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Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000306 | FYVE zinc finger | SMART | SM00064 | fyve_4 | coord: 50..114
e-value: 0.0021
score: 16.8 |
| IPR000306 | FYVE zinc finger | PFAM | PF01363 | FYVE | coord: 58..111
e-value: 1.0E-7
score: 31.9 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 51..123
e-value: 2.2E-11
score: 45.4 |
| None | No IPR available | PANTHER | PTHR13510 | FYVE-FINGER-CONTAINING RAB5 EFFECTOR PROTEIN RABENOSYN-5-RELATED | coord: 52..396 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 1..538 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 567..568 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 539..566 |
| None | No IPR available | TMHMM | TMhelix | | coord: 544..566 |
| IPR017455 | Zinc finger, FYVE-related | PROSITE | PS50178 | ZF_FYVE | coord: 55..113
score: 10.378 |
| IPR011011 | Zinc finger, FYVE/PHD-type | SUPERFAMILY | 57903 | FYVE/PHD zinc finger | coord: 57..120 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_F-serratus_M_contig111.1038.1 ID=prot_F-serratus_M_contig111.1038.1|Name=mRNA_F-serratus_M_contig111.1038.1|organism=Fucus serratus male|type=polypeptide|length=569bp
MMMAADSTASENSHNNDIPASPPRTTSERTAKPGRQPSTTQAGFRAIRGE
ASPRRTGMSNCSVCDTKFTIFEHRHICQKCQEPVCNRCSRSRKVFLAGTR
PKRVCDNCVQTFPSATKIVSDMSNTIESGNRSRLTLPASEATDTCAERTM
LSPSPATSFFGIGMGGMPSPPRLPPPTPAGGDDSAPTPLATAFARFRVEA
KAVFGGRRASGDIVENKKPEIPTAAATKVKTPPSSSSPPPAQQQDRVQGD
MELVTNGDQGQAGSGDKGPDFNSAMSAADVVPVVAAAEMQEDAEASHAQV
TNEAADTFDRTVPGLDVSHFSSTAACTPTNYFTAAAAAPDYHKTDMQISI
HSEVSDGDVVPLCPHETNEGDTVDGAPVEFKITAAETTAGANPTPFLAAL
GPSIAAPASHSTTASQSQQDQEVVRNEVAVKDTDGSQPEETGKTDIVNGA
ELKAAEIDVSINTTVDILASATPSTGMPAFAAPELSPEEASETSGTVQTN
AVDGTSPPAPEEHHTEKDSETAAANSALTSSKKSGVCLIWMHFTIEVWGC
LAAVFMGLAVGLLLLVRD* back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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