prot_F-serratus_M_contig111.1037.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig111.1037.1
Unique Nameprot_F-serratus_M_contig111.1037.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length179
Homology
BLAST of mRNA_F-serratus_M_contig111.1037.1 vs. uniprot
Match: D7G276_ECTSI (Mitochondrial import inner membrane translocase subunit TIM23 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G276_ECTSI)

HSP 1 Score: 262 bits (670), Expect = 7.990e-87
Identity = 130/177 (73.45%), Postives = 148/177 (83.62%), Query Frame = 0
Query:    1 MYGGVAQARFTNHFLAGKEPDYLDYNIKGRSWWERTPYNAGALYLAGIVIGGAAGMQEGIAKAPNRRMRVLTNSIMNHAGKRGSLYGNTLAVLATYYTCFEALLDHYEVDQLAAVQQAGMGDIINPLIAGASTGLLYKSTAGPRLALIASAAGLGVVGVGFAVDKASSTVFGRGFIF 177
            MYGG AQ         GKEP+YLDYNIKGR +WER PYNAGALY+ GI+ GGAAG++EG AKAPNRR RVL NSIMNHAGK+GS YGNT AVLATYYTC E LLDH+EVDQ+  VQQAG+G+IINPL+AGASTGLLYKS+AGPRLAL+AS AGLG VGV +AVDK S++V G+G IF
Sbjct:   39 MYGGAAQ---------GKEPEYLDYNIKGRGFWERMPYNAGALYITGILGGGAAGVREGFAKAPNRRSRVLLNSIMNHAGKKGSFYGNTFAVLATYYTCAETLLDHFEVDQMGPVQQAGLGEIINPLLAGASTGLLYKSSAGPRLALMASVAGLGAVGVAYAVDKTSASVLGQGIIF 206          
BLAST of mRNA_F-serratus_M_contig111.1037.1 vs. uniprot
Match: A0A7S1XNQ0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNQ0_9STRA)

HSP 1 Score: 149 bits (377), Expect = 1.610e-42
Identity = 77/154 (50.00%), Postives = 101/154 (65.58%), Query Frame = 0
Query:   19 EPDYLDYNIKGRSWWERTPYNAGALYLAGIVIGGAAGMQEGIAKAPNRRMRVLTNSIMNHAGKRGSLYGNTLAVLATYYTCFEALLDHYEVDQLAAVQQAGMGDIINPLIAGASTGLLYKSTAGPRLALIASAAGLGVVGVGFAVDKASSTVFG 172
            EP+YLDY IK R   E      G  YLAG++ GG  G+ EG+  +P+ R R+L NSIMN+AGKRGS  GN    +A +Y+ F AL D Y VD      Q G+GD +NP+++GASTGLLYKSTAGPR A++A+  G GV+G  F V++  S + G
Sbjct:   38 EPEYLDYTIKSRGPLENVFSYCGTAYLAGVIGGGGVGLMEGVRSSPSSRFRILFNSIMNNAGKRGSRAGNAFGCVALFYSGFLALYDGYNVDM-----QLGVGDWVNPVLSGASTGLLYKSTAGPRAAILAAVLGGGVIGASFGVEEVVSNMLG 186          
BLAST of mRNA_F-serratus_M_contig111.1037.1 vs. uniprot
Match: A0A835Z638_9STRA (Mitochondrial import inner membrane translocase subunit TIM23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z638_9STRA)

HSP 1 Score: 123 bits (308), Expect = 5.870e-32
Identity = 69/145 (47.59%), Postives = 93/145 (64.14%), Query Frame = 0
Query:   19 EPDYLDYNIKGRSWWERTPYNAGALYLAGIVIGGAAGMQEGIAKAPNRRMRVLTNSIMNHAGKRGSLYGNTLAVLATYYTCFEALLDHYEVDQLAAVQQAGMGDIINPLIAGASTGLLY---KSTAGPRLALIASAAGLGVVGVG 160
            EPDYLDYNIKGR  +E+T YN G  YLAGI+ GG  G+ EG   AP+ R R+  N+I+N AGKRGS  GNTLAVLA +YT FE + D  EVD      + G  + ++P++AG++   L+   K+     LA +A  AG+G + +G
Sbjct:   54 EPDYLDYNIKGRDTFEKTTYNTGMCYLAGIIGGGGYGVLEGARTAPSSRARIRVNAILNAAGKRGSRAGNTLAVLAMFYTGFEFMFDSLEVDA-----KVGDAEWLHPVLAGSAAMTLFYTGKNVRTMALAGVAGGAGMGALYLG 193          
BLAST of mRNA_F-serratus_M_contig111.1037.1 vs. uniprot
Match: A0A7S0AZQ3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AZQ3_9STRA)

HSP 1 Score: 122 bits (307), Expect = 6.520e-32
Identity = 64/147 (43.54%), Postives = 90/147 (61.22%), Query Frame = 0
Query:   18 KEPDYLDYNIKGRSWWERTPYNAGALYLAGIVIGGAAGMQEGIAKAPNRRMRVLTNSIMNHAGKRGSLYGNTLAVLATYYTCFEALLDHYEVDQLAAVQQAGMGDI-INPLIAGASTGLLYKSTAGPRLALIASAAGLGVVGVGFAV 163
            ++PDYLDY+ KGR        N G  YL GIV GG  G++EG+   P+ R +V  NS++NH G+ GS  GN L V +  Y+ FE L DHY++DQ     +  +G++  +P  A   TG+ YK+TAGPR+A +A   GLG VG  +A+
Sbjct:   54 QQPDYLDYDTKGRGVVVTMFANTGVSYLLGIVAGGVYGLREGLLHTPSSRFKVKLNSVLNHCGRHGSWAGNVLGVASIMYSLFEGLADHYDLDQYT---RPVVGEVPASPAFAALMTGVTYKATAGPRVAALAGTIGLGAVGATYAL 197          
BLAST of mRNA_F-serratus_M_contig111.1037.1 vs. uniprot
Match: A0A7S2QVE9_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QVE9_9STRA)

HSP 1 Score: 122 bits (306), Expect = 6.830e-32
Identity = 58/145 (40.00%), Postives = 91/145 (62.76%), Query Frame = 0
Query:   19 EPDYLDYNIKGRSWWERTPYNAGALYLAGIVIGGAAGMQEGIAKAPNRRMRVLTNSIMNHAGKRGSLYGNTLAVLATYYTCFEALLDHYEVDQLAAVQQAGMGDIINPLIAGASTGLLYKSTAGPRLALIASAAGLGVVGVGFAV 163
            EP+YLDY+IKGR WW+RT  + G  YL G  +GG  G++ G++  PN R +V  N+++NH+G+ GS  GN +  +A  Y+ FE   +  +V++       G   ++ P+I    +G++YKSTAGPR+A ++   G+G VG  +AV
Sbjct:   29 EPEYLDYDIKGRGWWDRTVSSTGWGYLIGTGVGGIYGVKTGMSSVPNSRFKVKVNALLNHSGRYGSRVGNAVGCVALLYSLFEGASEKLDVEKYT-YSIIGHSPLVTPMIGSIMSGIVYKSTAGPRVAALSGTIGMGTVGGYYAV 172          
BLAST of mRNA_F-serratus_M_contig111.1037.1 vs. uniprot
Match: A0A4D9D4E0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4E0_9STRA)

HSP 1 Score: 120 bits (302), Expect = 3.120e-31
Identity = 66/136 (48.53%), Postives = 87/136 (63.97%), Query Frame = 0
Query:   18 KEPDYLDYNIKGRSWWERTPYNAGALYLAGIVIGGAAGMQEGIAKAPNRRMRVLTNSIMNHAGKRGSLYGNTLAVLATYYTCFEALLDHYEVDQLAAVQQAGMGDIINPLIAGASTGLLYKSTAGPRLALIASAAG 153
            +EPDYLDY+IKGR   ER    +G+ YL GI+ GG  G + G   AP+ R  +  NS+MN AGK GS +GN   V A  Y+  E+LLDH+E D++    QA     +NP+++GA +GLLYKSTA PR A +AS  G
Sbjct:   43 EEPDYLDYDIKGRGTVERMFLYSGSSYLTGILTGGILGGRTGWKTAPSPRFWLRLNSVMNGAGKLGSKWGNNAGVFALMYSLSESLLDHFETDKVLGGHQA-----VNPVLSGAISGLLYKSTAAPRTAALASVLG 173          
BLAST of mRNA_F-serratus_M_contig111.1037.1 vs. uniprot
Match: A0A6S8GC44_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8GC44_9STRA)

HSP 1 Score: 120 bits (300), Expect = 8.810e-31
Identity = 60/146 (41.10%), Postives = 88/146 (60.27%), Query Frame = 0
Query:   12 NHFLAGKEPDYLDYNIKGRSWWERTPYNAGALYLAGIVIGGAAGMQEGIAKAPNRRMRVLTNSIMNHAGKRGSLYGNTLAVLATYYTCFEALLDHYEVDQLAAVQQAGMGDIINPLIAGASTGLLYKSTAGPRLALIASAAGLGVV 157
            N  + G  P+YL Y+ KGR + E+T YN G +YL GIV GG  G  EG+  +P+ + ++  N+++N  G+RGS  GN L  LA  Y+ F+AL   +E+D          G  +NPL+A  +TGL+YKST GP+   +A+  G G+V
Sbjct:   44 NPMIQGNGPEYLQYDTKGRGYTEKTFYNCGTMYLLGIVGGGTYGFFEGLRSSPSNKFKIRLNTVLNKCGRRGSRAGNALGALALMYSLFDALAGTFEIDHYLG------GYDVNPLLAATATGLVYKSTHGPKTMALAAVIGGGLV 183          
BLAST of mRNA_F-serratus_M_contig111.1037.1 vs. uniprot
Match: W7TXH2_9STRA (Mitochondrial import inner membrane translocase subunit tim23 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXH2_9STRA)

HSP 1 Score: 121 bits (303), Expect = 1.170e-30
Identity = 66/136 (48.53%), Postives = 87/136 (63.97%), Query Frame = 0
Query:   18 KEPDYLDYNIKGRSWWERTPYNAGALYLAGIVIGGAAGMQEGIAKAPNRRMRVLTNSIMNHAGKRGSLYGNTLAVLATYYTCFEALLDHYEVDQLAAVQQAGMGDIINPLIAGASTGLLYKSTAGPRLALIASAAG 153
            +EPDYLDY+IKGR   ER    +G+ YL GI+ GG  G + G   AP+ R  +  NS+MN AGK GS +GN   V A  Y+  E+LLDH+E D++    QA     +NP+++GA +GLLYKSTA PR A +AS  G
Sbjct:  109 EEPDYLDYDIKGRGTVERMFLYSGSSYLTGILTGGILGGRRGWKTAPSPRFWLRLNSVMNGAGKLGSKWGNNAGVFALMYSLSESLLDHFETDKVLGGHQA-----VNPVLSGAISGLLYKSTAAPRTAALASVLG 239          
BLAST of mRNA_F-serratus_M_contig111.1037.1 vs. uniprot
Match: A0A7R9W7X5_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W7X5_9STRA)

HSP 1 Score: 118 bits (295), Expect = 4.820e-30
Identity = 69/159 (43.40%), Postives = 91/159 (57.23%), Query Frame = 0
Query:   20 PDYLDYNIKGRSWWERTPYNAGALYLAGIVIGGAAGMQEGIAKAPNRRMRVLTNSIMNHAGKRGSLYGNTLAVLATYYTCFEALLDHYEVDQLAAVQQAGMGDIINPLIAGASTGLLYKSTAGPRLALIASAAGLGVVGVGFAVDKASSTVFG-RGFIF 177
            PDYLDY+ KGR        NAG  YL GIV GG  G++EG+A  P+ R RV  NS++NH G+ GS  GN L VL+  Y+ +E   D +E+++     Q        P  A   TG  Y S AGPR+A +A A GLG VGV + V +A    +G RG++F
Sbjct:   51 PDYLDYDQKGRGVMVTMFANAGMSYLLGIVGGGLYGLREGLAHTPSTRFRVRLNSVLNHCGRHGSRAGNVLGVLSVMYSLYEWQADMWELEEYTGPVQPAA-----PAFAAMMTGATYYSRAGPRVAGLAGAIGLGAVGVTYGVYRALGIPYGHRGYLF 204          
BLAST of mRNA_F-serratus_M_contig111.1037.1 vs. uniprot
Match: A0A7S3QG58_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QG58_9STRA)

HSP 1 Score: 117 bits (294), Expect = 5.370e-30
Identity = 65/159 (40.88%), Postives = 89/159 (55.97%), Query Frame = 0
Query:   20 PDYLDYNIKGRSWWERTPYNAGALYLAGIVIGGAAGMQEGIAKAPNRRMRVLTNSIMNHAGKRGSLYGNTLAVLATYYTCFEALLDHYEVDQLAAVQQAGMGDIINPLIAGASTGLLYKSTAGPRLALIASAAGLGVVGVGFAVDKASSTVFG-RGFIF 177
            PDYL+Y+ KGR        N G  YL GIV GG  G++EG+   P+ R RV  NS++NH  + GS  GN + VL+  Y+ FE   DH+E+DQ     Q      + P +A  +TG  YK  AGPR+A +A A GLG VGV +         +G +G++F
Sbjct:   42 PDYLEYDTKGRGITTTMFANTGLAYLLGIVGGGFYGLREGLQNTPSNRFRVKLNSVLNHCSRHGSRVGNMMGVLSIGYSLFEGAADHFEIDQYTGPVQP-----VGPALAAFATGATYKIQAGPRVAGLAGAIGLGCVGVTYTAYSVLGIPYGQKGWLF 195          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig111.1037.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G276_ECTSI7.990e-8773.45Mitochondrial import inner membrane translocase su... [more]
A0A7S1XNQ0_9STRA1.610e-4250.00Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A835Z638_9STRA5.870e-3247.59Mitochondrial import inner membrane translocase su... [more]
A0A7S0AZQ3_9STRA6.520e-3243.54Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
A0A7S2QVE9_9STRA6.830e-3240.00Hypothetical protein n=1 Tax=Triparma pacifica Tax... [more]
A0A4D9D4E0_9STRA3.120e-3148.53Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A6S8GC44_9STRA8.810e-3141.10Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
W7TXH2_9STRA1.170e-3048.53Mitochondrial import inner membrane translocase su... [more]
A0A7R9W7X5_9STRA4.820e-3043.40Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S3QG58_9STRA5.370e-3040.88Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF02466Tim17coord: 38..154
e-value: 1.2E-15
score: 57.8
NoneNo IPR availablePANTHERPTHR15371TIM23coord: 27..159
NoneNo IPR availablePANTHERPTHR15371:SF0MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-RELATEDcoord: 27..159
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 145..163
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 164..178
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..61
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..40
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 62..144
NoneNo IPR availableTMHMMTMhelixcoord: 141..163
NoneNo IPR availableTMHMMTMhelixcoord: 82..104
NoneNo IPR availableTMHMMTMhelixcoord: 39..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig111contigF-serratus_M_contig111:312651..315803 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig111.1037.1mRNA_F-serratus_M_contig111.1037.1Fucus serratus malemRNAF-serratus_M_contig111 312525..315896 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig111.1037.1 ID=prot_F-serratus_M_contig111.1037.1|Name=mRNA_F-serratus_M_contig111.1037.1|organism=Fucus serratus male|type=polypeptide|length=179bp
MYGGVAQARFTNHFLAGKEPDYLDYNIKGRSWWERTPYNAGALYLAGIVI
GGAAGMQEGIAKAPNRRMRVLTNSIMNHAGKRGSLYGNTLAVLATYYTCF
EALLDHYEVDQLAAVQQAGMGDIINPLIAGASTGLLYKSTAGPRLALIAS
AAGLGVVGVGFAVDKASSTVFGRGFIFQ*
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