prot_F-serratus_M_contig111.1034.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig111.1034.1
Unique Nameprot_F-serratus_M_contig111.1034.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length335
Homology
BLAST of mRNA_F-serratus_M_contig111.1034.1 vs. uniprot
Match: D7G280_ECTSI (TAFII55_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G280_ECTSI)

HSP 1 Score: 307 bits (786), Expect = 9.610e-100
Identity = 232/334 (69.46%), Postives = 255/334 (76.35%), Query Frame = 0
Query:    3 STTYRQLVLRLPDGLKQTMRERVGNDIGLVGVEFAPVKKGSRRFTFTMDENIYPARLVDLPCILETQKTLDRTTFFKSGDVGQMLIVYKDENAYKRDESNASGVGPQELFPDGLTPPTKNVVRRRFLKARPDRRKFKRTEARFSFCIHVIRVESQVLKIQQDGSLPEGSDSTKRLVGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXRPGGAXXXXXSRSLRPTXXXXXXXXXXXXXXXXXXXXXXXXXGVGETVTFEHEEIVEFEPWMADPEMAAVGRLEGVTIEARITGPTQKLEADNTGQSSLSHPAP-PPLPRLFDSELLYEHPEMLLAAV 335
            STTYRQLVLRLPDGLK+ MRERV  D G+ GV+F P KKGSRRFTFTMD   YPARLVD+PC+LETQKTLD+ TFFKSGDVGQMLIVYKDENAYK+D+ NASGVGPQ L+PDGLTPPTKN+VRRRF+KARPDR KF R E        VIRVESQVLK+QQD  +PEG D +++     XXXXXXXXXXXXXXXXXXXXXXXXXXX                 XXXXXXXXXXXXXXXXXXXXXXX  G G+ VTFEHEEIV FEPWMADP+ AA+GRLEG+T+E  ITG T+K EA                 PRLF SELLYEHPE+LLA V
Sbjct:    2 STTYRQLVLRLPDGLKEAMRERVAADTGMEGVDFTPEKKGSRRFTFTMDGKKYPARLVDMPCVLETQKTLDKRTFFKSGDVGQMLIVYKDENAYKKDDGNASGVGPQRLYPDGLTPPTKNIVRRRFVKARPDRGKFDRAE--------VIRVESQVLKMQQD--VPEGPDRSRKAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------XXXXXXXXXXXXXXXXXXXXXXXXEVG-GDGVTFEHEEIVPFEPWMADPKFAALGRLEGITLE--ITGTTEKPEAGAAXXXXXXXXXEGSTAPRLFGSELLYEHPEILLAVV 307          
BLAST of mRNA_F-serratus_M_contig111.1034.1 vs. uniprot
Match: A0A835YLK6_9STRA (TAFII55 protein conserved region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLK6_9STRA)

HSP 1 Score: 137 bits (345), Expect = 2.770e-34
Identity = 76/159 (47.80%), Postives = 106/159 (66.67%), Query Frame = 0
Query:    2 SSTTYRQLVLRLPDGLKQTMRERV--GNDIGLVGVEFAPVKKGSRRFTFTMDENIYPARLVDLPCILETQKTLDRTTFFKSGDVGQMLIVYKDENAYKRDESNASGVGPQELFPDGLTPPTKNVVRRRFLKARPDRRKFKRTEARFSFCIHVIRVESQV 158
            S+  YRQL+LR+PD LK  +RERV  G    +   +F    +   ++ FT+D   YPARLV+LPC LET KT D T ++KS D+GQMLIVY+DE+A+  D  +AS +GP + + DG+TPPT+N+VRR+F+KARP   KF + +        V+ VESQ+
Sbjct:    5 SAGLYRQLILRVPDKLKGRVRERVQAGQSDNM---DFVQDGENPLKYVFTIDGERYPARLVNLPCNLETLKTTDNTMYYKSADIGQMLIVYEDEDAFNADAEDAS-IGPAQYYADGITPPTRNIVRRKFVKARPVLGKFPKAQ--------VMTVESQL 151          
BLAST of mRNA_F-serratus_M_contig111.1034.1 vs. uniprot
Match: A0A7S2RHU4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RHU4_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 2.210e-18
Identity = 67/176 (38.07%), Postives = 98/176 (55.68%), Query Frame = 0
Query:    7 RQLVLR-LPDGLKQTMRERVG----NDI--------GLVGVEFAPVKKGSRRFTFTMDENIYPARLVDLPCILETQKTLDRTTFFKSGDVGQMLIVYKDENAYKRDESNASGVGPQELFPDGLTPPTKNVVRRRFLKARPDRRKFKRTEARFSFCIHVIRVESQVLKIQQDGSLPE 169
            RQ++LR LP+ L + +RE++     +D+         L  ++ +P    S++  F + + IYP  LV+LPC +E+ KT DR T FKS D+GQMLIV+++E   ++ E    GV  Q  F  GLTPPT  V RRRF + + + R F R E        V  VE ++LK+    S PE
Sbjct:   14 RQVILRILPESLLEAIREKLVEGSLSDVQFFFEDPPALSTLQVSP----SQKMVFQLGDMIYPGLLVNLPCPVESHKTFDRITTFKSADIGQMLIVFENEGEREKAEKEC-GV-EQRFFHSGLTPPTSYVTRRRFAQTKSELRSFTRKE--------VSEVEDELLKLMS--STPE 173          
BLAST of mRNA_F-serratus_M_contig111.1034.1 vs. uniprot
Match: A0A397VEC4_9GLOM (TAFII55 protein conserved region-domain-containing protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397VEC4_9GLOM)

HSP 1 Score: 92.0 bits (227), Expect = 5.180e-17
Identity = 67/173 (38.73%), Postives = 88/173 (50.87%), Query Frame = 0
Query:    8 QLVLRL--PDGLKQTMRERVGNDIGLVGVEFAP-----VKKGSRRFTFTMDENIYPARLVDLPCILETQKTLDRTTFFKSGDVGQMLIVYK----DENAYKRDESNASGVGPQELFPDGLTPPTKNVVRRRFLKARPDRRKFKRTEARFSFCIHVIRVESQVLKIQQDGSLPE 169
            Q +LRL  P+ +KQ  RE+V         +FAP     + K SRR  FT +   Y ARLVDLPCI+E QKT +   F+K  D+ QMLIV       E  +   E+ AS    Q  +PDGLTPP KNV  RRF K   +++              +  +E +V K+  D SL E
Sbjct:   91 QFILRLMVPEDVKQRFREKVRRQ------KFAPEDVEIMFKDSRRAIFTFENQKYSARLVDLPCIIEAQKTFNNKQFYKVADICQMLIVESPIDTQEEVHMFTENMASSSIDQFEWPDGLTPPLKNVRNRRFRKRISNKK--------------IEDIEKEVEKLLHDDSLAE 243          
BLAST of mRNA_F-serratus_M_contig111.1034.1 vs. uniprot
Match: A0A397SH43_9GLOM (TAFII55 protein conserved region-domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397SH43_9GLOM)

HSP 1 Score: 88.6 bits (218), Expect = 6.850e-17
Identity = 59/134 (44.03%), Postives = 78/134 (58.21%), Query Frame = 0
Query:    8 QLVLRL--PDGLKQTMRERVGN-----DIGLVGVEFAPVKKGSRRFTFTMDENIYPARLVDLPCILETQKTLDRTTFFKSGDVGQMLIV----YKDENAYKRDESNASGVGPQELFPDGLTPPTKNVVRRRFLK 130
            Q +LRL  P+ +KQ  RE+V N     DIG+V        K  RR  FT +   Y ARLVDLPCI+E QKT ++  ++K  D+ QMLIV     +DE  +  +   +S V   E +PDGLTPP KN+ +RRF K
Sbjct:   78 QFILRLMVPEDVKQKFREKVKNGKFTDDIGIVF-------KDPRRAIFTFENQKYRARLVDLPCIIEAQKTFNKIQYYKVADICQMLIVESQIQEDEQIFT-ENPKSSNVDEFE-WPDGLTPPLKNIRKRRFRK 202          
BLAST of mRNA_F-serratus_M_contig111.1034.1 vs. uniprot
Match: A0A8J2T034_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T034_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 2.400e-16
Identity = 55/116 (47.41%), Postives = 74/116 (63.79%), Query Frame = 0
Query:   33 GVEFAP-----VKKG---SRRFTFTMDENIYPARLVDLPCILETQKTLDRTTFFKSGDVGQMLIVYKDENAYKRDESNAS---GVGPQELFPDGLTPPTKNVVRRRFLKARPDRRK 137
            GVEF P     VK+    S  F   +D+   PARLV+LP I+ET KT DR T+ K GDVGQ+L+V+KDE++  +D++  +   G     + PDGLTPP ++V+RRRF KAR   RK
Sbjct:   78 GVEFTPEGDTSVKQDDFHSLDFRCKIDDLDLPARLVNLPTIVETHKTWDRETYVKCGDVGQILLVFKDESSRTQDKARQAAHAGSAWSLVHPDGLTPPLQDVIRRRFSKARKRSRK 193          
BLAST of mRNA_F-serratus_M_contig111.1034.1 vs. uniprot
Match: A0A397IKD7_9GLOM (TAFII55_N domain-containing protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397IKD7_9GLOM)

HSP 1 Score: 87.8 bits (216), Expect = 1.710e-15
Identity = 66/170 (38.82%), Postives = 89/170 (52.35%), Query Frame = 0
Query:    8 QLVLRL--PDGLKQTMRERVGND--IGLVGVEFAPVKKGSRRFTFTMDENIYPARLVDLPCILETQKTLDRTTFFKSGDVGQMLIVYKD-ENAYKRD---ESNASGVGPQELFPDGLTPPTKNVVRRRFLKARPDRRKFKRTEARFSFCIHVIRVESQVLKIQQDGSLPE 169
            Q +LRL  P+ +KQ  RE+V     I  VG+ F    K SRR  FT +   Y ARLVDLPCI+E QKT +    +K  D+ QMLIV    EN Y+     E+ +S +   E +PDGLT P KNV + RF K   +++              +  +E +V K+  D SL E
Sbjct:   92 QFILRLMIPEDIKQKFREKVKKRKLINEVGISF----KDSRRAIFTFENQKYSARLVDLPCIIEAQKTFNNKQLYKVADICQMLIVESPIENQYEEQLFAENTSSNIDQFE-WPDGLTLPMKNVRKTRFRKRISNKK--------------IEDIEKEVEKLLHDDSLAE 242          
BLAST of mRNA_F-serratus_M_contig111.1034.1 vs. uniprot
Match: U9UHV9_RHIID (TAFII55_N domain-containing protein (Fragment) n=1 Tax=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) TaxID=747089 RepID=U9UHV9_RHIID)

HSP 1 Score: 84.0 bits (206), Expect = 2.160e-15
Identity = 56/131 (42.75%), Postives = 77/131 (58.78%), Query Frame = 0
Query:    8 QLVLRL--PDGLKQTMRERV--GNDIGLVGVEFAPVKKGSRRFTFTMDENIYPARLVDLPCILETQKTLDRTTFFKSGDVGQMLIV---YKDENAYKRDESNASGVGPQELFPDGLT-PPTKNVVRRRFLK 130
            Q +LRL  P+ +KQ  RE+V  G     +G+ F    K  RR  FT +   Y A+LVDLPCI+E QKT ++  ++K  D+ QML+V    +D+     + S +S V   E +PDGLT PP KNV +RRF K
Sbjct:   74 QFILRLMVPEDVKQKFREKVKTGKFTDDIGIIF----KDPRRAIFTFENQKYRAKLVDLPCIIEAQKTFNKIQYYKVADICQMLVVESQIQDDEQLFTENSKSSNVDEFE-WPDGLTTPPLKNVRKRRFRK 199          
BLAST of mRNA_F-serratus_M_contig111.1034.1 vs. uniprot
Match: A0A286UHB2_9AGAM (Transcription initiation factor tfiid 55 kDa subunit n=1 Tax=Pyrrhoderma noxium TaxID=2282107 RepID=A0A286UHB2_9AGAM)

HSP 1 Score: 86.7 bits (213), Expect = 3.360e-15
Identity = 65/173 (37.57%), Postives = 93/173 (53.76%), Query Frame = 0
Query:    8 QLVLRLPDG-----LKQTMRER-VGNDIGLVGVEFAPVKKGSRRFTFTMDENIYPARLVDLPCILETQKTLDRTTFFKSGDVGQMLIVYKDENAYKRDESNASGVGPQE-LFPDGLTPPTKNVVRRRFLKARPDRRKFKRTEARFSFCIHVIRVESQVLKIQQDGSLPEGSDS 173
            Q +LR+P G     L++ +  R +GND+     +F    K SRR  F M  N+Y ++LVDLPCI+E+QKTLD    FK  D+ QML+V +D+   +   SN  G    E ++P G+TPP  +V +RRF K R ++R  +  E      +      SQV     D   P+ SDS
Sbjct:  105 QFILRVPPGEDCEKLRKAVAARDIGNDVWF---KF----KDSRRAVFHMGNNLYSSKLVDLPCIIESQKTLDNKQMFKVADICQMLVV-EDKIESEEAVSNQRGFNIDEFIWPHGITPPLHHVRKRRFRK-RVNKRTIETVEQEVERLLEEDAKASQVQYTVLDNVNPDLSDS 268          
BLAST of mRNA_F-serratus_M_contig111.1034.1 vs. uniprot
Match: A0A7S3JUW2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUW2_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 3.870e-15
Identity = 59/146 (40.41%), Postives = 82/146 (56.16%), Query Frame = 0
Query:    1 MSSTTYRQLVLRL--PDGLKQTMRERV-----GNDIGLVGVEF-APVKKGSRRFTFTMDENIYPARLVDLPCILETQKTLDR-TTFFKSGDVGQMLIVYKDENAYKRDESNASGVGPQELFPDGLTPPTKNVVRRRFLKARPDRRK 137
            MS+T   QL+L    PD L + + E V     G ++ +V  E  A   + SRR    +  + YP RLV+LP ++ET KT D     +K GDVGQ++IVY++E A + DE        Q ++ DG++PP KN V RRF KAR  R K
Sbjct:    1 MSTTVQTQLLLHAESPDVLAK-LSELVDAAEGGGELEIVAEEREANENESSRRMKLVIMGHTYPTRLVNLPTLVETHKTFDNGKNVYKCGDVGQVVIVYQNEAARRADEGRTIHKAWQHVYQDGISPPLKNCVERRFAKARRRRAK 145          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig111.1034.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G280_ECTSI9.610e-10069.46TAFII55_N domain-containing protein n=2 Tax=Ectoca... [more]
A0A835YLK6_9STRA2.770e-3447.80TAFII55 protein conserved region-domain-containing... [more]
A0A7S2RHU4_9STRA2.210e-1838.07Hypothetical protein (Fragment) n=2 Tax=Rhizochrom... [more]
A0A397VEC4_9GLOM5.180e-1738.73TAFII55 protein conserved region-domain-containing... [more]
A0A397SH43_9GLOM6.850e-1744.03TAFII55 protein conserved region-domain-containing... [more]
A0A8J2T034_9STRA2.400e-1647.41Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A397IKD7_9GLOM1.710e-1538.82TAFII55_N domain-containing protein n=1 Tax=Divers... [more]
U9UHV9_RHIID2.160e-1542.75TAFII55_N domain-containing protein (Fragment) n=1... [more]
A0A286UHB2_9AGAM3.360e-1537.57Transcription initiation factor tfiid 55 kDa subun... [more]
A0A7S3JUW2_9STRA3.870e-1540.41Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006751TAFII55 protein, conserved regionSMARTSM01370TAFII55_N_2coord: 8..170
e-value: 3.7E-29
score: 112.9
IPR006751TAFII55 protein, conserved regionPFAMPF04658TAFII55_Ncoord: 8..132
e-value: 1.8E-27
score: 96.0
IPR037817Transcription initiation factor TFIID subunit 7PANTHERPTHR12228TRANSCRIPTION INITIATION FACTOR TFIID 55 KD SUBUNIT-RELATEDcoord: 7..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig111contigF-serratus_M_contig111:148852..151647 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig111.1034.1mRNA_F-serratus_M_contig111.1034.1Fucus serratus malemRNAF-serratus_M_contig111 148852..151647 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig111.1034.1 ID=prot_F-serratus_M_contig111.1034.1|Name=mRNA_F-serratus_M_contig111.1034.1|organism=Fucus serratus male|type=polypeptide|length=335bp
MSSTTYRQLVLRLPDGLKQTMRERVGNDIGLVGVEFAPVKKGSRRFTFTM
DENIYPARLVDLPCILETQKTLDRTTFFKSGDVGQMLIVYKDENAYKRDE
SNASGVGPQELFPDGLTPPTKNVVRRRFLKARPDRRKFKRTEARFSFCIH
VIRVESQVLKIQQDGSLPEGSDSTKRLVGNGGSSSSSAAGGGAAGGAASG
GGGGGSSSRPGGAGGGGSSRSLRPTGGDSSRGRSGGGGVGNGGSNGGAGG
GVGETVTFEHEEIVEFEPWMADPEMAAVGRLEGVTIEARITGPTQKLEAD
NTGQSSLSHPAPPPLPRLFDSELLYEHPEMLLAAV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006751TAFII55_prot_cons_reg
IPR037817TAF7