRDMLMNAFELSFQRPDECRMLMFADASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRGSQLCWPTVDKESFETLSTFQRVPYRQGDSLNI--FCDPRNFAYIFCPPI-------------------------------------------------------------------------------------------------------LWRDVEQGFVAAPRRVACMHEPVHLLAV--KGEIKDRQDAVARDPVEVVTPLGNMEKDIAKFVRECLPYTDSKADIAMPRPLGDLVHGTEVGDVLHFDYLSLGENEAINTGGLVDGGYTHVLVLMDDVSRFVWLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAVQWALNSVYRERM-GTTPLHMMTG------------------RPLAT---VMSVLAGEDGQENFRRDV--------VKRVREQRERVREVSGRGYLQVFEVDDYVLVARVRKPGHVPKLVQTWTGPWRVVPGGSKHVRVVEYFVPGETKDVHVVRMRPYVDLSL 2049
            M N E    K  G   F T+   +G+W  PLA+   E F+F+T + ++TPTR  QG MN+   FQ  +  +  ++     LI++ D+    R               CG   L L   K  LFA+E+KW G++YS   +RHDPE +  L+ M +P T+  L +FL A +WMR S+P  A +V PL+A+++       R        +   AS     D  W     +A+++ R  L+N  +L++ +PD  +  +F DAS + W   +TQ+P++++   L   +  HEPLAF    F GS+L WP V+KE+   +   +R  +    S     +CD RN  YIF P                                                                                                         LW+  + G    P  V C    + +L +   G    R   VA+  +       +++KD+ +  ++C+    ++    +PRPLG+ +HG     V+  DYL +   E +      D  Y ++LV+ DD S +V L      +   AA  + +  A FE P+   +DGG+HFT +V++ +S    + HH  +A   W++GT+ER NR V+  +R++ SE +     WP     VQ A+N    +R+ G  P  ++TG                  RP++    VM +   +   +   + V           V+++  R+++     ++      DYVL A+    G   KL   W GP+RVV   +  V  +E  +     + H  R+R Y D  L
Sbjct:  237 MPNVEAATRKLNGMTCFFTIDAHKGFWLMPLAKECQEIFSFMTDDAVYTPTRSIQGGMNSALQFQARVARIFDDMQDHL-LIWIDDLLGFARSEAELLAQLSLVLERCGERNLKLNPTKCTLFARELKWCGRIYSKDGIRHDPERIESLMNMPQPTTIKDLQQFLWAANWMRTSVPGYAHIVGPLQAIIDEAHAELRRIQPDLRNVQSSSASSMGLIDLGWNTVHSQAFEDLRFALINHVQLAYPKPDY-QTCLFTDASEVAWSAVITQIPREDIA--LPVHEQRHEPLAFYGKRFSGSELRWPIVEKEAAAIIYATERGDFLLQTSRPFLTYCDHRNLTYIFNPDSEVKKHTAQKLQRWALHLQGFDYEIREISGVDNVWADLLTRWGSGRIALKCRTTRLLKMDNLRATPRKHPDFSWPTEQEIRDSQRLLTREEKIEDGIFFDDTDRLWKSTD-GATLIPIHVGCRSLRLRILIIGHSGSAGHRASEVAKQTIMSRFCWPDIDKDVEQMCQQCIHCITTRGGRKVPRPLGEALHGQRPFQVMAMDYLYV---EPVRG---TDHPYKYILVMKDDYSGYVRLVPCQGATSRAAADAINQWIADFETPEYLVTDGGSHFTAEVIKELSRLREIQHHITLAYCPWANGTVERANRTVLNMLRSILSEAQISTHNWPYLCPVVQHAINHAPSKRLAGNAPYTVITGNQPESPLDHIWDPAADQFRPVSAESVVMYLAEMQVALDELHKAVDDAKTAQHAANVQQRARRLKKYQSESFIP----GDYVLNAKAVL-GPAQKLAAHWRGPYRVVRRINDQVYELEDILTSRRFEAHTQRIRRYADEDL 1065          
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Match: A0A6G0MV46_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0MV46_9STRA)

HSP 1 Score: 251 bits (642), Expect = 3.870e-69
Identity = 211/775 (27.23%), Postives = 336/775 (43.35%), Query Frame = 1
Query:   28 KYAGAVAFCTLACLQGYWQCPLAEGVGEYFTFVTGNCLFTPTRVPQGVMNATSYFQGVIMEVLGNLVGRACLIYVGDVQVIGR-----------------ECGLFLAAHKLVLFAKEVKWRGKLYSGMAVRHDPECVRGLVEMRRPETVGKLMKFLQATSWMRLSLPHMAEVVTPLRALMEHRLNRTSRKKKMASRRAQTDGDWTPEREEAWDNSRDMLMNAFELSFQRPDECRMLMFADASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRGSQLCWPTVDKESFETLSTFQRVPY--RQGDSLNIFCDPRNFAYIFCPPI--------------------------------LWRDVEQGFV------------------AAPR-RVACMHEPV-----HLLAVKGEIKDRQDAVARDPVE-VVTPLGNMEKDIAKFVRECLPYTDSKADIAMPRPLGDLVHGTEVGDVLHFDYLSLGENEAINTGGLVDGGYTHVLVLMDDVSRFVWLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAVQWALNSVYRERMG-TTPLHMMTGRPLATVMSVL------------------AGEDGQENFRRDVVK---RVREQRERVR---EVSGRGYLQVFEVDDYVLVARVRKPGHVPKLVQTWTGPWRVVPGGSKHVRVVEYFVPGETKDVHVVRMRPYVDLSL 2049
            K  GA  F T    +G+WQ  L     E+F+F+T + ++TPTRVPQG  ++  +FQ  + EV  +++    LI+V D+ V  R                 + GL L A K  LFA+E+ W G+L  G  VRHDPE V  L  +  P T   L + L A +W+R S+   A    PL+  +E      SRKK+ A   + T   W+   +E +      +  + +LSF   D   + +  DAS+  W   ++QV   +   GL  TD +HE +    G F+G+QL W   +KE +  +   + + Y   + +   +FCD  N   IFCP                                  +W D+   +V                  A  R R  C  + V     H++A +   + R  + A    + ++   G + +D   FV  CL     K  + + RP  +        +VLHFDYL +GE+          G   ++LVL D+++ F  L      +  VAA  V      + +P  + SD GT+F   +M  +  RL+V+H F      W  GT+E +NR +++ +R +  E +     W   L  VQ  LN      +G   PL + TG  + T +  +                    ED    +R  +      V++++ER R    ++ RG L+ F V DYVL +RV +     KL+  W GP+RV     +   ++E+ + G+T +VH  R++ + D S+
Sbjct:   10 KVKGAYFFATFDLFKGFWQLMLHPDCQEFFSFITNDTVYTPTRVPQGATDSPIHFQNQMQEVFRDMLYDNVLIWVDDIVVFARTVEEFLAVLKKFFERLRQYGLKLNAKKSCLFAREISWCGRLIDGTGVRHDPERVDALCSLPLPATAADLQRLLCAANWLRESIVDFARHAAPLQEKLEAAFAGRSRKKRYAEGLSLT---WSAPEQEQFQVFLQCVARSTKLSFPSEDAV-VCVTTDASDRGWSLIVSQVEHWDDGKGL--TDQAHELILCKGGSFKGAQLHWSIAEKEGYPIIKAAKGLEYLLHRTNGFKLFCDHANLIQIFCPHTEIRKHVRGKLQRWALMLSDYRYEIEHVKGEDNIWADIVSRWVHSVPTESSVKTVRTRASSAVSRLRPLCDDDFVWPTADHVMAAQQRFRRRAPSAAVPSSDGLLLVEGRLVQD---FVAACLLCKHVKGGLIIQRPWSEHREPAARNEVLHFDYLFMGESY---------GTTCYLLVLKDELTHFCELIPCDSPTSSVAAAAVLDWAKRYGLPAMWTSDNGTYFKNTLMENLRERLKVLHTFVPVYTPWVDGTVEHLNRDILQVMRVLLLEYQLDTKSWEYLLPLVQANLNQTPVASLGGKAPLVLFTGLQVPTQLDTMLIPRSMQTKDKLMTIDLEVVEDELHEWRESLQAMHAEVKDRKERTRLYQSMAKRGKLENFTVGDYVLWSRVDERLRGNKLMVRWVGPYRVTEA-REFSFMIEHLLTGDTLEVHGSRLKFFDDASM 765          
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Match: A0A6G0QQ04_9STRA (Integrase catalytic domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6G0QQ04_9STRA)

HSP 1 Score: 248 bits (634), Expect = 4.480e-67
Identity = 206/690 (29.86%), Postives = 306/690 (44.35%), Query Frame = 1
Query:   37 GAVAFCTLACLQGYWQCPLAEGVGEYFTFVTGNCLFTPTRVPQGVMNATSYFQGVIMEVLGNLVGRACLIYVGDV---------------QVIGR--ECGLFLAAHKLVLFAKEVKWRGKLYSGMAVRHDPECVRGLVEMRRPETVGKLMKFLQATSWMRLSLPHMAEVVTPLRALMEHRLNRT-SRKKKMASRRAQTDGDWTPEREEAWDNS-RDMLMNAFELSFQRPDECRMLMFADASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRGSQLCWPTVDKESFETLSTFQRVPYRQGDSLNIFCDPRNFAYIFCP-----------------------------------PILWRDVEQGFVAAP--------RRVACM-------------------------------------------HEPVHLLAVKGEIKDRQDA-VARDPVEVVTPLG---------------------NMEKDIAKFVRECLPYTDSKADIAMPRPLGDLVHGTEVGDVLHFDYLSLGENEAINTGGLVDGGYTHVLVLMDDVSRFVWLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAVQWALNSVYRERMG-TTPLHMMTGRP 1722
            GA  F  L   +G  Q PL     EYFTFVT   ++TPTRVP G  +A +Y QGV+ E+LG+L+G   L ++GD+               +V+ R  E GL L A K   FA EV W GKL S   V H PE V+GL+ +    T G+L +F+ A +WMR  +P        L A++E  +    SRKK+  +R    D  W+ ER+ A  N+ RD L+N   L+   P    + ++ADAS  +WG  +TQ+   +L   L     +H PL FLSG F G+   W T++ E+F ++ + +R+ Y        + D RN  Y+F P                                      W ++   + A P        RRVA +                                            E   LL+  G++    DA V +  + V+   G                      M  D++ FV+ CL Y  + A   +PRP G+ +  T+  D+LHFD+LS+ E E          G  +V VL D +S +V L   +  + +     +      F V + + SD G HF  QV+  + S L   HHF ++   W++GT++ +NR V+K+++A+ SER+   + WP  L  VQ ALNS+  +R+G  TPL   T  P
Sbjct:  266 GAHVFFVLDWFRGDCQLPLHPDSQEYFTFVTHRGMYTPTRVPTGATDAVAYCQGVVEEILGDLLGNGILCWLGDILGYAADATALMELLDKVLARCEEYGLKLLAKKCQFFATEVMWCGKLISAQGVMHCPERVQGLIGIPLSRTAGELQQFICAITWMRRGIPEYNRPTGDLYAVLERAMILAGSRKKQKLNRFLLIDAGWS-ERDTACLNAVRDALLNMLPLAHPSPT-AEVCLYADASQAYWGAVVTQIDPSKLQ--LPLEKQNHRPLDFLSGRFAGASSRWATIEMEAFASVESTRRLEYLLLRPRG-YTDHRNLVYMFDPYGSDGTMARYRADKLQRWALSLMSFKYVIEHVPGEVNAWGNLLSLWGAGPVFPTESIARRVARLAVVDRVSPLQEFEFVWRSEGEIRTLQQDTQYQEQARAAGVNWDDERALLLSPNGQVLIPPDATVLQQRLCVIAHAGAGGHRGAKTTAAALSEVFVWATMPADVSTFVQGCLHYMVT-AGGKIPRPHGETLVATKPNDLLHFDFLSMLEGE---------DGSKYVFVLKDGMSGYVELVPCIDATSDQTYASLLDWFKRFGVVRLWVSDQGAHFKNQVIARLQSALGAHHHFTLSYTPWTNGTVKVVNREVLKSVKALLSERKLQTTYWPRVLPVVQVALNSMPSDRLGGATPLTAFTALP 940          
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Match: A0A6A3J5U5_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3J5U5_9STRA)

HSP 1 Score: 244 bits (624), Expect = 1.330e-65
Identity = 216/820 (26.34%), Postives = 341/820 (41.59%), Query Frame = 1
Query:   28 KYAGAVAFCTLACLQGYWQCPLAEGVGEYFTFVTGNCLFTPTRVPQGVMNATSYFQGVIMEVLGNLVGRACLIYVGDVQVIGR-----------------ECGLFLAAHKLVLFAKEVKWRGKLYSGMAVRHDPECVRGLVEMRRPETVGKLMKFLQATSWMRLSLPHMAEVVTPLRALMEHRLNRTSRKKKMASRRAQTDGDWTPEREEAWDNSRDMLMNAFELSFQRPDECRMLMFADASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRGSQLCWPTVDKESFETLSTFQRVPY--RQGDSLNIFCDPRNFAYIFCPPI--------------------------------LWRDVEQGFV----------------------------------------AAPRR------VACMHEPVHLLAVKGEI---KDRQDAVARDPVEVVTPLG---------------------NMEKDIAKFVRECLPYTDSKADIAMPRPLGDLVHGTEVGDVLHFDYLSLGENEAINTGGLVDGGYTHVLVLMDDVSRFVWLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAVQWALNSVYRERMG-TTPLHMMTGRPLATVMSVL------------------AGEDGQENFRRDVVK---RVREQRERVR---EVSGRGYLQVFEVDDYVLVARVRKPGHVPKLVQTWTGPWRVVPGGSKHVRVVEYFVPGETKDVHVVRMRPYVDLSL 2049
            K  GA  F T    +G+WQ  L     E+F+F+T + ++TPTRVPQG  ++  +FQ  + EV  +++    LI+V D+ V  R                 + GL L A K  LFA+E+ W G+L  G  VRHDPE V  L  +  P T   L + L A +W+R S+   A    PL+  +E      SRKK+ A   + T   W+   +E +      +  + +LSF   D   + +  DAS+  W   ++QV   +   GL  TD +HE +    G F+G+QL W   +KE +  +   + + Y   + +   +FCD  N   IFCP                                  +W  +   +V                                        AA +R      +A +     LL V+G +    + +D + R  V VV   G                     ++ K +  FV  CL     K  + + RP  +        +VLHFDYL +GE+          G   ++LVL D+++ F  L      +  VAA  V      + +P  + SD GTHF   +M  +  RL+V+H F +    W +GT+ER+NR +++ +R +  E +     W   L  VQ  LN      +G   PL + TG  + T +  +                    ED    +R  +      V++++ER R    ++ RG L+ F V DYVL +RV +     KL+  W GP+RV     +   ++E+ + G+T  VH  R++ + D S+
Sbjct:  207 KVKGAYYFATFDLFKGFWQLMLHPDCQEFFSFITNDTVYTPTRVPQGATDSPIHFQNQMQEVFRDMLYDNVLIWVDDIVVFARTVEEFLAVLKKFFERLRQYGLKLNAKKSCLFAREISWCGRLIDGTGVRHDPERVDALCSLPLPATAADLQRLLCAANWLRESIVDFARHAAPLQEKLEAAFAGRSRKKRYAEGLSLT---WSAPEQEQFQVFLQCVARSTKLSFPSEDAV-VCVTTDASDRGWSLIVSQVEHWDDGKGL--TDQAHELILCKGGSFKGAQLHWSIAEKEGYPIIKAAKDLEYLLHRTNGFKLFCDHANLIQIFCPHTEIRKHVRGKLQRWALMLSDYRYEIEHVKGEDNIWAGIVSRWVHSVPTESSVKTVRTRASSAVSRLRLLCDDDFVWPTADHVMAAQQRFRRRAPIAAVPSSDGLLLVEGRVWLPTEAKDLMQR--VLVVAHCGLCAHRGADVMQRQIQQHFHVKSLGKLVQDFVAACLLCKHVKGGLIIQRPWSEHREPAARNEVLHFDYLFMGESY---------GTTCYLLVLKDELTHFCELIPCDSPTSSVAASAVLDWAKRYGLPAMWTSDNGTHFKNTLMENLRERLKVLHTFVLVYTPWVNGTVERLNRDILQVMRVLLLEYQLDTKSWEYLLPLVQANLNQTPVASLGGKAPLELFTGLQVPTQLDTMLIPRSMQTKDKLMTIDLEVVEDELHEWRESLQAMHAEVKDRKERTRLYQSMAKRGKLENFTVGDYVLWSRVDERLRGNKLMVRWVGPYRVTEA-REFSFMIEHLLTGDTLGVHGSRLKFFDDASM 1008          
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Match: A0A6A3J1E7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3J1E7_9STRA)

HSP 1 Score: 227 bits (578), Expect = 1.430e-60
Identity = 194/689 (28.16%), Postives = 292/689 (42.38%), Query Frame = 1
Query:   37 GAVAFCTLACLQGYWQCPLAEGVGEYFTFVTGNCLFTPTRVPQGVMNATSYFQGVIMEVLGNLVGRACLIYVGDV---------------QVIGR--ECGLFLAAHKLVLFAKEVKWRGKLYSGMAVRHDPECVRGLVEMRRPETVGKLMKFLQATSWMRLSLPHMAEVVTPLRALMEHRLNRT-SRKKKMASRRAQTDGDWTPEREEAWDNSRDMLMNAFELSFQRPDECRMLMFADASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRGSQLCWPTVDKESFETLSTFQRVPYRQGDSLNIFCDPRNFAYIFCP-----------------------------------PILWRDVEQGFVAAP-----------------RRVACMHEPVHLLAVKGEIKD-RQDAVARDPVE------------VVTPLGN-------------------------------------------MEKDIAKFVRECLPYTDSKADIAMPRPLGDLVHGTEVGDVLHFDYLSLGENEAINTGGLVDGGYTHVLVLMDDVSRFVWLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAVQWALNSVYRERMG-TTPLHMMTGRP 1722
            GA  F  L   +G  Q PL     EYFTFVT   ++TPTRVP G  +A +Y QGV+ E+LG+L+G   L ++GD+               +V+ R  E GL L A K   FA EV W GKL S   V H PE V+GL+ +    T G+L +FL A +WMR  +P    +   L A++E  +    SRKK+  +R    D  W+                      +    C  L  ADAS  +WG  +TQ+   +L   L     +H PL FL+G F G+   W T++KE+F  + + +R+ Y        + D RN  Y+F P                                      W ++   + A P                  RV+ + E   +   +GEI+  +QD   ++               +++P G                                            M  D++ FV+ CL +    A   +PRP G+ +  T+  ++LHFD+LS+ E E          G  +V VL D +S +V L   +  + +     +      F V + + SD G HF  QV+  + S L   HHF ++   W++GT++ +NR V+K+++A+ SER+   + WP  L  VQ ALNS+   R+G  TPL   T  P
Sbjct:   31 GAHVFFVLDWFRGDCQLPLHPDSQEYFTFVTHRGMYTPTRVPTGATDAVAYCQGVVEEILGDLLGNGILCWLGDILGYAADATALMELLDKVLARCEEYGLKLLAKKCQFFATEVMWCGKLISAQGVMHCPERVQGLIGIPLSRTAGELQQFLCAITWMRRGIPEYNRLTGDLYAVLERAMILAGSRKKQKLNRFLLVDAGWS----------------------EMDTAC--LNAADASQAYWGAVVTQIDPSKLQ--LPLEKQNHRPLDFLTGRFAGASSRWATIEKEAFAIVESTRRLEYLLLRPRG-YTDHRNLVYMFDPYGSDGTMARYRADKLQRWALSLMSFKYVIEHVPGEVNAWGNLLSLWGAGPVFPTESTARRVARLAVVDRVSPLQEFEFVWPAEGEIRTLQQDTQYQEQARAAGVNWDDERALLLSPTGQVLIPPDATVLQQRLCVIAHAGAGGHRGAKTTAAALSEVFLWATMPADVSTFVQGCL-HCMVTAGGKIPRPHGETLVATKPNELLHFDFLSMLEGE---------DGSKYVFVLKDGMSGYVELVPCIDAASDQTYASLLDWFKRFGVVRLWVSDQGAHFKNQVIVRLQSALGAHHHFTLSYTPWTNGTVKVVNREVLKSVKALLSERKLQTTYWPRVLPVVQVALNSMPSGRLGGATPLTAFTALP 682          
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Match: H3H7W2_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7W2_PHYRM)

HSP 1 Score: 229 bits (583), Expect = 1.780e-60
Identity = 200/717 (27.89%), Postives = 309/717 (43.10%), Query Frame = 1
Query:   37 GAVAFCTLACLQGYWQCPLAEGVGEYFTFVTGNCLFTPTRVPQGVMNATSYFQGVIMEVLGNLVGRACLIYVGDV--------------QVIGREC---GLFLAAHKLVLFAKEVKWRGKLYSGMAVRHDPECVRGLVEMRRPETVGKLMKFLQATSWMRLSLPHMAEVVTPLRALMEHRLNRT-SRKKKMASRRAQTDGDWTPEREEAWDNSRDMLMNAFELSFQRPDECRMLMFADASNLFWGCYLTQVPKKELVAGLSFTDMSHEPLAFLSGMFRGSQLCWPTVDKESFETLSTFQRVPYRQGDSLNIFCDPRNFAYIFCPPILWRDVEQGFVAAPRRVACMHEPVHLLAVKGEIKDRQDAVARDPVEVVTPLGNMEKDIAKFVRECLPYTDSKADIAMPRPLGDLVHGTEVGDVLHFDYLSLGENEAINTGGLVDGGYTHVLVLMDDVSRFVWLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRLRVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAVQWALNSVYRERMG-TTPLHMMTGRPL-ATVMSVL------------AGEDGQENFR----------RDVVKRVREQRERVREVSGRGY---LQVFEVDDYVLVARVR-KPGHVPKLVQTWTGPWRVVPGGSKHV-RVVEYFVPGETKDVHVVRMRPYVDLS 2046
            GA  F  L   +GYWQ PL     E ++FVT   ++TPTRVP G  +A +Y Q V+ E+ G+L+G + L  + D+                +   C   GL L A K   F++E+KW G++ SG  VRH P+ + GLV+M+ P T G+L +FL A +WMR S+P    + T L   +E       SRKK   SR    +  W      + +     L+    L+  +     + ++ DAS   WG  LTQ+                EP   +   +R     W +V +   E L        RQ                         +++  V  P   A + + + ++A  G    R        +  +     +E D++ FV ECL +  + A   +PRP G+ +  T+  ++LHFD+L++ E          DG   +VLV+ D++S +V L        + A   +      F V   + SD G HF  +V+  +   L   HHF  A   W++GT+E +NR ++K+I+A+ SE R    +WP  L  VQ ALN++  +R+G  TPL   T  P  A + S+L               + Q + R           ++V     +R   RE   R     LQ F   D+VL A    + GH  KL   W GP R+V   + +   V +   P      H  R++ Y D +
Sbjct:  190 GAKVFFVLDWFRGYWQLPLHPDSQELYSFVTHRGIYTPTRVPMGATDAVAYCQCVVEEIFGDLLGVSVLALLADILGFAEDDDALLDVLDTVLERCEKFGLKLHAKKCQFFSREIKWCGRMISGDGVRHCPDRIHGLVDMQMPTTAGELQQFLCAVNWMRQSIPEFTRITTKLYDALERAAQHAGSRKKLKLSRVRLEEVGWGEAEISSLEAIWGCLLRMVPLAHPKAT-AELALYTDASQDHWGAILTQL----------------EPTEQVPRDWR-----WLSVSRHDGEDLDGAVWNAERQ----------------------LMMIDEARVGIPAGAAELQQRLCVIARAGASGHRGAQTTIRALGAIFYWRTLEADVSTFVVECL-HCMTTAGGRIPRPYGETLKATKPNELLHFDFLTMVEG---------DGDAKYVLVVKDNMSGYVELIACAPADADQAYHGLMDRFKRFGVVLLWVSDQGAHFKNEVVNKLQRALGAHHHFKTAYTPWANGTVEVVNREILKSIKALLSELRLHVRDWPAILPVVQAALNAMPADRLGGKTPLTAFTALPGGAQLHSILHPREPVDASIEWVDSEVQRHLRYVRVALDAMHTEMVNASERRRRAARERHARRQGVRLQKFSEGDFVLAATATGRSGH--KLALVWRGPMRIVRALNDYTFEVQDIIAPFAISIRHASRLQLYRDAA 850          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1112.1063.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7F6_9PHAE7.850e-15036.34Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5A5_9PHAE1.060e-13334.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCX8_9PHAE4.060e-8734.34Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JVS6_9PHAE8.250e-7742.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0G4J7H8_PLABS2.930e-7225.56Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A6G0MV46_9STRA3.870e-6927.23Uncharacterized protein n=1 Tax=Phytophthora fraga... [more]
A0A6G0QQ04_9STRA4.480e-6729.86Integrase catalytic domain-containing protein n=5 ... [more]
A0A6A3J5U5_9STRA1.330e-6526.34Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
A0A6A3J1E7_9STRA1.430e-6028.16Uncharacterized protein n=1 Tax=Phytophthora rubi ... [more]
H3H7W2_PHYRM1.780e-6027.89Uncharacterized protein n=2 Tax=Phytophthora ramor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1112contigF-serratus_M_contig1112:297765..300074 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score279.6
Seed ortholog evalue3.8e-72
Seed eggNOG ortholog164328.Phyra85588
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QEWS@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons4
Model size2049
Cds size2049
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1112.1063.1prot_F-serratus_M_contig1112.1063.1Fucus serratus malepolypeptideF-serratus_M_contig1112 297765..300074 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928998.638477-CDS-F-serratus_M_contig1112:297764..2980541622928998.638477-CDS-F-serratus_M_contig1112:297764..298054Fucus serratus maleCDSF-serratus_M_contig1112 297765..298054 -
1690962662.6459227-CDS-F-serratus_M_contig1112:297764..2980541690962662.6459227-CDS-F-serratus_M_contig1112:297764..298054Fucus serratus maleCDSF-serratus_M_contig1112 297765..298054 -
1622928998.6545713-CDS-F-serratus_M_contig1112:298129..2988521622928998.6545713-CDS-F-serratus_M_contig1112:298129..298852Fucus serratus maleCDSF-serratus_M_contig1112 298130..298852 -
1690962662.6583571-CDS-F-serratus_M_contig1112:298129..2988521690962662.6583571-CDS-F-serratus_M_contig1112:298129..298852Fucus serratus maleCDSF-serratus_M_contig1112 298130..298852 -
1622928998.6764162-CDS-F-serratus_M_contig1112:298987..2997481622928998.6764162-CDS-F-serratus_M_contig1112:298987..299748Fucus serratus maleCDSF-serratus_M_contig1112 298988..299748 -
1690962662.6672945-CDS-F-serratus_M_contig1112:298987..2997481690962662.6672945-CDS-F-serratus_M_contig1112:298987..299748Fucus serratus maleCDSF-serratus_M_contig1112 298988..299748 -
1622928998.693866-CDS-F-serratus_M_contig1112:299799..3000741622928998.693866-CDS-F-serratus_M_contig1112:299799..300074Fucus serratus maleCDSF-serratus_M_contig1112 299800..300074 -
1690962662.67725-CDS-F-serratus_M_contig1112:299799..3000741690962662.67725-CDS-F-serratus_M_contig1112:299799..300074Fucus serratus maleCDSF-serratus_M_contig1112 299800..300074 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1112.1063.1

>prot_F-serratus_M_contig1112.1063.1 ID=prot_F-serratus_M_contig1112.1063.1|Name=mRNA_F-serratus_M_contig1112.1063.1|organism=Fucus serratus male|type=polypeptide|length=683bp
MRNPEIKGEKYAGAVAFCTLACLQGYWQCPLAEGVGEYFTFVTGNCLFTP
TRVPQGVMNATSYFQGVIMEVLGNLVGRACLIYVGDVQVIGRECGLFLAA
HKLVLFAKEVKWRGKLYSGMAVRHDPECVRGLVEMRRPETVGKLMKFLQA
TSWMRLSLPHMAEVVTPLRALMEHRLNRTSRKKKMASRRAQTDGDWTPER
EEAWDNSRDMLMNAFELSFQRPDECRMLMFADASNLFWGCYLTQVPKKEL
VAGLSFTDMSHEPLAFLSGMFRGSQLCWPTVDKESFETLSTFQRVPYRQG
DSLNIFCDPRNFAYIFCPPILWRDVEQGFVAAPRRVACMHEPVHLLAVKG
EIKDRQDAVARDPVEVVTPLGNMEKDIAKFVRECLPYTDSKADIAMPRPL
GDLVHGTEVGDVLHFDYLSLGENEAINTGGLVDGGYTHVLVLMDDVSRFV
WLKKAVLCSMEVAARFVQKSCASFEVPKAFASDGGTHFTGQVMRMMSSRL
RVVHHFGVANVSWSHGTLERMNRGVVKTIRAVHSERRRPPSEWPLALEAV
QWALNSVYRERMGTTPLHMMTGRPLATVMSVLAGEDGQENFRRDVVKRVR
EQRERVREVSGRGYLQVFEVDDYVLVARVRKPGHVPKLVQTWTGPWRVVP
GGSKHVRVVEYFVPGETKDVHVVRMRPYVDLSL
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mRNA from alignment at F-serratus_M_contig1112:297765..300074-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1112.1063.1 ID=mRNA_F-serratus_M_contig1112.1063.1|Name=mRNA_F-serratus_M_contig1112.1063.1|organism=Fucus serratus male|type=mRNA|length=2310bp|location=Sequence derived from alignment at F-serratus_M_contig1112:297765..300074- (Fucus serratus male)
ATGCGGAACCCTGAGATTAAGGGTGAAAAATATGCTGGCGCCGTGGCTTT TTGTACTTTGGCCTGCCTTCAAGGTTACTGGCAGTGCCCGCTGGCGGAGG GGGTGGGTGAATATTTCACGTTCGTGACTGGGAATTGCCTGTTTACGCCG ACGCGCGTGCCGCAGGGAGTCATGAATGCTACGTCATACTTCCAGGGGGT GATTATGGAGGTCTTGGGAAATCTAGTGGGGCGTGCCTGTTTGATTTATG TGGGTGACGTGCAGGTTATCGGGCGGTCCGTGGAGGAGCTGATAATGATT CTGCGTGCGGTGCTGCTGCGATGTAGGGAGTGTGGTTTGTTTCTTGCGGC GCACAAGCTCGTACTATTTGCCAAAGAGGTCAAATGGCGCGGCAAGCTTT ACTCGGGGATGGCCGTCAGACACGACCCAGAGTGCGTGCGTGGACTGGTG GAGATGCGCCGACCAGAGACGGTGGGCAAACTGATGAAGTTTCTGCAGGC GACGAGTTGGATGCGTTTGTCACTGCCTCACATGGCAGAAGTTGTGACAC CGCTGCGAGCGTTGATGGAACATCGACTGAATAGAACGAGTCGGAAGAAA AAAATGGCGTCGCGGCGGGCTCAGACGGATGGTGATTGGACGCCGGAGCG GGAGGAAGCCTGGGACAACTCCCGCGACATGTTGATGAACGCGTTTGAGT TGAGCTTCCAGCGGCCAGACGAGTGCCGCATGTTGATGTTCGCTGATGCG AGTAATTTGTTTTGGGGGTGTTACTTGACTCAGGTGCCGAAAAAGGAGCT AGTGGCAGGGTTATCTTTCACGGACATGAGTCACGAGCCCCTCGCTTTCC TGAGTGGTATGTTTCGGGGGTCACAGCTGTGTTGGCCAACGGTGGACAAG GAGTCCTTCGAAACTCTTAGCACTTTTCAGCGCGTACCGTACAGGCAGGG TGATAGCTTGAACATTTTTTGCGATCCTCGCAACTTCGCGTACATATTCT GCCCCCCAATCTTGTGGCGTGACGTTGAGCAAGGGTTCGTCGCAGCGCCT CGCCGGGTGGCGTGCATGCATGAGCCTGTTCACCTACGTCATCCAGCACA TCCCCGGGGAGGATAATCATTGGGGTGATCTATTGTCGAGGTGGCGGGTG CTGGATTCTGAAGGCCCTCTGGTGCGCGCGAATGTTATTGCTGTGGTTGC TCCGCCGACTGGTGTCTATCAGTTGCCGTCAAAGGGGAAATCAAGGACAG GCAAGACGCGGTGGCGCGTGATCCAGTTGAGGTGGTGACCCCGTTGGGAA ATATGGAGAAGGATATAGCGAAATTCGTCCGCGAATGTCTACCCTACACC GATTCGAAAGCGGACATTGCTATGCCACGTCCGCTGGGTGATCTAGTGCA TGGAACGGAAGTGGGTGACGTGCTCCACTTCGACTACCTCAGTCTGGGCG AAAACGAGGCCATCAATACGGGTGGTTTGGTCGATGGGGGCTATACGCAT GTGCTAGTGTTGATGGATGACGTGAGCCGGTTCGTCTGGCTGAAAAAAGC GGTGTTATGTTCGATGGAGGTGGCGGCGCGTTTCGTGCAGAAGTCGTGTG CCTCGTTTGAGGTGCCCAAGGCGTTCGCTAGTGATGGTGGGACGCATTTT ACCGGGCAAGTGATGCGCATGATGTCGTCCCGATTGAGGGTGGTTCACCA TTTTGGGGTGGCGAATGTTTCGTGGTCGCATGGGACACTAGAACGGATGA ACCGTGGAGTCGTAAAGACGATTCGTGCGGTCCACAGCGAAAGACGTCGG CCTCCGAGCGAGTGGCCGTTGGCGTTGGAAGCTGTGCAGTGGGCTCTCAA TTCGGTGTACCGGGAACGCATGGGGACGACGCCGTTACATATGATGACGG GACGACCCCTTGCGACCGTAATGTCGGTGCTTGCAGGGGAAGACGGTGAC GCGTGGACTGTGGAGGAGCTAGAAGTGTCGTGCGAGCAAATGCAGTCCTG GGCTGCTGGTTGTCTGCGAGGGCAGGAAAACTTTCGGCGTGATGTGGTGA AGCGCGTTCGTGAGCAGCGTGAGCGTGTACGAGAGGTGAGCGGTCGTGGA TACTTGCAGGTGTTCGAGGTTGATGACTATGTCTTGGTGGCTCGGGTGAG GAAACCGGGTCATGTGCCTAAGCTCGTACAGACCTGGACTGGACCGTGGC GTGTGGTGCCTGGAGGATCAAAGCATGTTCGTGTAGTGGAATATTTTGTC CCGGGGGAAACCAAGGACGTGCACGTGGTGCGAATGCGCCCGTATGTTGA TTTGTCTCTG
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Coding sequence (CDS) from alignment at F-serratus_M_contig1112:297765..300074-

>mRNA_F-serratus_M_contig1112.1063.1 ID=mRNA_F-serratus_M_contig1112.1063.1|Name=mRNA_F-serratus_M_contig1112.1063.1|organism=Fucus serratus male|type=CDS|length=4098bp|location=Sequence derived from alignment at F-serratus_M_contig1112:297765..300074- (Fucus serratus male)
ATGCGGAACCCTGAGATTAAGGGTGAAAAATATGCTGGCGCCGTGGCTTT
TTGTACTTTGGCCTGCCTTCAAGGTTACTGGCAGTGCCCGCTGGCGGAGG
GGGTGGGTGAATATTTCACGTTCGTGACTGGGAATTGCCTGTTTACGCCG
ACGCGCGTGCCGCAGGGAGTCATGAATGCTACGTCATACTTCCAGGGGGT
GATTATGGAGGTCTTGGGAAATCTAGTGGGGCGTGCCTGTTTGATTTATG
TGGGTGACGTGCAGGTTATCGGGCGATGCGGAACCCTGAGATTAAGGGTG
AAAAATATGCTGGCGCCGTGGCTTTTTGTACTTTGGCCTGCCTTCAAGGT
TACTGGCAGTGCCCGCTGGCGGAGGGGGTGGGTGAATATTTCACGTTCGT
GACTGGGAATTGCCTGTTTACGCCGACGCGCGTGCCGCAGGGAGTCATGA
ATGCTACGTCATACTTCCAGGGGGTGATTATGGAGGTCTTGGGAAATCTA
GTGGGGCGTGCCTGTTTGATTTATGTGGGTGACGTGCAGGTTATCGGGCG
GGAGTGTGGTTTGTTTCTTGCGGCGCACAAGCTCGTACTATTTGCCAAAG
AGGTCAAATGGCGCGGCAAGCTTTACTCGGGGATGGCCGTCAGACACGAC
CCAGAGTGCGTGCGTGGACTGGTGGAGATGCGCCGACCAGAGACGGTGGG
CAAACTGATGAAGTTTCTGCAGGCGACGAGTTGGATGCGTTTGTCACTGC
CTCACATGGCAGAAGTTGTGACACCGCTGCGAGCGTTGATGGAACATCGA
CTGAATAGAACGAGTCGGAAGAAAAAAATGGCGTCGCGGCGGGCTCAGAC
GGATGGTGATTGGACGCCGGAGCGGGAGGAAGCCTGGGACAACTCCCGCG
ACATGTTGATGAACGCGTTTGAGTTGAGCTTCCAGCGGCCAGACGAGTGC
CGCATGTTGATGTTCGCTGATGCGAGTAATTTGTTTTGGGGGTGTTACTT
GACTCAGGTGCCGAAAAAGGAGCTAGTGGCAGGGTTATCTTTCACGGACA
TGAGTCACGAGCCCCTCGCTTTCCTGAGTGGTATGTTTCGGGGGTCACAG
CTGTGTTGGCCAACGGTGGACAAGGAGTCCTTCGAAACTCTTAGCACTTT
TCAGCGCGTACCGTACAGGCAGGGTGATAGCTTGAACATTTTTTGCGATC
CTCGCAACTTCGCGTACATATTCTGCCCCCCAATCTTGTGGCGTGACGTT
GAGCAAGGGTTCGTCGCAGCGCCTCGCCGGGTGGCGTGCATGCATGAGCC
TGTTCACCTACGGAGTGTGGTTTGTTTCTTGCGGCGCACAAGCTCGTACT
ATTTGCCAAAGAGGTCAAATGGCGCGGCAAGCTTTACTCGGGGATGGCCG
TCAGACACGACCCAGAGTGCGTGCGTGGACTGGTGGAGATGCGCCGACCA
GAGACGGTGGGCAAACTGATGAAGTTTCTGCAGGCGACGAGTTGGATGCG
TTTGTCACTGCCTCACATGGCAGAAGTTGTGACACCGCTGCGAGCGTTGA
TGGAACATCGACTGAATAGAACGAGTCGGAAGAAAAAAATGGCGTCGCGG
CGGGCTCAGACGGATGGTGATTGGACGCCGGAGCGGGAGGAAGCCTGGGA
CAACTCCCGCGACATGTTGATGAACGCGTTTGAGTTGAGCTTCCAGCGGC
CAGACGAGTGCCGCATGTTGATGTTCGCTGATGCGAGTAATTTGTTTTGG
GGGTGTTACTTGACTCAGGTGCCGAAAAAGGAGCTAGTGGCAGGGTTATC
TTTCACGGACATGAGTCACGAGCCCCTCGCTTTCCTGAGTGGTATGTTTC
GGGGGTCACAGCTGTGTTGGCCAACGGTGGACAAGGAGTCCTTCGAAACT
CTTAGCACTTTTCAGCGCGTACCGTACAGGCAGGGTGATAGCTTGAACAT
TTTTTGCGATCCTCGCAACTTCGCGTACATATTCTGCCCCCCAATCTTGT
GGCGTGACGTTGAGCAAGGGTTCGTCGCAGCGCCTCGCCGGGTGGCGTGC
ATGCATGAGCCTGTTCACCTACTTGCCGTCAAAGGGGAAATCAAGGACAG
GCAAGACGCGGTGGCGCGTGATCCAGTTGAGGTGGTGACCCCGTTGGGAA
ATATGGAGAAGGATATAGCGAAATTCGTCCGCGAATGTCTACCCTACACC
GATTCGAAAGCGGACATTGCTATGCCACGTCCGCTGGGTGATCTAGTGCA
TGGAACGGAAGTGGGTGACGTGCTCCACTTCGACTACCTCAGTCTGGGCG
AAAACGAGGCCATCAATACGGGTGGTTTGGTCGATGGGGGCTATACGCAT
GTGCTAGTGTTGATGGATGACGTGAGCCGGTTCGTCTGGCTGAAAAAAGC
GGTGTTATGTTCGATGGAGGTGGCGGCGCGTTTCGTGCAGAAGTCGTGTG
CCTCGTTTGAGGTGCCCAAGGCGTTCGCTAGTGATGGTGGGACGCATTTT
ACCGGGCAAGTGATGCGCATGATGTCGTCCCGATTGAGGGTGGTTCACCA
TTTTGGGGTGGCGAATGTTTCGTGGTCGCATGGGACACTAGAACGGATGA
ACCGTGGAGTCGTAAAGACGATTCGTGCGGTCCACAGCGAAAGACGTCGG
CCTCCGAGCGAGTGGCCGTTGGCGTTGGAAGCTGTGCAGTGGGCTCTCAA
TTCGGTGTACCGGGAACGCATGGGGACGACGCCGTTACATATGATGACGG
GACGACCCCTTGCGACCGTAATGTCGGTGCTTGCAGGGGAAGACGTTGCC
GTCAAAGGGGAAATCAAGGACAGGCAAGACGCGGTGGCGCGTGATCCAGT
TGAGGTGGTGACCCCGTTGGGAAATATGGAGAAGGATATAGCGAAATTCG
TCCGCGAATGTCTACCCTACACCGATTCGAAAGCGGACATTGCTATGCCA
CGTCCGCTGGGTGATCTAGTGCATGGAACGGAAGTGGGTGACGTGCTCCA
CTTCGACTACCTCAGTCTGGGCGAAAACGAGGCCATCAATACGGGTGGTT
TGGTCGATGGGGGCTATACGCATGTGCTAGTGTTGATGGATGACGTGAGC
CGGTTCGTCTGGCTGAAAAAAGCGGTGTTATGTTCGATGGAGGTGGCGGC
GCGTTTCGTGCAGAAGTCGTGTGCCTCGTTTGAGGTGCCCAAGGCGTTCG
CTAGTGATGGTGGGACGCATTTTACCGGGCAAGTGATGCGCATGATGTCG
TCCCGATTGAGGGTGGTTCACCATTTTGGGGTGGCGAATGTTTCGTGGTC
GCATGGGACACTAGAACGGATGAACCGTGGAGTCGTAAAGACGATTCGTG
CGGTCCACAGCGAAAGACGTCGGCCTCCGAGCGAGTGGCCGTTGGCGTTG
GAAGCTGTGCAGTGGGCTCTCAATTCGGTGTACCGGGAACGCATGGGGAC
GACGCCGTTACATATGATGACGGGACGACCCCTTGCGACCGTAATGTCGG
TGCTTGCAGGGGAAGACGGGCAGGAAAACTTTCGGCGTGATGTGGTGAAG
CGCGTTCGTGAGCAGCGTGAGCGTGTACGAGAGGTGAGCGGTCGTGGATA
CTTGCAGGTGTTCGAGGTTGATGACTATGTCTTGGTGGCTCGGGTGAGGA
AACCGGGTCATGTGCCTAAGCTCGTACAGACCTGGACTGGACCGTGGCGT
GTGGTGCCTGGAGGATCAAAGCATGTTCGTGTAGTGGAATATTTTGTCCC
GGGGGAAACCAAGGACGTGCACGTGGTGCGAATGCGCCCGTATGTTGATT
TGTCTCTGGGCAGGAAAACTTTCGGCGTGATGTGGTGAAGCGCGTTCGTG
AGCAGCGTGAGCGTGTACGAGAGGTGAGCGGTCGTGGATACTTGCAGGTG
TTCGAGGTTGATGACTATGTCTTGGTGGCTCGGGTGAGGAAACCGGGTCA
TGTGCCTAAGCTCGTACAGACCTGGACTGGACCGTGGCGTGTGGTGCCTG
GAGGATCAAAGCATGTTCGTGTAGTGGAATATTTTGTCCCGGGGGAAACC
AAGGACGTGCACGTGGTGCGAATGCGCCCGTATGTTGATTTGTCTCTG
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