prot_F-serratus_M_contig110.949.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig110.949.1
Unique Name	prot_F-serratus_M_contig110.949.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	533

Homology

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BLAST of mRNA_F-serratus_M_contig110.949.1 vs. uniprot
Match: A0A6H5L0W0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L0W0_9PHAE)

HSP 1 Score: 395 bits (1015), Expect = 4.140e-129
Identity = 229/529 (43.29%), Postives = 331/529 (62.57%), Query Frame = 0

Query:    8 WWQNISAYESDYVPRSYNPTSAVVSDHNLLEGLRENEFDTKDSSYTNGLLTLGLVFLISGAVASCLLPILYTKFVRKSMQERIEERLKFGRRSHIEGNLLMVLVSVMAVACASGVIWGFQRADSVLTIVAAGTQGMTSDVAAVLTLPADTADALDGVSTSYDALVDDVESCTEEFSSIPVISNVLDGIFDALSATSDVVNSLVDDVQDEVDDLNEDXLXXXXXXXXGVTDAIDTTEEIRKGLVWPLISLSIFMIVVFIAIALGTYEFVAWGINDCGCISCFVCPCGILIVIIIWLLTVVAVSLSALSGDFCIDPDSSAQTLVVNDAEEDLSTGEEALLAEIITYYTGGCTSNNSISEVLITSQEVAVPLIQGILSSSTEISSGLTSAGCHVSSAVDELNQTLWDFWVILENAVNLTSCENINGQYQSVVYDEFCDNLPRALLGFWVSGVILTVLLLLLVALWNRMLRQKRADEEAAGIEARGSWSLRGAINSSRWSRRN--AKEPSE----HTNVTRPVEYAAPQDTSR 530
            W+  IS Y SDY P ++ P  +V ++H+LL+GLREN+FD +D+ Y+ GL+TL +VFL++G +            +  S QER+ ER+KFG+++H  GN+LMVL SV A+A A+G IWG QRADS LT +   TQ M +D+  +L L  DT+ ALD V+ SY+AL + V+ C        ++S++LD  FD        +NSL   VQ E+DD++ED           ++DA+  TE  RKGL+WP++ LS+     F+A+++ TYE VA+G  DC   SC + PC I + ++IW+   +AVSLSAL+GDFCIDPD++A  L+ ++ +     GE   +A++ITYYTG CTS N+  + +IT+QEVAVP+IQ ++ +  +    L +A   ++  V  L+ +L  FW ILE+A  L+SCEN+NG YQ+ VYDE C  LP+ LLGFWVS   LTVLLL+L   W RMLRQ+  +E+A+  EA         + S R+SRRN  A  P+      ++V RPV    PQ  ++
Sbjct:   12 WYDKISVYSSDYEPATFTPGPSVEANHDLLDGLRENDFDVEDAQYSAGLVTLIIVFLVAGLLXXXXXXX-XXXXLGTSRQERLRERMKFGKQTHYGGNILMVLASVAAIASAAGAIWGLQRADSGLTNIEDATQNMATDMLTILNLANDTSVALDQVTASYEALQESVDGCDNG----AILSSLLDA-FD--------INSLTASVQAEIDDVSEDNFGELADDVQAISDAVSDTEGARKGLLWPVLILSLMFTAFFVAVSVSTYECVAFGYRDCAPASCCINPCTIFVAVVIWICAALAVSLSALTGDFCIDPDANANELITDNTD-----GE---IADLITYYTGDCTSENAAVDAIITAQEVAVPIIQSVVPTLYQ----LEAACSDLAEPVQTLDNSLESFWTILEDAGELSSCENLNGLYQAAVYDELCKGLPQGLLGFWVSCAFLTVLLLILAIQWGRMLRQQTTEEDASTAEAMNRQRAGWLVVSKRFSRRNFVANPPAPPHGASSHVQRPVALERPQHATQ 514

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig110.949.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig110.949.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5L0W0_9PHAE	4.140e-129	43.29	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006990	Tweety	PFAM	PF04906	Tweety	coord: 42..477 e-value: 4.0E-10 score: 38.9
IPR006990	Tweety	PANTHER	PTHR12424	TWEETY-RELATED	coord: 18..509
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 314..448
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 249..272
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 449..469
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 102..126
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 56..81
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 127..248
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 284..313
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 273..283
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..55
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 470..532
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 82..101
None	No IPR available	TMHMM	TMhelix		coord: 55..77
None	No IPR available	TMHMM	TMhelix		coord: 250..272
None	No IPR available	TMHMM	TMhelix		coord: 285..307
None	No IPR available	TMHMM	TMhelix		coord: 104..126
None	No IPR available	TMHMM	TMhelix		coord: 447..469

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig110	contig	F-serratus_M_contig110:426233..438658 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig110.949.1	mRNA_F-serratus_M_contig110.949.1	Fucus serratus male	mRNA	F-serratus_M_contig110 426112..438710 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig110.949.1 ID=prot_F-serratus_M_contig110.949.1|Name=mRNA_F-serratus_M_contig110.949.1|organism=Fucus serratus male|type=polypeptide|length=533bp
MSSDNNNWWQNISAYESDYVPRSYNPTSAVVSDHNLLEGLRENEFDTKDS
SYTNGLLTLGLVFLISGAVASCLLPILYTKFVRKSMQERIEERLKFGRRS
HIEGNLLMVLVSVMAVACASGVIWGFQRADSVLTIVAAGTQGMTSDVAAV
LTLPADTADALDGVSTSYDALVDDVESCTEEFSSIPVISNVLDGIFDALS
ATSDVVNSLVDDVQDEVDDLNEDVLSQLVDDVQGVTDAIDTTEEIRKGLV
WPLISLSIFMIVVFIAIALGTYEFVAWGINDCGCISCFVCPCGILIVIII
WLLTVVAVSLSALSGDFCIDPDSSAQTLVVNDAEEDLSTGEEALLAEIIT
YYTGGCTSNNSISEVLITSQEVAVPLIQGILSSSTEISSGLTSAGCHVSS
AVDELNQTLWDFWVILENAVNLTSCENINGQYQSVVYDEFCDNLPRALLG
FWVSGVILTVLLLLLVALWNRMLRQKRADEEAAGIEARGSWSLRGAINSS
RWSRRNAKEPSEHTNVTRPVEYAAPQDTSRWG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006990	Tweety