mRNA_F-serratus_M_contig1065.656.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1065.656.1 vs. uniprot
Match: D7FM68_ECTSI (Procaryotic DNA polymerase I n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM68_ECTSI) HSP 1 Score: 542 bits (1397), Expect = 8.930e-184 Identity = 277/426 (65.02%), Postives = 330/426 (77.46%), Query Frame = 2 Query: 311 VAHRIYKIVGREFDVGKPSILSKVIFDDMKVTNPRE----------RTKSRSVSMASLSAILKTEDDPIKRELLQLVLDWLSAKAIEKRGGFIALGAKVADMPEWTSRVIPDHDDLPVDASALPVVLIDGHYIIFRSFYAMPTLTAPDGTPVGALVGFCNFLNKLVLRPWADGSYPHRRVVVAFDTGMDTFRHKLYPGYKADRAEAPEDLRPQFALIKRACEAYGLDVFESQGYEADDVIASLAFQAVTAGATNVTIVSADKDLSQLVTRRVNMFNYYTGEMLGPEEVLTKFLAPPGRLADLLAIAGDKADGIRGAEGYGPVTAAKVLARHANLEDALEEICSTMLKKKKDPALISDTREQVLLARRIVELCSTVPLKSRQGCKSLHTQAPYGLTPGDGASHLLDFMRCAGMPDLLRRTAQILGVN 1558 VA RI++I GREFD+GKPS+L+KV++D+M V NP+ R K RSVS+ +LSA+L+ E DP KREL++LVL WL AKA+ KRGGF+A G KV D+P W+SR+IPD D+LP D SA PVVL+DGHYI +RSF+ MP L+A DGTPVGALVGFCN +NKLV++PWA+G ++VVV FDTG D FRH L P YK R E PE LRPQFAL+++ACEAYGL+ E GYE DDVIASLA +AV GATNVTIVSADKDL+QLVTRRVNM N YTGE LGPEEVL KFLAPPGRLADLLAIAGDK+DGI GAEGYGPV AAKVLA+H LE A++EICST+ KK +DP L++ TREQVLLARR+VELC+TVPL R G KSL + + L A LL FMR M +L RT+++LGVN Sbjct: 60 VAERIHQIAGREFDIGKPSVLAKVLYDEMSVFNPQAGSKAALTAAGRPKPRSVSVKTLSAVLEAERDPAKRELIELVLRWLDAKAVAKRGGFVAAGEKVVDIPSWSSRLIPDDDELPADPSASPVVLVDGHYITYRSFHGMPHLSAADGTPVGALVGFCNTMNKLVVQPWAEGVERRQKVVVVFDTGDDNFRHDLSPSYKKHRTETPEALRPQFALVRKACEAYGLETIEGPGYEGDDVIASLALEAVIGGATNVTIVSADKDLAQLVTRRVNMLNVYTGERLGPEEVLAKFLAPPGRLADLLAIAGDKSDGIVGAEGYGPVKAAKVLAKHETLEAAVDEICSTISKKIEDPELVAKTREQVLLARRLVELCTTVPLDRRTGLKSLASVPTFHLEGEGAAERLLAFMRRFEMDELSLRTSRLLGVN 485
BLAST of mRNA_F-serratus_M_contig1065.656.1 vs. uniprot
Match: A0A258BBL5_9CAUL (DNA polymerase I (Fragment) n=1 Tax=Asticcacaulis sp. 32-58-5 TaxID=1970317 RepID=A0A258BBL5_9CAUL) HSP 1 Score: 188 bits (477), Expect = 1.100e-50 Identity = 114/253 (45.06%), Postives = 153/253 (60.47%), Query Frame = 2 Query: 653 VVLIDGHYIIFRSFYAMPTLTAP-DGTPVGALVGFCNFLNKLVLRPWADGSYPHRRVVVAFDTGMDTFRHKLYPGYKADRAEAPEDLRPQFALIKRACEAYGLDVFESQGYEADDVIASLAFQAVTAGATNVTIVSADKDLSQLVTRRVNMFNYYTGEMLGPEEVLTKFLAPPGRLADLLAIAGDKADGIRGAEGYGPVTAAKVLARHANLEDALEEICSTMLKKKKDPALISDTREQVLLARRIVELCSTVP 1408 +VL+DG IFR+++ +P LT DG PVGA+ GFCN L KL+ DG H V+ FD G TFR+ LY YKA R APEDL PQF LI+ A A+G+ E G+EADD+IA+ A AV +VTIVS+DKDL QLV RV M +G E+V KF PP + D A+ GD AD + GA G G TAA++LA + NL+ L+ + +K+ K +++ R+Q+LL+R +V+L VP Sbjct: 6 LVLVDGSGYIFRAYHGLPPLTRKSDGLPVGAVSGFCNMLYKLIKENRGDGGPSHLAVI--FDAGSKTFRNDLYEAYKAHRPPAPEDLIPQFPLIREATIAFGVPSVELPGFEADDLIATYARMAVEQD-FDVTIVSSDKDLMQLVNDRVTMMEPVKAVTIGREQVYEKFGVPPELVVDAQALIGDTADNVPGAPGIGVKTAAQLLAEYGNLDALLDR--AHEIKQPKRREALTEFRDQILLSRELVKLRDDVP 253
BLAST of mRNA_F-serratus_M_contig1065.656.1 vs. uniprot
Match: A0A1M7TYN0_9RHOB (DNA polymerase I n=4 Tax=Oceanicella actignis TaxID=1189325 RepID=A0A1M7TYN0_9RHOB) HSP 1 Score: 202 bits (513), Expect = 1.140e-50 Identity = 125/303 (41.25%), Postives = 173/303 (57.10%), Query Frame = 2 Query: 659 LIDGHYIIFRSFYAMPTLTA-PDGTPVGALVGFCNFLNKLVLRPWADGSY---PHRRVVVAFDTGMDTFRHKLYPGYKADRAEAPEDLRPQFALIKRACEAYGLDVFESQGYEADDVIASLAFQAVTAGATNVTIVSADKDLSQLVTRRVNMFNYYTGEMLGPEEVLTKFLAPPGRLADLLAIAGDKADGIRGAEGYGPVTAAKVLARHANLEDALEEICSTMLKKKKDPALISDTREQVLLARRIVELCSTVPLKSRQGCKSLHTQAPYGLTPGDGASHLLDFMRCAGMPDLLRRTAQILGV 1555 L+DG IFR+++A+P LT DG PVGA+ GFCN + K++ ADG P V FD TFR+ ++P YKA+R PEDL PQF L++ A AY L V E++G+EADD+IA+ A A AGA VTI+S+DKDL QLV RV + + +++GPEEV +F PP R+ D+ A+AGD D + GA G G TAAK++ + +LE+ L K++ L + E++ ++RR+VEL VP +L P L LDF+ LLRR A+ LGV Sbjct: 16 LVDGSGFIFRAYHALPPLTRRSDGLPVGAVAGFCNMIQKMIAERAADGDASGCPVTHAAVIFDHPGKTFRNDIFPEYKANRPPPPEDLVPQFPLVREAARAYNLPVIEAEGWEADDIIATYARLAREAGA-KVTIISSDKDLMQLVDERVRLVDGMKNQVIGPEEVEARFGVPPERVVDVQALAGDPVDNVPGAPGIGVKTAAKLIREYGDLENLLAHAQDIPQPKRRQTLL--ENAERIRMSRRLVELARDVPPPLPLEELALRKPDPQAL---------LDFLSRMEFRTLLRRAARTLGV 306
BLAST of mRNA_F-serratus_M_contig1065.656.1 vs. uniprot
Match: A0A839SWK2_9HYPH (DNA polymerase I n=1 Tax=Limibacillus halophilus TaxID=1579333 RepID=A0A839SWK2_9HYPH) HSP 1 Score: 201 bits (512), Expect = 1.490e-50 Identity = 112/265 (42.26%), Postives = 160/265 (60.38%), Query Frame = 2 Query: 659 LIDGHYIIFRSFYAMPTLTAPDGTPVGALVGFCNFLNKLVLRPWADGSYPHRRVVVAFDTGMDTFRHKLYPGYKADRAEAPEDLRPQFALIKRACEAYGLDVFESQGYEADDVIASLAFQAVTAGATNVTIVSADKDLSQLVTRRVNMFNYYTGEMLGPEEVLTKFLAPPGRLADLLAIAGDKADGIRGAEGYGPVTAAKVLARHANLEDALEEICSTMLKKKKDPALISDTREQVLLARRIVELCSTVPLKSRQGCKSLHTQAP 1453 L+DG+ +FR+F+AMP++T DGTP GA GFCN L KL+ AD ++V FD TFR+++YP YKA+R E PEDL PQF +++ A A+GL E GYEADD+IA++A QAV G VT+VS+DKDL QLV V+M + +GP+EVL KF P ++ D+ ++AGD D + G G G TAA+++ + +LE LE K+++ + EQ ++RR+VEL P++ G +LH P Sbjct: 14 LVDGYGYLFRAFFAMPSITRKDGTPTGAAYGFCNMLVKLLRESDADA------MLVTFDASGPTFRNEIYPKYKANRDETPEDLIPQFPMVREAAAAFGLQSLELTGYEADDIIATVARQAVERG-IQVTVVSSDKDLMQLVRPGVSMLDPMKNRPIGPDEVLEKFGVSPDKVVDVQSLAGDSTDNVPGVPGIGIKTAAQLIGEYGSLEALLERAAEIKQPKRRENLIAF--AEQARISRRLVELTDAAPVEVEWGRLALHEPDP 269
BLAST of mRNA_F-serratus_M_contig1065.656.1 vs. uniprot
Match: B8C0P9_THAPS (53EXOc domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0P9_THAPS) HSP 1 Score: 187 bits (474), Expect = 1.520e-50 Identity = 107/253 (42.29%), Postives = 158/253 (62.45%), Query Frame = 2 Query: 653 VVLIDGHYIIFRSFYAMPTLTAPDGTPVGALVGFCNFLNKLVLRPWADGSYPHRRVVVAFDTGMDTFRHKLYPGYKADRAEAPEDLRPQFALIKRACEAYGLDVFESQGYEADDVIASLAFQAVTAGATNVTIVSADKDLSQLVTRRVNMFNYYTGEMLGPEEVLTKFLAPPGRLADLLAIAGDKADGIRGAEGYGPVTAAKVLARHANLEDALEEICSTMLKKKKDPALISDTREQVLLARRIVELCSTVPL 1411 ++LID IFRS++A+P L DGTP GAL G C L L+L G P RVV+AFD FRH++YP YKA+R PEDL PQF L++ A EA+G+ E++GYEADDVIA+LA QA+ G +V I+S DKDL QL+T V+M + + + ++V+ K+ +L D+LA+AGD +D I G G GP AA ++ + +L + + + + +K+KK + + E+V+L R++V L T+P+ Sbjct: 1 LLLIDASAYIFRSYHAIPPLHRSDGTPTGALHGVCRMLQNLLLSRLLKGDRP--RVVLAFDFKGPNFRHEIYPEYKANRGPCPEDLVPQFELVREAAEAFGIVQVEAEGYEADDVIATLARQALEEG-VDVDILSGDKDLMQLITPPVHMIDSTHFDRVTHDDVVEKWNVDSAKLGDVLALAGDSSDNIPGVPGIGPKIAAMLINEYGSLSELISQ--AENIKQKKRRESLIENAEKVILFRQLVTLNETIPV 248
BLAST of mRNA_F-serratus_M_contig1065.656.1 vs. uniprot
Match: A0A1U7JIJ8_9HYPH (DNA polymerase I n=3 Tax=Pseudovibrio exalbescens TaxID=197461 RepID=A0A1U7JIJ8_9HYPH) HSP 1 Score: 199 bits (505), Expect = 1.440e-49 Identity = 122/321 (38.01%), Postives = 180/321 (56.07%), Query Frame = 2 Query: 608 IPDHDDLPVDASALPVVLIDGHYIIFRSFYAMPTLTA-PDGTPVGALVGFCNFLNKLVLR-PWADGSYPHRRVVVAFDTGMDTFRHKLYPGYKADRAEAPEDLRPQFALIKRACEAYGLDVFESQGYEADDVIASLAFQAVTAGATNVTIVSADKDLSQLVTRRVNMFNYYTGEMLGPEEVLTKFLAPPGRLADLLAIAGDKADGIRGAEGYGPVTAAKVLARHANLEDALEEICSTMLKKKKDPALISDTREQVLLARRIVELCSTVPLKSRQGCKSLHTQAPYGLTPGDGASHLLDFMRCAGMPDLLRRTAQILGVNKD 1564 +P+ P ++L+DG IFR+++A+P LT PDG PVGA+ GFCN L K++ + P + V FD DTFR+++YP YK R +APEDL PQF LI+ A A+G+ E QGYEADD+IA+ A QA GA VTIVS DKDL QLV R+ M + +++GPEEV KF P ++ ++ ++AGD D + G G G TAA ++ LE LE+ T+ +KK+ LI + +Q +++++V+L VP++ + DG S L F++ G L R+ A+I + + Sbjct: 5 MPNQSTAPALTPNDHLILVDGSTFIFRAYHALPPLTRKPDGLPVGAVSGFCNMLWKMIQQGPTKEPGDEATHFAVIFDKSGDTFRNEIYPDYKGHRPDAPEDLIPQFGLIREATRAFGVPALEQQGYEADDLIATYARQAAACGA-RVTIVSGDKDLMQLVNERIGMVDTMKNKLIGPEEVFEKFGVTPDKVVEVQSLAGDSVDNVPGVPGIGLKTAALLINEFGTLETLLEQ-ADTIKQKKRRENLI-EFADQARISKQLVQLKEDVPVEV--------PLEDLSIVDVDGPS-ALGFLKAMGFTTLTRKVAEITATDAE 313
BLAST of mRNA_F-serratus_M_contig1065.656.1 vs. uniprot
Match: A0A7Y8MJ97_9PROT (DNA polymerase I (Fragment) n=1 Tax=Hydrogenophilaceae bacterium TaxID=2723029 RepID=A0A7Y8MJ97_9PROT) HSP 1 Score: 186 bits (473), Expect = 1.480e-49 Identity = 113/251 (45.02%), Postives = 154/251 (61.35%), Query Frame = 2 Query: 659 LIDGHYIIFRSFYAMPTLT-APDGTPVGALVGFCNFLNKLVLRPWADGSYPHRRVVVAFDTGMDTFRHKLYPGYKADRAEAPEDLRPQFALIKRACEAYGLDVFESQGYEADDVIASLAFQAVTAGATNVTIVSADKDLSQLVTR-RVNMFNYYTGEMLGPEEVLTKFLAPPGRLADLLAIAGDKADGIRGAEGYGPVTAAKVLARHANLEDALEEICSTMLKKKKDPALISDTREQVLLARRIVELCSTV 1405 L+DG IFR+++A+P LT A DG PVGA+ GFCN L K + A H VV FD TFR +LYP YKA R APEDL PQF +I+ A A+G+ E GYEADD+IA+ A QA GAT V IVS+DKDL QLV R+ +F+ + LGPE V+ KF P ++ D+ A+ GD D I GA G GP TAA+++ ++ +LE L + ++ +K+ K + +Q+ L++ +V LC TV Sbjct: 22 LVDGSGYIFRAYHALPPLTRASDGAPVGAVAGFCNMLFKFLEDMKAADKPTHLAVV--FDKSEKTFRSELYPQYKAQRPPAPEDLAPQFPMIREATRAFGVPAIEIDGYEADDIIATYARQAAREGAT-VKIVSSDKDLMQLVDDGRIELFDPMKQKPLGPEAVMEKFGVTPDKVIDVQALMGDSVDNIPGAPGIGPKTAAELINQYGDLETLLAK--ASEIKQPKRRETLIQHADQIRLSKDLVTLCDTV 267
BLAST of mRNA_F-serratus_M_contig1065.656.1 vs. uniprot
Match: A0A1H8LJ91_9RHOB (DNA polymerase I n=2 Tax=Paracoccus TaxID=265 RepID=A0A1H8LJ91_9RHOB) HSP 1 Score: 197 bits (502), Expect = 2.770e-49 Identity = 115/253 (45.45%), Postives = 159/253 (62.85%), Query Frame = 2 Query: 659 LIDGHYIIFRSFYAMPTLTAP-DGTPVGALVGFCNFLNKLVLRPWADGSYPHRRVVVAFDTGMDTFRHKLYPGYKADRAEAPEDLRPQFALIKRACEAYGLDVFESQGYEADDVIASLAFQAVTAGATNVTIVSADKDLSQLVTRRVNMFNYYTGEMLGPEEVLTKFLAPPGRLADLLAIAGDKADGIRGAEGYGPVTAAKVLARHANLEDALEEICSTMLKKKKDPALISDTREQVLLARRIVELCSTVPLK 1414 LIDG IFR+++A+P LT DG PVGA+ GFCN L K V + H V+ FD TFR+++YP YKA+R E PEDLRPQF L + A A+ + E++GYEADD+IA+LA QA AG + VTIVS+DKDL QLV V M + G+++GPEEV KF P R+ D+ A+AGD D + GA G G TAA+++ + +LE LE ++ +K+ K + D EQ+ +++R+V L PL+ Sbjct: 14 LIDGSAFIFRAYHALPPLTRKSDGLPVGAVAGFCNMLWKYVTDEHGSDAPTHAAVI--FDHSSKTFRNEIYPAYKANRPEPPEDLRPQFPLTRDATRAFNVSCIETEGYEADDIIAALACQARDAGGS-VTIVSSDKDLMQLVGDGVRMLDPIKGKLIGPEEVAEKFGVGPDRVIDVQALAGDSVDNVPGAPGIGIKTAAQLINEYGDLETLLER--ASEIKQPKRRQTLIDHAEQIRISKRLVTLDCDTPLE 261
BLAST of mRNA_F-serratus_M_contig1065.656.1 vs. uniprot
Match: A0A1Y5RJI8_9PROT (DNA polymerase I n=1 Tax=Oceanibacterium hippocampi TaxID=745714 RepID=A0A1Y5RJI8_9PROT) HSP 1 Score: 197 bits (500), Expect = 5.540e-49 Identity = 113/263 (42.97%), Postives = 159/263 (60.46%), Query Frame = 2 Query: 626 LPVDASALPVVLIDGHYIIFRSFYAMPTLTAPDGTPVGALVGFCNFLNKLVLRPWADGSYPHRRVVVAFDTGMDTFRHKLYPGYKADRAEAPEDLRPQFALIKRACEAYGLDVFESQGYEADDVIASLAFQAVTAGATNVTIVSADKDLSQLVTRRVNMFNYYTGEMLGPEEVLTKFLAPPGRLADLLAIAGDKADGIRGAEGYGPVTAAKVLARHANLEDALEEICSTMLKKKKDPALISDTREQVLLARRIVELCSTVPLK 1414 + DA+ + L+DG IFR++YA+P LT PDGTPVGA++GFCN L KL+ DGS H VV FD+ TFR+ +YP YKA+R APEDL PQF+LI+ A A+ + E +GYEADD+IA+ +A T GA V IVS+DKDL QLV V M + ++ EVL KF P R+ D+ ++AGD D + G G G TAA+++ + +LE L K+++ + EQ ++R++V L + VPL+ Sbjct: 2 IATDAARHRIYLVDGSGYIFRAYYALPPLTRPDGTPVGAVLGFCNMLQKLIDDTKVDGSVSHLAVV--FDSARKTFRNDIYPEYKANREAAPEDLVPQFSLIRDATRAFSVHSIEREGYEADDIIATFVARARTIGA-EVVIVSSDKDLMQLVGDGVTMLDPMKNRIVDLPEVLEKFGVAPDRVVDVQSLAGDSTDNVPGVPGIGIKTAAQLINEYGDLESLLARAAEIKQPKRRENLIAF--AEQARISRQLVALAADVPLE 259
BLAST of mRNA_F-serratus_M_contig1065.656.1 vs. uniprot
Match: A0A7V7PTC5_9HYPH (DNA polymerase I n=1 Tax=Aureimonas leprariae TaxID=2615207 RepID=A0A7V7PTC5_9HYPH) HSP 1 Score: 197 bits (500), Expect = 6.090e-49 Identity = 135/327 (41.28%), Postives = 187/327 (57.19%), Query Frame = 2 Query: 659 LIDGHYIIFRSFYAMPTLTAP-DGTPVGALVGFCNFLNKLV--LRPWADGSYPHRRVVVAFDTGMDTFRHKLYPGYKADRAEAPEDLRPQFALIKRACEAYGLDVFESQGYEADDVIASLAFQAVTAGATNVTIVSADKDLSQLVTRRVNMFNYYTGEMLGPEEVLTKFLAPPGRLADLLAIAGDKADGIRGAEGYGPVTAAKVLARHANLEDALEEICSTMLKKKKDPALISDTREQVLLARRIVELCSTVPLKSRQGCKSLHTQAPYGLTPGDGASHLLDFMRCAGMPDLLRRTAQILGVNKDGSQIL*VKIESSEISMFDGKLE 1630 L+DG IFR+++A+P LT DG PVGA+ GFCN L KLV R A G+ P V+ FD TFR++LY YKA+RAE PEDLRPQFALI+ A A+ L E QG+EADD+IA+ QAV AG +VTIVS+DKDL QLV V +++ + LGPE+V KF P ++ DL A+ GD +D + G G GP TAA++L + LE LE + +K+ K + EQ L++R+V L +PL LH DG L+ +++ L RR + LG + GS +E+++I + DG++ Sbjct: 9 LVDGSAYIFRAYHALPPLTRKSDGLPVGAVAGFCNMLWKLVEESRDTAVGTVPTHFAVI-FDHSSTTFRNELYEHYKANRAEPPEDLRPQFALIREAVRAFDLPCIEQQGFEADDLIATYTRQAVEAGG-DVTIVSSDKDLMQLVGPGVILYDQMKDKRLGPEDVREKFGVLPEKMIDLQALVGDTSDNVPGVPGIGPKTAAELLETYGTLEALLER--AGEIKQAKRRENLQAFAEQARLSKRLVTLEQDMPLDVPLADLKLHEP--------DGEK-LIAYLKAMEFTTLTRRVSAALGTDA-GS------VETAKIEVTDGEVR 315 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1065.656.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1065.656.1 >prot_F-serratus_M_contig1065.656.1 ID=prot_F-serratus_M_contig1065.656.1|Name=mRNA_F-serratus_M_contig1065.656.1|organism=Fucus serratus male|type=polypeptide|length=505bp MKSPIILARTAIVVYNSSRFVTPLAFGVRCCSLDLKTAVRSTWTHRTVGTback to top mRNA from alignment at F-serratus_M_contig1065:197738..205614+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1065.656.1 ID=mRNA_F-serratus_M_contig1065.656.1|Name=mRNA_F-serratus_M_contig1065.656.1|organism=Fucus serratus male|type=mRNA|length=7877bp|location=Sequence derived from alignment at F-serratus_M_contig1065:197738..205614+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1065:197738..205614+ >mRNA_F-serratus_M_contig1065.656.1 ID=mRNA_F-serratus_M_contig1065.656.1|Name=mRNA_F-serratus_M_contig1065.656.1|organism=Fucus serratus male|type=CDS|length=3030bp|location=Sequence derived from alignment at F-serratus_M_contig1065:197738..205614+ (Fucus serratus male)back to top |