mRNA_F-serratus_M_contig1094.870.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1094.870.1 vs. uniprot
Match: D8LN66_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN66_ECTSI) HSP 1 Score: 221 bits (564), Expect = 3.820e-64 Identity = 135/242 (55.79%), Postives = 155/242 (64.05%), Query Frame = 2 Query: 5 FCADIPARSRGGAA--DEDLRFTYKDSEGDDIVFDKDAELSLALRLSPESLEISAARKTK-----PHGPDRIYKVAARNLREYHGVPSMTPDKLTSTLDLLKLCPRRLTKQGLAPKKLLLEMM-------KDKRVPLADNETDEDLTETVCADMELMAVEDDTKRFDDDLVEGVADKPSSEEEVGEGATDEQPQCRVKMPIHMAFTAAGIKLHPREVRPLLVALGVHPRHFVKLGLIDAKDL 688 F A++P RS GG A D DL FTYKD +GDDIVFDKD+EL LA+RL P SLEISAA K K P R+YK+AARNLREY+GVPSMTP KL TL LKL P+RL KQGLAPK LL M K +VPL D + +EDL E+V A MELM++EDD K ++D V SS + E D K IH AF A GI+L PREVRPLLVAL V P KLGL+D KDL Sbjct: 52 FDAELPVRSPGGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAMRLCPGSLEISAAGKEKKAAEMPDSEARLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKNLLPRMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSLEDDKKEWNDGFVSVEPADTSSPDNDNEEKNDAVAPEVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDL 293
BLAST of mRNA_F-serratus_M_contig1094.870.1 vs. uniprot
Match: A0A6H5JPU3_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPU3_9PHAE) HSP 1 Score: 213 bits (543), Expect = 5.550e-61 Identity = 130/242 (53.72%), Postives = 154/242 (63.64%), Query Frame = 2 Query: 5 FCADIPARSRGGAA--DEDLRFTYKDSEGDDIVFDKDAELSLALRLSPESLEISAARKTK-----PHGPDRIYKVAARNLREYHGVPSMTPDKLTSTLDLLKLCPRRLTKQGLAPKKLLLEMM-------KDKRVPLADNETDEDLTETVCADMELMAVEDDTKRFDDDLVEGVADKPSSEEEVGEGATDEQPQCRVKMPIHMAFTAAGIKLHPREVRPLLVALGVHPRHFVKLGLIDAKDL 688 F ++PARS G A D DL FTYKD +GDDIVFDK++EL LALRL P SLEISAA K P +++YK+AARNLREY+GVPSMTP KL TL LKL P+RL KQGLAPK LL M K +VPL D + +EDL E+V A MELM+VED K ++D V + S E D P+ + + IH AF A GI+L PREVRPLLVAL V P KLGL+ KDL Sbjct: 54 FDVELPARSSAGEAANDTDLSFTYKDPDGDDIVFDKESELQLALRLCPGSLEISAAGKENKATRMPDSEEKLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDGKKEWNDGFVSVEPAEISFPANDNEEKNDAAPEAKKNL-IHKAFIAGGIQLRPREVRPLLVALDVLPYRLAKLGLVGGKDL 294
BLAST of mRNA_F-serratus_M_contig1094.870.1 vs. uniprot
Match: D8LN68_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN68_ECTSI) HSP 1 Score: 214 bits (544), Expect = 1.540e-60 Identity = 133/242 (54.96%), Postives = 154/242 (63.64%), Query Frame = 2 Query: 5 FCADIPARSRGGAA--DEDLRFTYKDSEGDDIVFDKDAELSLALRLSPESLEISAARK-----TKPHGPDRIYKVAARNLREYHGVPSMTPDKLTSTLDLLKLCPRRLTKQGLAPKKLLLEMM-------KDKRVPLADNETDEDLTETVCADMELMAVEDDTKRFDDDLVEGVADKPSSEEEVGEGATDEQPQCRVKMPIHMAFTAAGIKLHPREVRPLLVALGVHPRHFVKLGLIDAKDL 688 F A++P RS G A D DL FTYKD +GDDIVFDKD+EL+LA+RL P SLEISAA K KP R+YK+AARNLREY+GVPSMTP KL TL L+L P+RL KQGLAPK LL M K +VPL D + +EDL E+V A MELM+VEDD K ++D V SS E D K IH AF A GI+L PREVRPLLVAL V P KLGL++ KDL Sbjct: 36 FDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPGSLEISAAGKENKPANKPDPEARLYKIAARNLREYNGVPSMTPLKLVKTLAFLELNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDDKKEWNDGFVSVEPADTSSPGNDNEEKNDAVAPEVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVNGKDL 277
BLAST of mRNA_F-serratus_M_contig1094.870.1 vs. uniprot
Match: A0A6H5KAY7_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY7_9PHAE) HSP 1 Score: 212 bits (539), Expect = 2.050e-60 Identity = 132/243 (54.32%), Postives = 157/243 (64.61%), Query Frame = 2 Query: 5 FCADIPARSRGGAA--DEDLRFTYKDSEGDDIVFDKDAELSLALRLSPESLEISAARK----TK-PHGPDRIYKVAARNLREYHGVPSMTPDKLTSTLDLLKLCPRRLTKQGLAPKKLLLEMMKD-------KRVPLADNETDEDLTETVCADMELMAVEDDTKRFDDDLVEGVADKPSSEEEVGEGATDEQ-PQCRVKMPIHMAFTAAGIKLHPREVRPLLVALGVHPRHFVKLGLIDAKDL 688 F ++P RS G A D DL FTYKD +GDDIVFDKD+EL+LALRL P SLEISAA K TK P + +YK+AARNLREY+GVPSMTP KL TL LKL P+RL KQGLAPK LL M + +V L D + +EDL E V A ME M+VEDD K ++D V + SS + E D+ P+ + + IH AF A GI+L PREVRPLLVAL V P KLGL+D KDL Sbjct: 63 FEVELPVRSLTGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLALRLCPGSLEISAAGKENKATKMPDSEETLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKMLLARMKAETANNAKLSKVRLGDGKNNEDLAEWVAAGMEFMSVEDDKKEWNDGFVSVEPAETSSSDNGNEEENDDAAPEVKQNL-IHKAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVDGKDL 304
BLAST of mRNA_F-serratus_M_contig1094.870.1 vs. uniprot
Match: A0A6H5KB69_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB69_9PHAE) HSP 1 Score: 213 bits (542), Expect = 7.110e-60 Identity = 135/252 (53.57%), Postives = 156/252 (61.90%), Query Frame = 2 Query: 5 FCADIPARSRGGAA--DEDLRFTYKDSEGDDIVFDKDAELSLALRLSPESLEISAARK-----TKPHGPDRIYKVAARNLREYHGVPSMTPDKLTSTLDLLKLCPRRLTKQGLAPKKLLLEM-------MKDKRVPLADNETDEDLTETVCADMELMAVEDDTKRFDDDLVEGVAD----------KPSSEEEVGEGATDEQPQCRVKMPIHMAFTAAGIKLHPREVRPLLVALGVHPRHFVKLGLIDAKDL 688 F A++P RS G A D DL FTYKD +GDDIVFDKD+EL+LA+RL P+SLEISAA K KP R+YK+AARNLREY+GVPSMT KL TL LKL PRRL KQGLAPK LL M MK +V L D E +EDL E+V A MELM+VEDD K ++ V D K SS + E D+ K IH AF A GI+L PREVRPLLVAL V P KLGL++ K L Sbjct: 36 FDAELPVRSPAGEATKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPDSLEISAAGKENKPDNKPDPEGRLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPRRLVKQGLAPKNLLARMKAEAANNMKVSKVTLGDGENNEDLAESVAAGMELMSVEDDKKECNNGFVSAKPDASAAAVPITAKTSSPDNDNEEENDDAAPEVKKNLIHTAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVNGKYL 287
BLAST of mRNA_F-serratus_M_contig1094.870.1 vs. uniprot
Match: A0A6H5JQ17_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ17_9PHAE) HSP 1 Score: 211 bits (538), Expect = 1.550e-59 Identity = 133/255 (52.16%), Postives = 157/255 (61.57%), Query Frame = 2 Query: 5 FCADIPARSRGGAA--DEDLRFTYKDSEGDDIVFDKDAELSLALRLSPESLEISAARKT-----KPHGPDRIYKVAARNLREYHGVPSMTPDKLTSTLDLLKLCPRRLTKQGLAPKKLLLEMM-------KDKRVPLADNETDEDLTETVCADMELMAVEDDTKRFDDDLVEGVADK-------------PSSEEEVGEGATDEQPQCRVKMPIHMAFTAAGIKLHPREVRPLLVALGVHPRHFVKLGLIDAKDL 688 F A++P RS G A D DL FTYKD +GDDIVFDKD+EL LA+RL P SLEISA K KP R+YK+AARNLREY+GVPSMT KL TL LKL P+RL KQGLAPK LL M K +VPL D + +EDL E+V A MELM+VEDD K ++D V +D P ++ E E D P+ + + IH AF GI+L PREVRPLLVAL V P KLGL+D KDL Sbjct: 54 FDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISATLKESEPAKKPDPEARLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDDKKEWNDGFVSAESDASAAAVPITAKTSTPDNDNE--EENNDAAPETKKDL-IHKAFITGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDL 305
BLAST of mRNA_F-serratus_M_contig1094.870.1 vs. uniprot
Match: D8LN82_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN82_ECTSI) HSP 1 Score: 181 bits (458), Expect = 6.780e-50 Identity = 116/227 (51.10%), Postives = 140/227 (61.67%), Query Frame = 2 Query: 5 FCADIPARSRGGAA--DEDLRFTYKDSEGDDIVFDKDAELSLALRLSPESLEISAARK-----TKPHGPDRIYKVAARNLREYHGVPSMTPDKLTSTLDLLKLCPRRLTKQGLAPKKLLLEMM-------KDKRVPLADNETDEDLTETVCADMELMAVEDDTKRFDDDLVEGVADKP-----------SSEEEVGEGATDEQPQCRVKMPIHMAFTAAGIKLHPRE 610 F A++P RS G A D DL FTYKD +GDDIVFDKD+EL LA+RL P SLEISAA K KP R+YK+AARNLREY+GVPSMTP KL TL LKL P+RL KQGLAPK LL M K +VPL D + +EDL ++V A MELM+VED K ++D V +D P S + + E D P+ + + IH AF A GI+L PRE Sbjct: 51 FDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISAALKESKPANKPDPEARLYKIAARNLREYNGVPSMTPPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLADSVAAGMELMSVED-KKEWNDGFVSAESDAPAAAAPITAETSSPDNDKEEENDDAAPEVKKNL-IHKAFIAGGIQLRPRE 275
BLAST of mRNA_F-serratus_M_contig1094.870.1 vs. uniprot
Match: A0A6H5KVV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVV7_9PHAE) HSP 1 Score: 105 bits (261), Expect = 5.730e-21 Identity = 77/184 (41.85%), Postives = 98/184 (53.26%), Query Frame = 2 Query: 197 IYKVAARNLREYHGVPSMTPDKLTSTLDLLKLCPRRLTKQGLAPKKLLLEMMKDKRVPLADNETDE-DLTETVCADMELMAVEDDTKRFDDDLVEGVADKPSSEEEVGE-GATDEQPQCRVKMPIHMAFTAAGIKLHPREVRPLLVALGVHPRHFVKLGLIDAKDLPRPPHHGRGRHGGKPCGP 742 +YK ARNLREYHGVPSMT D L T+ LL+L P RL QGLAP+KLL K AD D D + + +++E DD + DD + + + + + + R K P+H A AAGI L PRE RPLL ALGV P VKLGL+ ++L R R GG+ GP Sbjct: 26 LYKATARNLREYHGVPSMTADNLEKTMVLLRLRPGRLVVQGLAPEKLL------KGFSAADAHADTTDSSGSSGSEVEPEQA-DDNQVSDDXXXXXXXSGDTEHDNIRKHNSLGFETNKRSKHPVHAALVAAGITLRPRETRPLLRALGVGPHRLVKLGLVQREEL------RRSRPGGRRGGP 196
BLAST of mRNA_F-serratus_M_contig1094.870.1 vs. uniprot
Match: A0A6H5K3J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J2_9PHAE) HSP 1 Score: 71.2 bits (173), Expect = 4.210e-10 Identity = 60/156 (38.46%), Postives = 74/156 (47.44%), Query Frame = 2 Query: 197 IYKVAARNLREYHGVPSMTPDKLTSTLDLLKLCPRRLTKQGLAPKKLL-----------LEMMKDKRVPLADNETDEDLTETVCADMELMAVEDDTKRFDDDLVEG--VADKPSSEEEVGEGATDEQPQCRVKMPIHMAFTAAGIKLHPREVRPLL 625 +YK AARNL EYHGVPSMT L T+ LL+L P RL QGLAPK+LL E D + AD ++ + +T D +E VA + S + E G K PIH F AAG++L PRE RPLL Sbjct: 51 LYKAAARNLCEYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPKQLLEGKSAAGDAXXXXXXXXXXXXXXXXEVDPEQ-----ADNNQVSDDSNTNSRDGTDIEHDHVATQDSIDIETGAS----------KHPIHAVFVAAGVQLRPRETRPLL 191
BLAST of mRNA_F-serratus_M_contig1094.870.1 vs. uniprot
Match: A0A6H5JCG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG1_9PHAE) HSP 1 Score: 70.1 bits (170), Expect = 2.350e-9 Identity = 54/145 (37.24%), Postives = 73/145 (50.34%), Query Frame = 2 Query: 197 IYKVAARNLREYHGVPSMTPDKLTSTLDLLKLCPRRLTKQGLAPKKLLLEMMKDKRVPLADNETDEDLTETVCADMELMAVEDDTKRFDDDLVEGVAD--KPSSEEEVGEGATDEQPQCRVKMPIHMAFTAAGIKLHPREVRPLL 625 ++K AARNLREYHGVPS+TP L +T+ LL+L P RL QGLAPK LL ++ D T + E +F DL +D ++ V + + + + K PI F A G++L PRE RPLL Sbjct: 41 MFKAAARNLREYHGVPSITPGGLETTMVLLELRPARLVAQGLAPKILLK----------GNSTAGVDADSTDGSGGFEAEEEQANNQFSHDLSSNSSDGGDTGNDNIVTQNSIGFEARAS-KHPIQAVFVAVGVQLRPRETRPLL 174 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1094.870.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1094.870.1 >prot_F-serratus_M_contig1094.870.1 ID=prot_F-serratus_M_contig1094.870.1|Name=mRNA_F-serratus_M_contig1094.870.1|organism=Fucus serratus male|type=polypeptide|length=228bp MTPDKLTSTLDLLKLCPRRLTKQGLAPKKLLLEMMKDKRVPLADNETDEDback to top mRNA from alignment at F-serratus_M_contig1094:304165..306428- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1094.870.1 ID=mRNA_F-serratus_M_contig1094.870.1|Name=mRNA_F-serratus_M_contig1094.870.1|organism=Fucus serratus male|type=mRNA|length=2264bp|location=Sequence derived from alignment at F-serratus_M_contig1094:304165..306428- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1094:304165..306428- >mRNA_F-serratus_M_contig1094.870.1 ID=mRNA_F-serratus_M_contig1094.870.1|Name=mRNA_F-serratus_M_contig1094.870.1|organism=Fucus serratus male|type=CDS|length=1368bp|location=Sequence derived from alignment at F-serratus_M_contig1094:304165..306428- (Fucus serratus male)back to top |