prot_F-serratus_M_contig1094.870.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1094.870.1
Unique Nameprot_F-serratus_M_contig1094.870.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length228
Homology
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BLAST of mRNA_F-serratus_M_contig1094.870.1 vs. uniprot
Match: A0A6H5KB69_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB69_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 3.520e-25
Identity = 79/164 (48.17%), Postives = 90/164 (54.88%), Query Frame = 0 
Query:    1 MTPDKLTSTLDLLKLCPRRLTKQGLAPKKLLLEM-------MKDKRVPLADNETDEDLTETVCADMELMAVEDDTKRFDDDLVEGVAD----------KPSSEEEVGEGATDEQPQCRVKMPIHMAFTAAGIKLHPREVRPLLVALGVHPRHFVKLGLIDAKDL 147
            MT  KL  TL  LKL PRRL KQGLAPK LL  M       MK  +V L D E +EDL E+V A MELM+VEDD K  ++  V    D          K SS +   E   D+      K  IH AF A GI+L PREVRPLLVAL V P    KLGL++ K L
Sbjct:  124 MTAPKLIKTLAFLKLNPRRLVKQGLAPKNLLARMKAEAANNMKVSKVTLGDGENNEDLAESVAAGMELMSVEDDKKECNNGFVSAKPDASAAAVPITAKTSSPDNDNEEENDDAAPEVKKNLIHTAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVNGKYL 287
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1094.870.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KB69_9PHAE3.520e-2548.17PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1094contigF-serratus_M_contig1094:304536..305219 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1094.870.1mRNA_F-serratus_M_contig1094.870.1Fucus serratus malemRNAF-serratus_M_contig1094 304165..306428 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1094.870.1 ID=prot_F-serratus_M_contig1094.870.1|Name=mRNA_F-serratus_M_contig1094.870.1|organism=Fucus serratus male|type=polypeptide|length=228bp
MTPDKLTSTLDLLKLCPRRLTKQGLAPKKLLLEMMKDKRVPLADNETDED
LTETVCADMELMAVEDDTKRFDDDLVEGVADKPSSEEEVGEGATDEQPQC
RVKMPIHMAFTAAGIKLHPREVRPLLVALGVHPRHFVKLGLIDAKDLPRP
PHHGRGRHGGKPCGPMRRRMSFLHPRLVFPGPPPPLRWPLTMPFPWFVTG
LTLSNRTLSMGRDTCARAALNVVVARV*
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