mRNA_F-serratus_M_contig111.1034.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig111.1034.1
Unique NamemRNA_F-serratus_M_contig111.1034.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig111.1034.1 vs. uniprot
Match: D7G280_ECTSI (TAFII55_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G280_ECTSI)

HSP 1 Score: 307 bits (786), Expect = 9.610e-100
Identity = 232/334 (69.46%), Postives = 255/334 (76.35%), Query Frame = 1 
Query:    7 STTYRQLVLRLPDGLKQTMRERVGNDIGLVGVEFAPVKKGSRRFTFTMDENIYPARLVDLPCILETQKTLDRTTFFKSGDVGQMLIVYKDENAYKRDESNASGVGPQELFPDGLTPPTKNVVRRRFLKARPDRRKFKRTEARFSFCIHVIRVESQVLKIQQDGSLPEGSDSTKRLVGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXRPGGAXXXXXSRSLRPTXXXXXXXXXXXXXXXXXXXXXXXXXGVGETVTFEHEEIVEFEPWMADPEMAAVGRLEGVTIEARITGPTQKLEADNTGQSSLSHPAP-PPLPRLFDSELLYEHPEMLLAAV 1005
            STTYRQLVLRLPDGLK+ MRERV  D G+ GV+F P KKGSRRFTFTMD   YPARLVD+PC+LETQKTLD+ TFFKSGDVGQMLIVYKDENAYK+D+ NASGVGPQ L+PDGLTPPTKN+VRRRF+KARPDR KF R E        VIRVESQVLK+QQD  +PEG D +++     XXXXXXXXXXXXXXXXXXXXXXXXXXX                 XXXXXXXXXXXXXXXXXXXXXXX  G G+ VTFEHEEIV FEPWMADP+ AA+GRLEG+T+E  ITG T+K EA                 PRLF SELLYEHPE+LLA V
Sbjct:    2 STTYRQLVLRLPDGLKEAMRERVAADTGMEGVDFTPEKKGSRRFTFTMDGKKYPARLVDMPCVLETQKTLDKRTFFKSGDVGQMLIVYKDENAYKKDDGNASGVGPQRLYPDGLTPPTKNIVRRRFVKARPDRGKFDRAE--------VIRVESQVLKMQQD--VPEGPDRSRKAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------XXXXXXXXXXXXXXXXXXXXXXXXEVG-GDGVTFEHEEIVPFEPWMADPKFAALGRLEGITLE--ITGTTEKPEAGAAXXXXXXXXXEGSTAPRLFGSELLYEHPEILLAVV 307
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BLAST of mRNA_F-serratus_M_contig111.1034.1 vs. uniprot
Match: A0A835YLK6_9STRA (TAFII55 protein conserved region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLK6_9STRA)

HSP 1 Score: 137 bits (345), Expect = 2.770e-34
Identity = 76/159 (47.80%), Postives = 106/159 (66.67%), Query Frame = 1 
Query:    4 SSTTYRQLVLRLPDGLKQTMRERV--GNDIGLVGVEFAPVKKGSRRFTFTMDENIYPARLVDLPCILETQKTLDRTTFFKSGDVGQMLIVYKDENAYKRDESNASGVGPQELFPDGLTPPTKNVVRRRFLKARPDRRKFKRTEARFSFCIHVIRVESQV 474
            S+  YRQL+LR+PD LK  +RERV  G    +   +F    +   ++ FT+D   YPARLV+LPC LET KT D T ++KS D+GQMLIVY+DE+A+  D  +AS +GP + + DG+TPPT+N+VRR+F+KARP   KF + +        V+ VESQ+
Sbjct:    5 SAGLYRQLILRVPDKLKGRVRERVQAGQSDNM---DFVQDGENPLKYVFTIDGERYPARLVNLPCNLETLKTTDNTMYYKSADIGQMLIVYEDEDAFNADAEDAS-IGPAQYYADGITPPTRNIVRRKFVKARPVLGKFPKAQ--------VMTVESQL 151
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BLAST of mRNA_F-serratus_M_contig111.1034.1 vs. uniprot
Match: A0A7S2RHU4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RHU4_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 2.210e-18
Identity = 67/176 (38.07%), Postives = 98/176 (55.68%), Query Frame = 1 
Query:   19 RQLVLR-LPDGLKQTMRERVG----NDI--------GLVGVEFAPVKKGSRRFTFTMDENIYPARLVDLPCILETQKTLDRTTFFKSGDVGQMLIVYKDENAYKRDESNASGVGPQELFPDGLTPPTKNVVRRRFLKARPDRRKFKRTEARFSFCIHVIRVESQVLKIQQDGSLPE 507
            RQ++LR LP+ L + +RE++     +D+         L  ++ +P    S++  F + + IYP  LV+LPC +E+ KT DR T FKS D+GQMLIV+++E   ++ E    GV  Q  F  GLTPPT  V RRRF + + + R F R E        V  VE ++LK+    S PE
Sbjct:   14 RQVILRILPESLLEAIREKLVEGSLSDVQFFFEDPPALSTLQVSP----SQKMVFQLGDMIYPGLLVNLPCPVESHKTFDRITTFKSADIGQMLIVFENEGEREKAEKEC-GV-EQRFFHSGLTPPTSYVTRRRFAQTKSELRSFTRKE--------VSEVEDELLKLMS--STPE 173
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BLAST of mRNA_F-serratus_M_contig111.1034.1 vs. uniprot
Match: A0A397VEC4_9GLOM (TAFII55 protein conserved region-domain-containing protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397VEC4_9GLOM)

HSP 1 Score: 92.0 bits (227), Expect = 5.180e-17
Identity = 67/173 (38.73%), Postives = 88/173 (50.87%), Query Frame = 1 
Query:   22 QLVLRL--PDGLKQTMRERVGNDIGLVGVEFAP-----VKKGSRRFTFTMDENIYPARLVDLPCILETQKTLDRTTFFKSGDVGQMLIVYK----DENAYKRDESNASGVGPQELFPDGLTPPTKNVVRRRFLKARPDRRKFKRTEARFSFCIHVIRVESQVLKIQQDGSLPE 507
            Q +LRL  P+ +KQ  RE+V         +FAP     + K SRR  FT +   Y ARLVDLPCI+E QKT +   F+K  D+ QMLIV       E  +   E+ AS    Q  +PDGLTPP KNV  RRF K   +++              +  +E +V K+  D SL E
Sbjct:   91 QFILRLMVPEDVKQRFREKVRRQ------KFAPEDVEIMFKDSRRAIFTFENQKYSARLVDLPCIIEAQKTFNNKQFYKVADICQMLIVESPIDTQEEVHMFTENMASSSIDQFEWPDGLTPPLKNVRNRRFRKRISNKK--------------IEDIEKEVEKLLHDDSLAE 243
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BLAST of mRNA_F-serratus_M_contig111.1034.1 vs. uniprot
Match: A0A397SH43_9GLOM (TAFII55 protein conserved region-domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397SH43_9GLOM)

HSP 1 Score: 88.6 bits (218), Expect = 6.850e-17
Identity = 59/134 (44.03%), Postives = 78/134 (58.21%), Query Frame = 1 
Query:   22 QLVLRL--PDGLKQTMRERVGN-----DIGLVGVEFAPVKKGSRRFTFTMDENIYPARLVDLPCILETQKTLDRTTFFKSGDVGQMLIV----YKDENAYKRDESNASGVGPQELFPDGLTPPTKNVVRRRFLK 390
            Q +LRL  P+ +KQ  RE+V N     DIG+V        K  RR  FT +   Y ARLVDLPCI+E QKT ++  ++K  D+ QMLIV     +DE  +  +   +S V   E +PDGLTPP KN+ +RRF K
Sbjct:   78 QFILRLMVPEDVKQKFREKVKNGKFTDDIGIVF-------KDPRRAIFTFENQKYRARLVDLPCIIEAQKTFNKIQYYKVADICQMLIVESQIQEDEQIFT-ENPKSSNVDEFE-WPDGLTPPLKNIRKRRFRK 202
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BLAST of mRNA_F-serratus_M_contig111.1034.1 vs. uniprot
Match: A0A8J2T034_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T034_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 2.400e-16
Identity = 55/116 (47.41%), Postives = 74/116 (63.79%), Query Frame = 1 
Query:   97 GVEFAP-----VKKG---SRRFTFTMDENIYPARLVDLPCILETQKTLDRTTFFKSGDVGQMLIVYKDENAYKRDESNAS---GVGPQELFPDGLTPPTKNVVRRRFLKARPDRRK 411
            GVEF P     VK+    S  F   +D+   PARLV+LP I+ET KT DR T+ K GDVGQ+L+V+KDE++  +D++  +   G     + PDGLTPP ++V+RRRF KAR   RK
Sbjct:   78 GVEFTPEGDTSVKQDDFHSLDFRCKIDDLDLPARLVNLPTIVETHKTWDRETYVKCGDVGQILLVFKDESSRTQDKARQAAHAGSAWSLVHPDGLTPPLQDVIRRRFSKARKRSRK 193
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BLAST of mRNA_F-serratus_M_contig111.1034.1 vs. uniprot
Match: A0A397IKD7_9GLOM (TAFII55_N domain-containing protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397IKD7_9GLOM)

HSP 1 Score: 87.8 bits (216), Expect = 1.710e-15
Identity = 66/170 (38.82%), Postives = 89/170 (52.35%), Query Frame = 1 
Query:   22 QLVLRL--PDGLKQTMRERVGND--IGLVGVEFAPVKKGSRRFTFTMDENIYPARLVDLPCILETQKTLDRTTFFKSGDVGQMLIVYKD-ENAYKRD---ESNASGVGPQELFPDGLTPPTKNVVRRRFLKARPDRRKFKRTEARFSFCIHVIRVESQVLKIQQDGSLPE 507
            Q +LRL  P+ +KQ  RE+V     I  VG+ F    K SRR  FT +   Y ARLVDLPCI+E QKT +    +K  D+ QMLIV    EN Y+     E+ +S +   E +PDGLT P KNV + RF K   +++              +  +E +V K+  D SL E
Sbjct:   92 QFILRLMIPEDIKQKFREKVKKRKLINEVGISF----KDSRRAIFTFENQKYSARLVDLPCIIEAQKTFNNKQLYKVADICQMLIVESPIENQYEEQLFAENTSSNIDQFE-WPDGLTLPMKNVRKTRFRKRISNKK--------------IEDIEKEVEKLLHDDSLAE 242
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BLAST of mRNA_F-serratus_M_contig111.1034.1 vs. uniprot
Match: U9UHV9_RHIID (TAFII55_N domain-containing protein (Fragment) n=1 Tax=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) TaxID=747089 RepID=U9UHV9_RHIID)

HSP 1 Score: 84.0 bits (206), Expect = 2.160e-15
Identity = 56/131 (42.75%), Postives = 77/131 (58.78%), Query Frame = 1 
Query:   22 QLVLRL--PDGLKQTMRERV--GNDIGLVGVEFAPVKKGSRRFTFTMDENIYPARLVDLPCILETQKTLDRTTFFKSGDVGQMLIV---YKDENAYKRDESNASGVGPQELFPDGLT-PPTKNVVRRRFLK 390
            Q +LRL  P+ +KQ  RE+V  G     +G+ F    K  RR  FT +   Y A+LVDLPCI+E QKT ++  ++K  D+ QML+V    +D+     + S +S V   E +PDGLT PP KNV +RRF K
Sbjct:   74 QFILRLMVPEDVKQKFREKVKTGKFTDDIGIIF----KDPRRAIFTFENQKYRAKLVDLPCIIEAQKTFNKIQYYKVADICQMLVVESQIQDDEQLFTENSKSSNVDEFE-WPDGLTTPPLKNVRKRRFRK 199
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BLAST of mRNA_F-serratus_M_contig111.1034.1 vs. uniprot
Match: A0A286UHB2_9AGAM (Transcription initiation factor tfiid 55 kDa subunit n=1 Tax=Pyrrhoderma noxium TaxID=2282107 RepID=A0A286UHB2_9AGAM)

HSP 1 Score: 86.7 bits (213), Expect = 3.360e-15
Identity = 65/173 (37.57%), Postives = 93/173 (53.76%), Query Frame = 1 
Query:   22 QLVLRLPDG-----LKQTMRER-VGNDIGLVGVEFAPVKKGSRRFTFTMDENIYPARLVDLPCILETQKTLDRTTFFKSGDVGQMLIVYKDENAYKRDESNASGVGPQE-LFPDGLTPPTKNVVRRRFLKARPDRRKFKRTEARFSFCIHVIRVESQVLKIQQDGSLPEGSDS 519
            Q +LR+P G     L++ +  R +GND+     +F    K SRR  F M  N+Y ++LVDLPCI+E+QKTLD    FK  D+ QML+V +D+   +   SN  G    E ++P G+TPP  +V +RRF K R ++R  +  E      +      SQV     D   P+ SDS
Sbjct:  105 QFILRVPPGEDCEKLRKAVAARDIGNDVWF---KF----KDSRRAVFHMGNNLYSSKLVDLPCIIESQKTLDNKQMFKVADICQMLVV-EDKIESEEAVSNQRGFNIDEFIWPHGITPPLHHVRKRRFRK-RVNKRTIETVEQEVERLLEEDAKASQVQYTVLDNVNPDLSDS 268
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BLAST of mRNA_F-serratus_M_contig111.1034.1 vs. uniprot
Match: A0A7S3JUW2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUW2_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 3.870e-15
Identity = 59/146 (40.41%), Postives = 82/146 (56.16%), Query Frame = 1 
Query:    1 MSSTTYRQLVLRL--PDGLKQTMRERV-----GNDIGLVGVEF-APVKKGSRRFTFTMDENIYPARLVDLPCILETQKTLDR-TTFFKSGDVGQMLIVYKDENAYKRDESNASGVGPQELFPDGLTPPTKNVVRRRFLKARPDRRK 411
            MS+T   QL+L    PD L + + E V     G ++ +V  E  A   + SRR    +  + YP RLV+LP ++ET KT D     +K GDVGQ++IVY++E A + DE        Q ++ DG++PP KN V RRF KAR  R K
Sbjct:    1 MSTTVQTQLLLHAESPDVLAK-LSELVDAAEGGGELEIVAEEREANENESSRRMKLVIMGHTYPTRLVNLPTLVETHKTFDNGKNVYKCGDVGQVVIVYQNEAARRADEGRTIHKAWQHVYQDGISPPLKNCVERRFAKARRRRAK 145
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig111.1034.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G280_ECTSI9.610e-10069.46TAFII55_N domain-containing protein n=2 Tax=Ectoca... [more]
A0A835YLK6_9STRA2.770e-3447.80TAFII55 protein conserved region-domain-containing... [more]
A0A7S2RHU4_9STRA2.210e-1838.07Hypothetical protein (Fragment) n=2 Tax=Rhizochrom... [more]
A0A397VEC4_9GLOM5.180e-1738.73TAFII55 protein conserved region-domain-containing... [more]
A0A397SH43_9GLOM6.850e-1744.03TAFII55 protein conserved region-domain-containing... [more]
A0A8J2T034_9STRA2.400e-1647.41Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A397IKD7_9GLOM1.710e-1538.82TAFII55_N domain-containing protein n=1 Tax=Divers... [more]
U9UHV9_RHIID2.160e-1542.75TAFII55_N domain-containing protein (Fragment) n=1... [more]
A0A286UHB2_9AGAM3.360e-1537.57Transcription initiation factor tfiid 55 kDa subun... [more]
A0A7S3JUW2_9STRA3.870e-1540.41Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig111contigF-serratus_M_contig111:148852..151647 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score310.8
Seed ortholog evalue7.5e-82
Seed eggNOG ortholog2880.D7G280
Preferred nameTAF7
KEGG koko:K03132,ko:K19721
KEGG Pathwayko03022,ko04974,map03022,map04974
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000122,GO:0000123,GO:0000296,GO:0000428,GO:0001067,GO:0001932,GO:0001933,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0003712,GO:0003713,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005669,GO:0005737,GO:0005794,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006357,GO:0006366,GO:0006367,GO:0006469,GO:0006725,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006928,GO:0007154,GO:0007165,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0008134,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009719,GO:0009725,GO:0009755,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010563,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010639,GO:0010646,GO:0012505,GO:0014070,GO:0015696,GO:0015846,GO:0015893,GO:0016043,GO:0016070,GO:0016591,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019899,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023052,GO:0030154,GO:0030234,GO:0030317,GO:0030518,GO:0030520,GO:0030522,GO:0030880,GO:0031056,GO:0031057,GO:0031248,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031400,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032504,GO:0032774,GO:0032870,GO:0032991,GO:0033043,GO:0033044,GO:0033276,GO:0033673,GO:0033993,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034708,GO:0035034,GO:0035035,GO:0035065,GO:0035067,GO:0035097,GO:0035257,GO:0040011,GO:0042221,GO:0042325,GO:0042326,GO:0042493,GO:0042809,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043254,GO:0043401,GO:0043549,GO:0043933,GO:0044085,GO:0044087,GO:0044092,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044665,GO:0044703,GO:0044798,GO:0045859,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045936,GO:0045944,GO:0046483,GO:0046966,GO:0046982,GO:0046983,GO:0048232,GO:0048468,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048583,GO:0048609,GO:0048856,GO:0048869,GO:0048870,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051123,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051338,GO:0051348,GO:0051427,GO:0051674,GO:0051704,GO:0051716,GO:0055029,GO:0060255,GO:0060260,GO:0061695,GO:0065003,GO:0065004,GO:0065007,GO:0065009,GO:0070013,GO:0070461,GO:0070887,GO:0070897,GO:0071310,GO:0071339,GO:0071383,GO:0071396,GO:0071407,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0090575,GO:0097159,GO:0097659,GO:0097722,GO:0098772,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901796,GO:1901983,GO:1901984,GO:1902275,GO:1902493,GO:1902494,GO:1902531,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1905268,GO:1990234,GO:2000112,GO:2000113,GO:2000142,GO:2000756,GO:2000757,GO:2001141,GO:2001251
EggNOG free text desc.chromosome segregation
EggNOG OGsCOG5414@1,KOG4011@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00536,ko03021,ko03036
Exons5
Model size1005
Cds size1005
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig111.1034.1prot_F-serratus_M_contig111.1034.1Fucus serratus malepolypeptideF-serratus_M_contig111 148852..151647 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928992.8513007-CDS-F-serratus_M_contig111:148851..1489851622928992.8513007-CDS-F-serratus_M_contig111:148851..148985Fucus serratus maleCDSF-serratus_M_contig111 148852..148985 +
1690962660.1357086-CDS-F-serratus_M_contig111:148851..1489851690962660.1357086-CDS-F-serratus_M_contig111:148851..148985Fucus serratus maleCDSF-serratus_M_contig111 148852..148985 +
1622928992.863016-CDS-F-serratus_M_contig111:149266..1494051622928992.863016-CDS-F-serratus_M_contig111:149266..149405Fucus serratus maleCDSF-serratus_M_contig111 149267..149405 +
1690962660.1454892-CDS-F-serratus_M_contig111:149266..1494051690962660.1454892-CDS-F-serratus_M_contig111:149266..149405Fucus serratus maleCDSF-serratus_M_contig111 149267..149405 +
1622928992.9215267-CDS-F-serratus_M_contig111:150065..1502421622928992.9215267-CDS-F-serratus_M_contig111:150065..150242Fucus serratus maleCDSF-serratus_M_contig111 150066..150242 +
1690962660.153118-CDS-F-serratus_M_contig111:150065..1502421690962660.153118-CDS-F-serratus_M_contig111:150065..150242Fucus serratus maleCDSF-serratus_M_contig111 150066..150242 +
1622928992.9348483-CDS-F-serratus_M_contig111:150696..1511131622928992.9348483-CDS-F-serratus_M_contig111:150696..151113Fucus serratus maleCDSF-serratus_M_contig111 150697..151113 +
1690962660.1605048-CDS-F-serratus_M_contig111:150696..1511131690962660.1605048-CDS-F-serratus_M_contig111:150696..151113Fucus serratus maleCDSF-serratus_M_contig111 150697..151113 +
1622928992.9487414-CDS-F-serratus_M_contig111:151509..1516471622928992.9487414-CDS-F-serratus_M_contig111:151509..151647Fucus serratus maleCDSF-serratus_M_contig111 151510..151647 +
1690962660.1767113-CDS-F-serratus_M_contig111:151509..1516471690962660.1767113-CDS-F-serratus_M_contig111:151509..151647Fucus serratus maleCDSF-serratus_M_contig111 151510..151647 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig111.1034.1

>prot_F-serratus_M_contig111.1034.1 ID=prot_F-serratus_M_contig111.1034.1|Name=mRNA_F-serratus_M_contig111.1034.1|organism=Fucus serratus male|type=polypeptide|length=335bp
MSSTTYRQLVLRLPDGLKQTMRERVGNDIGLVGVEFAPVKKGSRRFTFTM
DENIYPARLVDLPCILETQKTLDRTTFFKSGDVGQMLIVYKDENAYKRDE
SNASGVGPQELFPDGLTPPTKNVVRRRFLKARPDRRKFKRTEARFSFCIH
VIRVESQVLKIQQDGSLPEGSDSTKRLVGNGGSSSSSAAGGGAAGGAASG
GGGGGSSSRPGGAGGGGSSRSLRPTGGDSSRGRSGGGGVGNGGSNGGAGG
GVGETVTFEHEEIVEFEPWMADPEMAAVGRLEGVTIEARITGPTQKLEAD
NTGQSSLSHPAPPPLPRLFDSELLYEHPEMLLAAV
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mRNA from alignment at F-serratus_M_contig111:148852..151647+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig111.1034.1 ID=mRNA_F-serratus_M_contig111.1034.1|Name=mRNA_F-serratus_M_contig111.1034.1|organism=Fucus serratus male|type=mRNA|length=2796bp|location=Sequence derived from alignment at F-serratus_M_contig111:148852..151647+ (Fucus serratus male)
ATGTCCTCTACGACGTACAGGCAGCTCGTCCTGAGGTTGCCGGACGGTCT
GAAGCAGACCATGCGGGAAAGGGTGGGGAATGACATCGGGCTAGTCGGGG
TCGAATTCGCCCCGGTGAAGAAAGGCAGCCGAAGGTACGGTGGTATACGA
ATAGGTTCTTCACCAACGTTGCTCTCCGTGATAACTTGTGATGTCACATC
GTGGAACAGACGCAAAATGGCTTTCCATTGTCGCCACGCTCGATGGTGCA
CGAAGGAGAAGTAAAACAAAAGTAGAGCCCGCAAACGCAGGCCCCAGCTG
CTTATCCGTTTCGCGCTCGTGCGCCCCCCATTCCATTGCCGGCGAGGTGC
GACGTGTAACCTGTACCGCCGCGCGCCTGTTCCACCGCCCCCACGGTATA
TTGACCGCCTCTAAGGTTCACGTTCACGATGGACGAAAATATTTATCCCG
CTCGCCTGGTAGACCTTCCGTGCATCCTGGAGACCCAAAAAACGTTGGAC
AGGACAACGTTCTTCAAGAGCGGGGACGTCGGCCAGATGCTGATCGTCTA
CAAGGTTGAGGCGTGCCACTATCTTTGCCGTTGAAAATTATTGGGAACGG
GACAAACGAAAATGAAGCAAGAACGTCCCAAAAGCGAACACACTAGGTGC
GCGGAGACCTCGCAAAAAACAATCTATTCGAGAGGTCTCCCTCCTTCTTC
CAGAGCTTGCGAATTGCTAGCGCGGGACCGGGGCGTGCTCTTCCCCTTTT
TATTTCCGTTTTCTTCTTTTTTCTATACTTTTAAGGCAATACAGTAGCGA
AACGGGCATATTGGTTTCGTGGTCAGCTTAAGATTTTTTATCGATTTCTT
TCGAGACCTAGGAGTTCATAAGAGTGAGTAGTCGATACACGCCTTGGGCT
AAAGCTGCACCGCGTCTTGGCCTTCCGCGGCTCATTGAAGAGCCCGAGAA
GTGCAAAAAATGCCATCAGTGGTGGGTTTTTGTCCTGCCTCCTCCACGTC
CACGAACACGAGAAGCCAGAGGGAAAGTACCCCAAAGTCTATACAACTCC
CTCACTTCCTTCCCCCGTTTGTCTTTGCCCTTTTGTTTTCTGTTGAAATT
GGAGCGGTTTTTCCTTCTCGGCGCCCTGCTGCACGCCTTTCAAATGGTTT
CGATTTCAACACCATGCCTCCCTTCCCCCTCCAATACATACTCCGTGTTT
ATTAATTTTAAAAGGATGAAAACGCTTACAAGAGGGACGAGAGCAACGCC
TCCGGGGTGGGCCCGCAAGAGCTTTTCCCGGACGGGCTCACCCCTCCCAC
GAAGAACGTAGTTCGGAGGCGTTTTCTCAAGGCTCGGCCAGACCGGCGAA
AGTTTAAGCGAACGGAGGCGAGATTCTCGTTCTGTATCCATGTGTTTTGC
CTGTCTGTTTACTATGTCCACGCTTGTGTTTCAAGGTTTTGGTTTGAAAT
CTATATATTTCGTCTTCGACGTTTTGTTGCGGTTTCCCTCTCTCTGTTCA
AAATACACGATCTCGTGTGTCTACCTGTAATTGTAACTGTAATTGTAAGA
GAAATGAAGATCGGGGATGAAAGCATGGAACGGAACAGCGAAACCATGGC
GCGGAAGTGTTTGCTCTGTGCAGGCAGAGCCTCTAGAGAGTTACACAAGC
CCTCTCCATGCCCCCCCCCCCCCCCCGCCCCTCTATATAGCTCCTCGCCC
GTCGGGATTCCCAAATACATCAGGCTGTTGTTCGTCCTTCCGAGTCCCCT
CCTCCGTTGCCTTACGATACATGTAGATTATTGTACACATGGCTCTCTCT
GGACATGAAAACAGAGGCAATCGAACCTGTATTCTAAAAAATCAGGTCAT
TCGCGTGGAGAGCCAGGTGCTCAAAATACAACAAGATGGTTCTCTCCCGG
AAGGTTCTGACAGCACCAAGAGGCTCGTGGGGAACGGCGGCTCCTCCTCT
TCCTCAGCCGCCGGTGGGGGTGCCGCCGGGGGTGCCGCCAGTGGGGGCGG
GGGCGGAGGAAGCTCGTCGCGACCTGGTGGGGCGGGGGGTGGGGGATCTT
CAAGGAGTCTCCGCCCCACGGGGGGCGATAGCTCTAGGGGACGGAGCGGC
GGTGGTGGCGTCGGGAACGGTGGGAGTAACGGGGGCGCGGGGGGCGGGGT
AGGGGAGACCGTGACATTCGAGCACGAGGAGATCGTGGAGTTCGAGCCGT
GGATGGCGGACCCCGAGATGGCGGCTGTCGGGCGACTGGAAGGGGTCACG
ATTGAGGCAAGAGTTAAAGAGAGCGAGAACGAGAGAGAGAAACAACTACA
GAGGAGAGATGATGATAGAAACGCACTTCAGAAGCGATGGTTGGCGGGAG
TGAGGCGGCCGGTACCCCAATATTTAGGATAGACTACTGGTATACTCCGG
AGTAGCTATACAACAGTTAGAGCTCTAGAGTGGGAAGGGGGCTGTCTGAT
GGTTGGAAGAGGGGAGCTGATCGATATTTCACCGCGGCGCTTGATAGCGA
GGGTGGTGGTCGGATCGGCTCTTGCGATCGTTGGCTCACGTAGTTGACCG
TTTTCAGAGAGAAACAAAAGAAAACGAATCCCACGAAGCATAATTGCTCG
ATTCTCCATCGCCATCTCTATATTTCTCCAAGTCAATCCCCTCGGTTCTA
CTCGGCAGATTACCGGACCTACCCAGAAGCTGGAAGCGGATAATACTGGT
CAGAGCAGCTTAAGCCACCCTGCGCCGCCGCCGCTGCCGCGCTTGTTTGA
CTCCGAGCTTCTCTACGAACACCCGGAGATGTTGCTGGCAGCGGTG
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Coding sequence (CDS) from alignment at F-serratus_M_contig111:148852..151647+

>mRNA_F-serratus_M_contig111.1034.1 ID=mRNA_F-serratus_M_contig111.1034.1|Name=mRNA_F-serratus_M_contig111.1034.1|organism=Fucus serratus male|type=CDS|length=2010bp|location=Sequence derived from alignment at F-serratus_M_contig111:148852..151647+ (Fucus serratus male)
ATGTCCTCTACGACGTACAGGCAGCTCGTCCTGAGGTTGCCGGACGGTCT
GAAGCAGACCATGCGGGAAAGGGTGGGGAATGACATCGGGCTAGTCGGGG
TCGAATTCGCCCCGGTGAAGAAAGGCAGCCGAAGATGTCCTCTACGACGT
ACAGGCAGCTCGTCCTGAGGTTGCCGGACGGTCTGAAGCAGACCATGCGG
GAAAGGGTGGGGAATGACATCGGGCTAGTCGGGGTCGAATTCGCCCCGGT
GAAGAAAGGCAGCCGAAGGTTCACGTTCACGATGGACGAAAATATTTATC
CCGCTCGCCTGGTAGACCTTCCGTGCATCCTGGAGACCCAAAAAACGTTG
GACAGGACAACGTTCTTCAAGAGCGGGGACGTCGGCCAGATGCTGATCGT
CTACAAGGTTCACGTTCACGATGGACGAAAATATTTATCCCGCTCGCCTG
GTAGACCTTCCGTGCATCCTGGAGACCCAAAAAACGTTGGACAGGACAAC
GTTCTTCAAGAGCGGGGACGTCGGCCAGATGCTGATCGTCTACAAGGATG
AAAACGCTTACAAGAGGGACGAGAGCAACGCCTCCGGGGTGGGCCCGCAA
GAGCTTTTCCCGGACGGGCTCACCCCTCCCACGAAGAACGTAGTTCGGAG
GCGTTTTCTCAAGGCTCGGCCAGACCGGCGAAAGTTTAAGCGAACGGAGG
CGAGATTCTCGTTCTGTATCCATGATGAAAACGCTTACAAGAGGGACGAG
AGCAACGCCTCCGGGGTGGGCCCGCAAGAGCTTTTCCCGGACGGGCTCAC
CCCTCCCACGAAGAACGTAGTTCGGAGGCGTTTTCTCAAGGCTCGGCCAG
ACCGGCGAAAGTTTAAGCGAACGGAGGCGAGATTCTCGTTCTGTATCCAT
GTCATTCGCGTGGAGAGCCAGGTGCTCAAAATACAACAAGATGGTTCTCT
CCCGGAAGGTTCTGACAGCACCAAGAGGCTCGTGGGGAACGGCGGCTCCT
CCTCTTCCTCAGCCGCCGGTGGGGGTGCCGCCGGGGGTGCCGCCAGTGGG
GGCGGGGGCGGAGGAAGCTCGTCGCGACCTGGTGGGGCGGGGGGTGGGGG
ATCTTCAAGGAGTCTCCGCCCCACGGGGGGCGATAGCTCTAGGGGACGGA
GCGGCGGTGGTGGCGTCGGGAACGGTGGGAGTAACGGGGGCGCGGGGGGC
GGGGTAGGGGAGACCGTGACATTCGAGCACGAGGAGATCGTGGAGTTCGA
GCCGTGGATGGCGGACCCCGAGATGGCGGCTGTCGGGCGACTGGAAGGGG
TCACGATTGAGGCAAGAGTCATTCGCGTGGAGAGCCAGGTGCTCAAAATA
CAACAAGATGGTTCTCTCCCGGAAGGTTCTGACAGCACCAAGAGGCTCGT
GGGGAACGGCGGCTCCTCCTCTTCCTCAGCCGCCGGTGGGGGTGCCGCCG
GGGGTGCCGCCAGTGGGGGCGGGGGCGGAGGAAGCTCGTCGCGACCTGGT
GGGGCGGGGGGTGGGGGATCTTCAAGGAGTCTCCGCCCCACGGGGGGCGA
TAGCTCTAGGGGACGGAGCGGCGGTGGTGGCGTCGGGAACGGTGGGAGTA
ACGGGGGCGCGGGGGGCGGGGTAGGGGAGACCGTGACATTCGAGCACGAG
GAGATCGTGGAGTTCGAGCCGTGGATGGCGGACCCCGAGATGGCGGCTGT
CGGGCGACTGGAAGGGGTCACGATTGAGGCAAGAATTACCGGACCTACCC
AGAAGCTGGAAGCGGATAATACTGGTCAGAGCAGCTTAAGCCACCCTGCG
CCGCCGCCGCTGCCGCGCTTGTTTGACTCCGAGCTTCTCTACGAACACCC
GGAGATGTTGCTGGCAGCGGTGATTACCGGACCTACCCAGAAGCTGGAAG
CGGATAATACTGGTCAGAGCAGCTTAAGCCACCCTGCGCCGCCGCCGCTG
CCGCGCTTGTTTGACTCCGAGCTTCTCTACGAACACCCGGAGATGTTGCT
GGCAGCGGTG
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