mRNA_F-serratus_M_contig111.1037.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig111.1037.1
Unique NamemRNA_F-serratus_M_contig111.1037.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig111.1037.1 vs. uniprot
Match: D7G276_ECTSI (Mitochondrial import inner membrane translocase subunit TIM23 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G276_ECTSI)

HSP 1 Score: 308 bits (790), Expect = 7.470e-104
Identity = 153/205 (74.63%), Postives = 174/205 (84.88%), Query Frame = 1 
Query:   10 GSQDPYSDASAKYGPLKLPQLEPVDLTKMYGGVAQARFTNHFLAGKEPDYLDYNIKGRSWWERTPYNAGALYLAGIVIGGAAGMQEGIAKAPNRRMRVLTNSIMNHAGKRGSLYGNTLAVLATYYTCFEALLDHYEVDQLAAVQQAGMGDIINPLIAGASTGLLYKSTAGPRLALIASAAGLGVVGVGFAVDKASSTVFGRGFIF 624
            G QDPYSDASAKYGPLKLP+L+ VDL+KMYGG AQ         GKEP+YLDYNIKGR +WER PYNAGALY+ GI+ GGAAG++EG AKAPNRR RVL NSIMNHAGK+GS YGNT AVLATYYTC E LLDH+EVDQ+  VQQAG+G+IINPL+AGASTGLLYKS+AGPRLAL+AS AGLG VGV +AVDK S++V G+G IF
Sbjct:   11 GVQDPYSDASAKYGPLKLPELQNVDLSKMYGGAAQ---------GKEPEYLDYNIKGRGFWERMPYNAGALYITGILGGGAAGVREGFAKAPNRRSRVLLNSIMNHAGKKGSFYGNTFAVLATYYTCAETLLDHFEVDQMGPVQQAGLGEIINPLLAGASTGLLYKSSAGPRLALMASVAGLGAVGVAYAVDKTSASVLGQGIIF 206
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BLAST of mRNA_F-serratus_M_contig111.1037.1 vs. uniprot
Match: A0A7S1XNQ0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNQ0_9STRA)

HSP 1 Score: 150 bits (378), Expect = 1.290e-41
Identity = 77/154 (50.00%), Postives = 101/154 (65.58%), Query Frame = 1 
Query:  148 EPDYLDYNIKGRSWWERTPYNAGALYLAGIVIGGAAGMQEGIAKAPNRRMRVLTNSIMNHAGKRGSLYGNTLAVLATYYTCFEALLDHYEVDQLAAVQQAGMGDIINPLIAGASTGLLYKSTAGPRLALIASAAGLGVVGVGFAVDKASSTVFG 609
            EP+YLDY IK R   E      G  YLAG++ GG  G+ EG+  +P+ R R+L NSIMN+AGKRGS  GN    +A +Y+ F AL D Y VD      Q G+GD +NP+++GASTGLLYKSTAGPR A++A+  G GV+G  F V++  S + G
Sbjct:   38 EPEYLDYTIKSRGPLENVFSYCGTAYLAGVIGGGGVGLMEGVRSSPSSRFRILFNSIMNNAGKRGSRAGNAFGCVALFYSGFLALYDGYNVDM-----QLGVGDWVNPVLSGASTGLLYKSTAGPRAAILAAVLGGGVIGASFGVEEVVSNMLG 186
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BLAST of mRNA_F-serratus_M_contig111.1037.1 vs. uniprot
Match: A0A835Z638_9STRA (Mitochondrial import inner membrane translocase subunit TIM23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z638_9STRA)

HSP 1 Score: 140 bits (353), Expect = 1.080e-37
Identity = 86/196 (43.88%), Postives = 116/196 (59.18%), Query Frame = 1 
Query:   10 GSQDPYSDASAKYGPLKLPQLEP--VDLTK---MYGGVAQARFTNHFLAGKEPDYLDYNIKGRSWWERTPYNAGALYLAGIVIGGAAGMQEGIAKAPNRRMRVLTNSIMNHAGKRGSLYGNTLAVLATYYTCFEALLDHYEVDQLAAVQQAGMGDIINPLIAGASTGLLY---KSTAGPRLALIASAAGLGVVGVG 573
            G  DPY+D  AK+G L+LP+L    +DL     MYG      +        EPDYLDYNIKGR  +E+T YN G  YLAGI+ GG  G+ EG   AP+ R R+  N+I+N AGKRGS  GNTLAVLA +YT FE + D  EVD      + G  + ++P++AG++   L+   K+     LA +A  AG+G + +G
Sbjct:   11 GDNDPYTDPGAKFGRLELPKLNTSSIDLGSLAGMYGVQGGGAY--------EPDYLDYNIKGRDTFEKTTYNTGMCYLAGIIGGGGYGVLEGARTAPSSRARIRVNAILNAAGKRGSRAGNTLAVLAMFYTGFEFMFDSLEVDA-----KVGDAEWLHPVLAGSAAMTLFYTGKNVRTMALAGVAGGAGMGALYLG 193
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BLAST of mRNA_F-serratus_M_contig111.1037.1 vs. uniprot
Match: A0A7S2QVE9_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QVE9_9STRA)

HSP 1 Score: 132 bits (332), Expect = 8.470e-35
Identity = 67/185 (36.22%), Postives = 106/185 (57.30%), Query Frame = 1 
Query:   52 PLKLPQLEPVDLTKMYGGVAQARFTNHFLAGKEPDYLDYNIKGRSWWERTPYNAGALYLAGIVIGGAAGMQEGIAKAPNRRMRVLTNSIMNHAGKRGSLYGNTLAVLATYYTCFEALLDHYEVDQLAAVQQAGMGDIINPLIAGASTGLLYKSTAGPRLALIASAAGLGVVGVGFAVDKASSTVF 606
            P  LP L+ +DL ++ GG+             EP+YLDY+IKGR WW+RT  + G  YL G  +GG  G++ G++  PN R +V  N+++NH+G+ GS  GN +  +A  Y+ FE   +  +V++       G   ++ P+I    +G++YKSTAGPR+A ++   G+G VG  +AV +     F
Sbjct:    8 PPTLPSLDGIDLRRVAGGITS-----------EPEYLDYDIKGRGWWDRTVSSTGWGYLIGTGVGGIYGVKTGMSSVPNSRFKVKVNALLNHSGRYGSRVGNAVGCVALLYSLFEGASEKLDVEKYT-YSIIGHSPLVTPMIGSIMSGIVYKSTAGPRVAALSGTIGMGTVGGYYAVCQVMGWKF 180
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BLAST of mRNA_F-serratus_M_contig111.1037.1 vs. uniprot
Match: A0A7S0AZQ3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AZQ3_9STRA)

HSP 1 Score: 124 bits (310), Expect = 2.190e-31
Identity = 73/192 (38.02%), Postives = 104/192 (54.17%), Query Frame = 1 
Query:   10 GSQDPYSDASAKYGPLKLPQLEPVDLTKMYGGVAQARFTNHFLAGKEPDYLDYNIKGRSWWERTPYNAGALYLAGIVIGGAAGMQEGIAKAPNRRMRVLTNSIMNHAGKRGSLYGNTLAVLATYYTCFEALLDHYEVDQLAAVQQAGMGDI-INPLIAGASTGLLYKSTAGPRLALIASAAGLGVVGVGFAV 582
            G + PY D  A   PL       + LT +   +         +  ++PDYLDY+ KGR        N G  YL GIV GG  G++EG+   P+ R +V  NS++NH G+ GS  GN L V +  Y+ FE L DHY++DQ     +  +G++  +P  A   TG+ YK+TAGPR+A +A   GLG VG  +A+
Sbjct:   18 GVERPYDDTDAG-SPLPSFDASSIKLTTVAPALG--------VPTQQPDYLDYDTKGRGVVVTMFANTGVSYLLGIVAGGVYGLREGLLHTPSSRFKVKLNSVLNHCGRHGSWAGNVLGVASIMYSLFEGLADHYDLDQYT---RPVVGEVPASPAFAALMTGVTYKATAGPRVAALAGTIGLGAVGATYAL 197
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BLAST of mRNA_F-serratus_M_contig111.1037.1 vs. uniprot
Match: A0A4D9D4E0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4E0_9STRA)

HSP 1 Score: 120 bits (302), Expect = 2.890e-30
Identity = 66/136 (48.53%), Postives = 87/136 (63.97%), Query Frame = 1 
Query:  145 KEPDYLDYNIKGRSWWERTPYNAGALYLAGIVIGGAAGMQEGIAKAPNRRMRVLTNSIMNHAGKRGSLYGNTLAVLATYYTCFEALLDHYEVDQLAAVQQAGMGDIINPLIAGASTGLLYKSTAGPRLALIASAAG 552
            +EPDYLDY+IKGR   ER    +G+ YL GI+ GG  G + G   AP+ R  +  NS+MN AGK GS +GN   V A  Y+  E+LLDH+E D++    QA     +NP+++GA +GLLYKSTA PR A +AS  G
Sbjct:   43 EEPDYLDYDIKGRGTVERMFLYSGSSYLTGILTGGILGGRTGWKTAPSPRFWLRLNSVMNGAGKLGSKWGNNAGVFALMYSLSESLLDHFETDKVLGGHQA-----VNPVLSGAISGLLYKSTAAPRTAALASVLG 173
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BLAST of mRNA_F-serratus_M_contig111.1037.1 vs. uniprot
Match: A0A6S8GC44_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8GC44_9STRA)

HSP 1 Score: 120 bits (300), Expect = 8.090e-30
Identity = 60/146 (41.10%), Postives = 88/146 (60.27%), Query Frame = 1 
Query:  127 NHFLAGKEPDYLDYNIKGRSWWERTPYNAGALYLAGIVIGGAAGMQEGIAKAPNRRMRVLTNSIMNHAGKRGSLYGNTLAVLATYYTCFEALLDHYEVDQLAAVQQAGMGDIINPLIAGASTGLLYKSTAGPRLALIASAAGLGVV 564
            N  + G  P+YL Y+ KGR + E+T YN G +YL GIV GG  G  EG+  +P+ + ++  N+++N  G+RGS  GN L  LA  Y+ F+AL   +E+D          G  +NPL+A  +TGL+YKST GP+   +A+  G G+V
Sbjct:   44 NPMIQGNGPEYLQYDTKGRGYTEKTFYNCGTMYLLGIVGGGTYGFFEGLRSSPSNKFKIRLNTVLNKCGRRGSRAGNALGALALMYSLFDALAGTFEIDHYLG------GYDVNPLLAATATGLVYKSTHGPKTMALAAVIGGGLV 183
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BLAST of mRNA_F-serratus_M_contig111.1037.1 vs. uniprot
Match: W7TXH2_9STRA (Mitochondrial import inner membrane translocase subunit tim23 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXH2_9STRA)

HSP 1 Score: 121 bits (303), Expect = 1.090e-29
Identity = 66/136 (48.53%), Postives = 87/136 (63.97%), Query Frame = 1 
Query:  145 KEPDYLDYNIKGRSWWERTPYNAGALYLAGIVIGGAAGMQEGIAKAPNRRMRVLTNSIMNHAGKRGSLYGNTLAVLATYYTCFEALLDHYEVDQLAAVQQAGMGDIINPLIAGASTGLLYKSTAGPRLALIASAAG 552
            +EPDYLDY+IKGR   ER    +G+ YL GI+ GG  G + G   AP+ R  +  NS+MN AGK GS +GN   V A  Y+  E+LLDH+E D++    QA     +NP+++GA +GLLYKSTA PR A +AS  G
Sbjct:  109 EEPDYLDYDIKGRGTVERMFLYSGSSYLTGILTGGILGGRRGWKTAPSPRFWLRLNSVMNGAGKLGSKWGNNAGVFALMYSLSESLLDHFETDKVLGGHQA-----VNPVLSGAISGLLYKSTAAPRTAALASVLG 239
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BLAST of mRNA_F-serratus_M_contig111.1037.1 vs. uniprot
Match: A0A7R9W7X5_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W7X5_9STRA)

HSP 1 Score: 118 bits (296), Expect = 3.090e-29
Identity = 69/159 (43.40%), Postives = 91/159 (57.23%), Query Frame = 1 
Query:  151 PDYLDYNIKGRSWWERTPYNAGALYLAGIVIGGAAGMQEGIAKAPNRRMRVLTNSIMNHAGKRGSLYGNTLAVLATYYTCFEALLDHYEVDQLAAVQQAGMGDIINPLIAGASTGLLYKSTAGPRLALIASAAGLGVVGVGFAVDKASSTVFG-RGFIF 624
            PDYLDY+ KGR        NAG  YL GIV GG  G++EG+A  P+ R RV  NS++NH G+ GS  GN L VL+  Y+ +E   D +E+++     Q        P  A   TG  Y S AGPR+A +A A GLG VGV + V +A    +G RG++F
Sbjct:   51 PDYLDYDQKGRGVMVTMFANAGMSYLLGIVGGGLYGLREGLAHTPSTRFRVRLNSVLNHCGRHGSRAGNVLGVLSVMYSLYEWQADMWELEEYTGPVQPAA-----PAFAAMMTGATYYSRAGPRVAGLAGAIGLGAVGVTYGVYRALGIPYGHRGYLF 204
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BLAST of mRNA_F-serratus_M_contig111.1037.1 vs. uniprot
Match: A0A7S3QG58_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QG58_9STRA)

HSP 1 Score: 118 bits (295), Expect = 3.430e-29
Identity = 65/159 (40.88%), Postives = 89/159 (55.97%), Query Frame = 1 
Query:  151 PDYLDYNIKGRSWWERTPYNAGALYLAGIVIGGAAGMQEGIAKAPNRRMRVLTNSIMNHAGKRGSLYGNTLAVLATYYTCFEALLDHYEVDQLAAVQQAGMGDIINPLIAGASTGLLYKSTAGPRLALIASAAGLGVVGVGFAVDKASSTVFG-RGFIF 624
            PDYL+Y+ KGR        N G  YL GIV GG  G++EG+   P+ R RV  NS++NH  + GS  GN + VL+  Y+ FE   DH+E+DQ     Q      + P +A  +TG  YK  AGPR+A +A A GLG VGV +         +G +G++F
Sbjct:   42 PDYLEYDTKGRGITTTMFANTGLAYLLGIVGGGFYGLREGLQNTPSNRFRVKLNSVLNHCSRHGSRVGNMMGVLSIGYSLFEGAADHFEIDQYTGPVQP-----VGPALAAFATGATYKIQAGPRVAGLAGAIGLGCVGVTYTAYSVLGIPYGQKGWLF 195
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig111.1037.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G276_ECTSI7.470e-10474.63Mitochondrial import inner membrane translocase su... [more]
A0A7S1XNQ0_9STRA1.290e-4150.00Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A835Z638_9STRA1.080e-3743.88Mitochondrial import inner membrane translocase su... [more]
A0A7S2QVE9_9STRA8.470e-3536.22Hypothetical protein n=1 Tax=Triparma pacifica Tax... [more]
A0A7S0AZQ3_9STRA2.190e-3138.02Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
A0A4D9D4E0_9STRA2.890e-3048.53Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A6S8GC44_9STRA8.090e-3041.10Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
W7TXH2_9STRA1.090e-2948.53Mitochondrial import inner membrane translocase su... [more]
A0A7R9W7X5_9STRA3.090e-2943.40Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S3QG58_9STRA3.430e-2940.88Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig111contigF-serratus_M_contig111:312525..315896 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score262.7
Seed ortholog evalue1.3e-67
Seed eggNOG ortholog2880.D7G276
Preferred nameTIMM23
KEGG rclassRC00034
KEGG koko:K00430,ko:K17794
KEGG TC3.A.8.1
KEGG ReactionR00602,R02596,R03919,R04007,R07443
KEGG Pathwayko00940,ko01100,ko01110,ko04212,map00940,map01100,map01110,map04212
Hectar predicted targeting categoryother localisation
GOsGO:0001101,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005744,GO:0005758,GO:0006605,GO:0006626,GO:0006810,GO:0006839,GO:0006886,GO:0006996,GO:0007005,GO:0007006,GO:0007007,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009719,GO:0009725,GO:0009893,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010604,GO:0010628,GO:0010954,GO:0014070,GO:0015031,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0017038,GO:0019222,GO:0019866,GO:0019899,GO:0022804,GO:0022857,GO:0022884,GO:0030150,GO:0030162,GO:0030943,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031304,GO:0031305,GO:0031323,GO:0031325,GO:0031966,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0032268,GO:0032270,GO:0032592,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042221,GO:0042277,GO:0042719,GO:0042886,GO:0042887,GO:0043200,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044743,GO:0045039,GO:0045184,GO:0045862,GO:0046907,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051641,GO:0051649,GO:0055085,GO:0060255,GO:0061024,GO:0065002,GO:0065007,GO:0070013,GO:0070585,GO:0070613,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072655,GO:0072657,GO:0080090,GO:0090150,GO:0090151,GO:0097066,GO:0098573,GO:0098796,GO:0098798,GO:0098800,GO:1901698,GO:1901700,GO:1903317,GO:1903319,GO:1904680,GO:1905242,GO:1990351,GO:1990542
EggNOG free text desc.protein import into mitochondrial matrix
EggNOG OGsCOG5596@1,KOG3324@2759
Ec32 ortholog descriptionMitochondrial import inner membrane translocase subunit TIM23 homolog
Ec32 orthologEc-16_002190.1
EC1.11.1.7
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000,ko03029
Exons5
Model size756
Cds size537
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928993.4316866-UTR-F-serratus_M_contig111:312524..3126501622928993.4316866-UTR-F-serratus_M_contig111:312524..312650Fucus serratus maleUTRF-serratus_M_contig111 312525..312650 -
1690962660.4307098-UTR-F-serratus_M_contig111:312524..3126501690962660.4307098-UTR-F-serratus_M_contig111:312524..312650Fucus serratus maleUTRF-serratus_M_contig111 312525..312650 -
1622928993.5271437-UTR-F-serratus_M_contig111:315803..3158961622928993.5271437-UTR-F-serratus_M_contig111:315803..315896Fucus serratus maleUTRF-serratus_M_contig111 315804..315896 -
1690962660.4984019-UTR-F-serratus_M_contig111:315803..3158961690962660.4984019-UTR-F-serratus_M_contig111:315803..315896Fucus serratus maleUTRF-serratus_M_contig111 315804..315896 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928993.4482784-CDS-F-serratus_M_contig111:312650..3127661622928993.4482784-CDS-F-serratus_M_contig111:312650..312766Fucus serratus maleCDSF-serratus_M_contig111 312651..312766 -
1690962660.4457693-CDS-F-serratus_M_contig111:312650..3127661690962660.4457693-CDS-F-serratus_M_contig111:312650..312766Fucus serratus maleCDSF-serratus_M_contig111 312651..312766 -
1622928993.466884-CDS-F-serratus_M_contig111:313372..3135131622928993.466884-CDS-F-serratus_M_contig111:313372..313513Fucus serratus maleCDSF-serratus_M_contig111 313373..313513 -
1690962660.4573216-CDS-F-serratus_M_contig111:313372..3135131690962660.4573216-CDS-F-serratus_M_contig111:313372..313513Fucus serratus maleCDSF-serratus_M_contig111 313373..313513 -
1622928993.4799063-CDS-F-serratus_M_contig111:314222..3143631622928993.4799063-CDS-F-serratus_M_contig111:314222..314363Fucus serratus maleCDSF-serratus_M_contig111 314223..314363 -
1690962660.4669921-CDS-F-serratus_M_contig111:314222..3143631690962660.4669921-CDS-F-serratus_M_contig111:314222..314363Fucus serratus maleCDSF-serratus_M_contig111 314223..314363 -
1622928993.4983552-CDS-F-serratus_M_contig111:314956..3150471622928993.4983552-CDS-F-serratus_M_contig111:314956..315047Fucus serratus maleCDSF-serratus_M_contig111 314957..315047 -
1690962660.4773996-CDS-F-serratus_M_contig111:314956..3150471690962660.4773996-CDS-F-serratus_M_contig111:314956..315047Fucus serratus maleCDSF-serratus_M_contig111 314957..315047 -
1622928993.5157132-CDS-F-serratus_M_contig111:315755..3158031622928993.5157132-CDS-F-serratus_M_contig111:315755..315803Fucus serratus maleCDSF-serratus_M_contig111 315756..315803 -
1690962660.4895568-CDS-F-serratus_M_contig111:315755..3158031690962660.4895568-CDS-F-serratus_M_contig111:315755..315803Fucus serratus maleCDSF-serratus_M_contig111 315756..315803 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig111.1037.1prot_F-serratus_M_contig111.1037.1Fucus serratus malepolypeptideF-serratus_M_contig111 312651..315803 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig111.1037.1

>prot_F-serratus_M_contig111.1037.1 ID=prot_F-serratus_M_contig111.1037.1|Name=mRNA_F-serratus_M_contig111.1037.1|organism=Fucus serratus male|type=polypeptide|length=179bp
MYGGVAQARFTNHFLAGKEPDYLDYNIKGRSWWERTPYNAGALYLAGIVI
GGAAGMQEGIAKAPNRRMRVLTNSIMNHAGKRGSLYGNTLAVLATYYTCF
EALLDHYEVDQLAAVQQAGMGDIINPLIAGASTGLLYKSTAGPRLALIAS
AAGLGVVGVGFAVDKASSTVFGRGFIFQ*
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mRNA from alignment at F-serratus_M_contig111:312525..315896-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig111.1037.1 ID=mRNA_F-serratus_M_contig111.1037.1|Name=mRNA_F-serratus_M_contig111.1037.1|organism=Fucus serratus male|type=mRNA|length=3372bp|location=Sequence derived from alignment at F-serratus_M_contig111:312525..315896- (Fucus serratus male)
GATAACGACGGATCTCAGGACCCCTACAGCGATGCCAGCGCCAAGTACGG
CCCGTTGAAGCTACCGCAGCTGGAGCCCGTCGACCTCACCAAGATGTACG
GCGGGGTGGCGCAGGCGCGTTTTACAAATCATTTTTTAGCGGTACACTAA
ATGGTTGCCTTCCACCGCCCTACAGTCAACATCTCCTGCGTGTAACCCCC
ACAGGCACGTAACCCTCCCTTGTCGAAGACGCCTACTCGGTATCCTCCGG
CCCTACAGTTAACATTTCCTGCGTGTACCCCCCACAGGCACTCAACCCTC
CCTTGTCGAAGACACCTACTCCGTTGCCTCCGTTGCCTCACCCCCGTTAC
ACTCTTGATCCCGCTGTGATAGACGGCACAGACACGAATCCAGGAAGAGG
TATTTCATTCCTGCAGCACGATGACCAACGATGACCAATCTCATACTCTA
TAACAGTCAAAACGTGAAAGTTGTAGCTCAATGCAACAACCACTGTTGTA
CTTTTTCTTCTCATATTCGGGGTTGCCGACAAGGTATTAGTAGCATCAAT
TCTACTACGGTACAATTTTGGTTACGTTGCTACTCGTACCTTTCTGGGGA
AGAGCGAGCAGTAGCAACACAGAACACCATCGTACACGTGGCGAATTGAC
CCATCTCGCGGTCCAGGGCCCACTGATCTCTTGGGCGCGGGGAGGGGGGG
GGGGGGGGGGATCTACCGCGTGAACGGAGCTTTGGGTCATTACGTGTCCC
TCTATCTCTCTCGTGGCGTGGGTTAGATCGACAGGGGTTATGTGTATGAT
TATCTCATTGACCTGCGCCCCCCCTCCCCCGCACACATTCCTTACGCAGG
GGAAGGAGCCGGATTACTTGGACTATAACATCAAGGGGAGGAGTTGGTGG
GAGCGCACGCCCTACAACGCCGGCGCGTTGTACCTCGCCGGTGAGAATTT
CGATTCCGTCTTCTTTCTCGCGGCGACCGGGGCATCTATAGACATCCATA
GATGCGCGCAGAACGCATAATGGTGTGTTTCCCTTGAAATATTATTAGTT
AGCCGCATCCTTCAGTGTATAACGGTTTCTCCAAAACGTTTCGATCCTAA
GGAAAGCATAGGCCCACGTCGATGGCTCGCGCGCCGTGACTTTTGCTCTG
CTGGTTGGGTTTACCCACGTTGCCGAGAAGGAAGTAACATTTTTCTCCTC
GGGGGGAGGGTCTTCAACCGCCCTCCTAGCTGCAGTAACCCTTCCGCCAG
AATCGCCGTAGCTTCTTAAGCGTTGAAGTTAATCACCCCCCGGGTTGAAG
ATGAAGGGAGTGTTTTCCTGTGTTGGATTTCTGTGCCATGCACGACTTTT
TCAAGTTGCCGTTATGCACAGACTCGAGCGTGTAATCTACCAGCGCTCGA
ACCTGCGCACGGGTACTCCTAAAAAACAAGGTTATAAACTCAGATTTGTA
TGCCCTCTCGATCTCCGCCGTTTTTCGCACCGCCATGGGATGGGACATTA
CGGAACGGAACGGCGGGCATGTTTTCTCCTCAGGGATCGTGATAGGGGGA
GCGGCTGGTATGCAGGAAGGTATCGCCAAGGCGCCCAACCGGCGAATGAG
GGTCCTGACGAACAGCATCATGAATCACGCGGGCAAGCGTGGCTCGTTGT
ACGGCAACACCCTCGCTGTCCTCGGTGAGAATTTTTTGTTTTACCTTCCT
CTAGAGGGAGAAAGACGAAGGGGCACGTAGGCGTGTTATCCAAACGGCTC
CGTCGGGAAGGCGTTATGATGTATGGAGCCGCTCCGGGTTGAAGCACAAG
TCTACTGTATAAGCTTGTATAACCGCAGCGCTTGGCCGCTCCCCTCCGAC
GTTCTTTATTTATAGAATAGCGGCCCTATTGGGCGGGACTCGCCCCACCT
TCCTTGAAAAACTGGTTCAGCGGCCGTTACAACGTCACCTGTTACCTCCC
CATATATATCAATGCTATAAGAGGTTGCACGTTACTTGAGCGCCCGGAGC
GATATGACGTGGTCTTTGTTTTGCAGTAAAACAACTGATTTGGGTGGGGG
GGATGCTGAACTCTAGGATGGTGCGCGCGGCCGTCGTTCGCAGTCCAGGT
TCAAAGTATGAGAGCGATGATCATAGCGAGAAAGTGATTTAGAAGATCAC
GCGCTCCTTTGTATGCCCCTGGCTCGGCGGGCCCAGTACGCCGGATCAAA
GCTCAGCCACCCGTTTTGTGTTTGTAGACGGCGGGGGAATCCCCACAATT
GTGGAGGGGCGTTGCTATAGTTTTCCTCGGCCGTCTCAGCCGCCGGCGAC
GTTTTGGGCCCTTCTGTATCTCTTTTGAACGCCCCGCTCTACAGCATACC
CACATACCCACACCCTTGCCTCGATCCCTCCAGCCACGTACTACACCTGC
TTCGAGGCCTTGCTTGACCACTATGAGGTGGATCAGCTTGCCGCGGTGCA
ACAGGCGGGAATGGGAGACATCATTAACCCCTTGATAGCGGGCGCATCCA
CGGGTCTCCTGTACAAGAGCACAGGTGAGAGGCGCAACGTCGGGCTGCTG
ATGTTTCGAAGCGCAGCGCACGCCAATTCCACCGCTGGGTTTATAGCTGT
GGAGGGGGAAAGGGAGAGATTGGAAGAAAAGAGGAGGACGGCGTGTCCTG
ATTTTATTTTATTTTACGCGTTGCTTTTATAGAAGACTGATTGCTTCTGT
AAATAACACCGAGCAAGGAAGTTAAGAAGGAGCTCGTAGCAGCGAAGAGC
TCCCCCGCGAGATCGCCGCAATTGTCCTTTTCTTTAAGGAAACGTCCAAC
ACCGTACAGTCAAGCCCCCCGCCCTCTATGCCAGCCCAGCTCTTCCCCAT
GAACCCTCGTCAAATTGTCTGGATATGTATTGTATGGAGGCGTTTGTTGT
ATTGTAACGAAAACTCATTGGATTTTGAGCGCCAGCGACGTGTTCTGTAA
GTCTAGAGTTGATGGCACGCGAGAAACGAGCCGAAAACAGTACAAGCGGT
CAGGTGCTTCCCTTCCCTCCCCCCCCCTTTATCACTACTTCTCTCGCCCC
CGAACACGTGTACGCCTCATTTACCTCCCATTTTTTCCGGCGGCGTACCT
GTACCATAATTTTCCATCCTCTACTTGCAGCGGGGCCAAGATTGGCTCTA
ATCGCCTCAGCCGCGGGACTCGGAGTGGTGGGGGTGGGTTTCGCTGTAGA
CAAGGCGTCGTCGACGGTGTTTGGCCGCGGATTTATCTTCCAGTGAAAAA
TGCTGAATGCTTGGCGACGTCTATGTGGTTCATATCAACCGTCGCGACAA
CGGCGTTGGTGGCTGTATACGCATCTGGGGTGGTAAAATTCTCTAGATGG
AAGTGCCGGCAGGCGAGAGAAA
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Coding sequence (CDS) from alignment at F-serratus_M_contig111:312525..315896-

>mRNA_F-serratus_M_contig111.1037.1 ID=mRNA_F-serratus_M_contig111.1037.1|Name=mRNA_F-serratus_M_contig111.1037.1|organism=Fucus serratus male|type=CDS|length=1074bp|location=Sequence derived from alignment at F-serratus_M_contig111:312525..315896- (Fucus serratus male)
ATGTACGGCGGGGTGGCGCAGGCGCGTTTTACAAATCATTTTTTAGCGAT
GTACGGCGGGGTGGCGCAGGCGCGTTTTACAAATCATTTTTTAGCGGGGA
AGGAGCCGGATTACTTGGACTATAACATCAAGGGGAGGAGTTGGTGGGAG
CGCACGCCCTACAACGCCGGCGCGTTGTACCTCGCCGGGGAAGGAGCCGG
ATTACTTGGACTATAACATCAAGGGGAGGAGTTGGTGGGAGCGCACGCCC
TACAACGCCGGCGCGTTGTACCTCGCCGGGATCGTGATAGGGGGAGCGGC
TGGTATGCAGGAAGGTATCGCCAAGGCGCCCAACCGGCGAATGAGGGTCC
TGACGAACAGCATCATGAATCACGCGGGCAAGCGTGGCTCGTTGTACGGC
AACACCCTCGCTGTCCTCGGGATCGTGATAGGGGGAGCGGCTGGTATGCA
GGAAGGTATCGCCAAGGCGCCCAACCGGCGAATGAGGGTCCTGACGAACA
GCATCATGAATCACGCGGGCAAGCGTGGCTCGTTGTACGGCAACACCCTC
GCTGTCCTCGCCACGTACTACACCTGCTTCGAGGCCTTGCTTGACCACTA
TGAGGTGGATCAGCTTGCCGCGGTGCAACAGGCGGGAATGGGAGACATCA
TTAACCCCTTGATAGCGGGCGCATCCACGGGTCTCCTGTACAAGAGCACA
GCCACGTACTACACCTGCTTCGAGGCCTTGCTTGACCACTATGAGGTGGA
TCAGCTTGCCGCGGTGCAACAGGCGGGAATGGGAGACATCATTAACCCCT
TGATAGCGGGCGCATCCACGGGTCTCCTGTACAAGAGCACAGCGGGGCCA
AGATTGGCTCTAATCGCCTCAGCCGCGGGACTCGGAGTGGTGGGGGTGGG
TTTCGCTGTAGACAAGGCGTCGTCGACGGTGTTTGGCCGCGGATTTATCT
TCCAGTGACGGGGCCAAGATTGGCTCTAATCGCCTCAGCCGCGGGACTCG
GAGTGGTGGGGGTGGGTTTCGCTGTAGACAAGGCGTCGTCGACGGTGTTT
GGCCGCGGATTTATCTTCCAGTGA
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