mRNA_F-serratus_M_contig110.949.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig110.949.1 vs. uniprot
Match: A0A6H5L0W0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L0W0_9PHAE) HSP 1 Score: 394 bits (1013), Expect = 5.230e-128 Identity = 229/529 (43.29%), Postives = 331/529 (62.57%), Query Frame = 2
Query: 74 WWQNISAYESDYVPRSYNPTSAVVSDHNLLEGLRENEFDTKDSSYTNGLLTLGLVFLISGAVASCLLPILYTKFVRKSMQERIEERLKFGRRSHIEGNLLMVLVSVMAVACASGVIWGFQRADSVLTIVAAGTQGMTSDVAAVLTLPADTADALDGVSTSYDALVDDVESCTEEFSSIPVISNVLDGIFDALSATSDVVNSLVDDVQDEVDDLNEDXLXXXXXXXXGVTDAIDTTEEIRKGLVWPLISLSIFMIVVFIAIALGTYEFVAWGINDCGCISCFVCPCGILIVIIIWLLTVVAVSLSALSGDFCIDPDSSAQTLVVNDAEEDLSTGEEALLAEIITYYTGGCTSNNSISEVLITSQEVAVPLIQGILSSSTEISSGLTSAGCHVSSAVDELNQTLWDFWVILENAVNLTSCENINGQYQSVVYDEFCDNLPRALLGFWVSGVILTVLLLLLVALWNRMLRQKRADEEAAGIEARGSWSLRGAINSSRWSRRN--AKEPSE----HTNVTRPVEYAAPQDTSR 1642
W+ IS Y SDY P ++ P +V ++H+LL+GLREN+FD +D+ Y+ GL+TL +VFL++G + + S QER+ ER+KFG+++H GN+LMVL SV A+A A+G IWG QRADS LT + TQ M +D+ +L L DT+ ALD V+ SY+AL + V+ C ++S++LD FD +NSL VQ E+DD++ED ++DA+ TE RKGL+WP++ LS+ F+A+++ TYE VA+G DC SC + PC I + ++IW+ +AVSLSAL+GDFCIDPD++A L+ ++ + GE +A++ITYYTG CTS N+ + +IT+QEVAVP+IQ ++ + + L +A ++ V L+ +L FW ILE+A L+SCEN+NG YQ+ VYDE C LP+ LLGFWVS LTVLLL+L W RMLRQ+ +E+A+ EA + S R+SRRN A P+ ++V RPV PQ ++
Sbjct: 12 WYDKISVYSSDYEPATFTPGPSVEANHDLLDGLRENDFDVEDAQYSAGLVTLIIVFLVAGLLXXXXXXX-XXXXLGTSRQERLRERMKFGKQTHYGGNILMVLASVAAIASAAGAIWGLQRADSGLTNIEDATQNMATDMLTILNLANDTSVALDQVTASYEALQESVDGCDNG----AILSSLLDA-FD--------INSLTASVQAEIDDVSEDNFGELADDVQAISDAVSDTEGARKGLLWPVLILSLMFTAFFVAVSVSTYECVAFGYRDCAPASCCINPCTIFVAVVIWICAALAVSLSALTGDFCIDPDANANELITDNTD-----GE---IADLITYYTGDCTSENAAVDAIITAQEVAVPIIQSVVPTLYQ----LEAACSDLAEPVQTLDNSLESFWTILEDAGELSSCENLNGLYQAAVYDELCKGLPQGLLGFWVSCAFLTVLLLILAIQWGRMLRQQTTEEDASTAEAMNRQRAGWLVVSKRFSRRNFVANPPAPPHGASSHVQRPVALERPQHATQ 514 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig110.949.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig110.949.1 >prot_F-serratus_M_contig110.949.1 ID=prot_F-serratus_M_contig110.949.1|Name=mRNA_F-serratus_M_contig110.949.1|organism=Fucus serratus male|type=polypeptide|length=533bp MSSDNNNWWQNISAYESDYVPRSYNPTSAVVSDHNLLEGLRENEFDTKDSback to top mRNA from alignment at F-serratus_M_contig110:426112..438710- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig110.949.1 ID=mRNA_F-serratus_M_contig110.949.1|Name=mRNA_F-serratus_M_contig110.949.1|organism=Fucus serratus male|type=mRNA|length=12599bp|location=Sequence derived from alignment at F-serratus_M_contig110:426112..438710- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig110:426112..438710- >mRNA_F-serratus_M_contig110.949.1 ID=mRNA_F-serratus_M_contig110.949.1|Name=mRNA_F-serratus_M_contig110.949.1|organism=Fucus serratus male|type=CDS|length=3198bp|location=Sequence derived from alignment at F-serratus_M_contig110:426112..438710- (Fucus serratus male)back to top |