prot_F-serratus_M_contig1065.656.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1065.656.1
Unique Nameprot_F-serratus_M_contig1065.656.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length505
Homology
BLAST of mRNA_F-serratus_M_contig1065.656.1 vs. uniprot
Match: D7FM68_ECTSI (Procaryotic DNA polymerase I n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM68_ECTSI)

HSP 1 Score: 542 bits (1397), Expect = 1.070e-187
Identity = 277/426 (65.02%), Postives = 330/426 (77.46%), Query Frame = 0
Query:   82 VAHRIYKIVGREFDVGKPSILSKVIFDDMKVTNPRE----------RTKSRSVSMASLSAILKTEDDPIKRELLQLVLDWLSAKAIEKRGGFIALGAKVADMPEWTSRVIPDHDDLPVDASALPVVLIDGHYIIFRSFYAMPTLTAPDGTPVGALVGFCNFLNKLVLRPWADGSYPHRRVVVAFDTGMDTFRHKLYPGYKADRAEAPEDLRPQFALIKRACEAYGLDVFESQGYEADDVIASLAFQAVTAGATNVTIVSADKDLSQLVTRRVNMFNYYTGEMLGPEEVLTKFLAPPGRLADLLAIAGDKADGIRGAEGYGPVTAAKVLARHANLEDALEEICSTMLKKKKDPALISDTREQVLLARRIVELCSTVPLKSRQGCKSLHTQAPYGLTPGDGASHLLDFMRCAGMPDLLRRTAQILGVN 497
            VA RI++I GREFD+GKPS+L+KV++D+M V NP+           R K RSVS+ +LSA+L+ E DP KREL++LVL WL AKA+ KRGGF+A G KV D+P W+SR+IPD D+LP D SA PVVL+DGHYI +RSF+ MP L+A DGTPVGALVGFCN +NKLV++PWA+G    ++VVV FDTG D FRH L P YK  R E PE LRPQFAL+++ACEAYGL+  E  GYE DDVIASLA +AV  GATNVTIVSADKDL+QLVTRRVNM N YTGE LGPEEVL KFLAPPGRLADLLAIAGDK+DGI GAEGYGPV AAKVLA+H  LE A++EICST+ KK +DP L++ TREQVLLARR+VELC+TVPL  R G KSL +   + L     A  LL FMR   M +L  RT+++LGVN
Sbjct:   60 VAERIHQIAGREFDIGKPSVLAKVLYDEMSVFNPQAGSKAALTAAGRPKPRSVSVKTLSAVLEAERDPAKRELIELVLRWLDAKAVAKRGGFVAAGEKVVDIPSWSSRLIPDDDELPADPSASPVVLVDGHYITYRSFHGMPHLSAADGTPVGALVGFCNTMNKLVVQPWAEGVERRQKVVVVFDTGDDNFRHDLSPSYKKHRTETPEALRPQFALVRKACEAYGLETIEGPGYEGDDVIASLALEAVIGGATNVTIVSADKDLAQLVTRRVNMLNVYTGERLGPEEVLAKFLAPPGRLADLLAIAGDKSDGIVGAEGYGPVKAAKVLAKHETLEAAVDEICSTISKKIEDPELVAKTREQVLLARRLVELCTTVPLDRRTGLKSLASVPTFHLEGEGAAERLLAFMRRFEMDELSLRTSRLLGVN 485          
BLAST of mRNA_F-serratus_M_contig1065.656.1 vs. uniprot
Match: A0A1M7TYN0_9RHOB (DNA polymerase I n=4 Tax=Oceanicella actignis TaxID=1189325 RepID=A0A1M7TYN0_9RHOB)

HSP 1 Score: 202 bits (513), Expect = 1.050e-52
Identity = 125/303 (41.25%), Postives = 173/303 (57.10%), Query Frame = 0
Query:  198 LIDGHYIIFRSFYAMPTLTA-PDGTPVGALVGFCNFLNKLVLRPWADGSY---PHRRVVVAFDTGMDTFRHKLYPGYKADRAEAPEDLRPQFALIKRACEAYGLDVFESQGYEADDVIASLAFQAVTAGATNVTIVSADKDLSQLVTRRVNMFNYYTGEMLGPEEVLTKFLAPPGRLADLLAIAGDKADGIRGAEGYGPVTAAKVLARHANLEDALEEICSTMLKKKKDPALISDTREQVLLARRIVELCSTVPLKSRQGCKSLHTQAPYGLTPGDGASHLLDFMRCAGMPDLLRRTAQILGV 496
            L+DG   IFR+++A+P LT   DG PVGA+ GFCN + K++    ADG     P     V FD    TFR+ ++P YKA+R   PEDL PQF L++ A  AY L V E++G+EADD+IA+ A  A  AGA  VTI+S+DKDL QLV  RV + +    +++GPEEV  +F  PP R+ D+ A+AGD  D + GA G G  TAAK++  + +LE+ L         K++   L  +  E++ ++RR+VEL   VP        +L    P  L         LDF+       LLRR A+ LGV
Sbjct:   16 LVDGSGFIFRAYHALPPLTRRSDGLPVGAVAGFCNMIQKMIAERAADGDASGCPVTHAAVIFDHPGKTFRNDIFPEYKANRPPPPEDLVPQFPLVREAARAYNLPVIEAEGWEADDIIATYARLAREAGA-KVTIISSDKDLMQLVDERVRLVDGMKNQVIGPEEVEARFGVPPERVVDVQALAGDPVDNVPGAPGIGVKTAAKLIREYGDLENLLAHAQDIPQPKRRQTLL--ENAERIRMSRRLVELARDVPPPLPLEELALRKPDPQAL---------LDFLSRMEFRTLLRRAARTLGV 306          
BLAST of mRNA_F-serratus_M_contig1065.656.1 vs. uniprot
Match: A0A839SWK2_9HYPH (DNA polymerase I n=1 Tax=Limibacillus halophilus TaxID=1579333 RepID=A0A839SWK2_9HYPH)

HSP 1 Score: 201 bits (512), Expect = 1.400e-52
Identity = 112/265 (42.26%), Postives = 160/265 (60.38%), Query Frame = 0
Query:  198 LIDGHYIIFRSFYAMPTLTAPDGTPVGALVGFCNFLNKLVLRPWADGSYPHRRVVVAFDTGMDTFRHKLYPGYKADRAEAPEDLRPQFALIKRACEAYGLDVFESQGYEADDVIASLAFQAVTAGATNVTIVSADKDLSQLVTRRVNMFNYYTGEMLGPEEVLTKFLAPPGRLADLLAIAGDKADGIRGAEGYGPVTAAKVLARHANLEDALEEICSTMLKKKKDPALISDTREQVLLARRIVELCSTVPLKSRQGCKSLHTQAP 462
            L+DG+  +FR+F+AMP++T  DGTP GA  GFCN L KL+    AD       ++V FD    TFR+++YP YKA+R E PEDL PQF +++ A  A+GL   E  GYEADD+IA++A QAV  G   VT+VS+DKDL QLV   V+M +      +GP+EVL KF   P ++ D+ ++AGD  D + G  G G  TAA+++  + +LE  LE        K+++  +     EQ  ++RR+VEL    P++   G  +LH   P
Sbjct:   14 LVDGYGYLFRAFFAMPSITRKDGTPTGAAYGFCNMLVKLLRESDADA------MLVTFDASGPTFRNEIYPKYKANRDETPEDLIPQFPMVREAAAAFGLQSLELTGYEADDIIATVARQAVERG-IQVTVVSSDKDLMQLVRPGVSMLDPMKNRPIGPDEVLEKFGVSPDKVVDVQSLAGDSTDNVPGVPGIGIKTAAQLIGEYGSLEALLERAAEIKQPKRRENLIAF--AEQARISRRLVELTDAAPVEVEWGRLALHEPDP 269          
BLAST of mRNA_F-serratus_M_contig1065.656.1 vs. uniprot
Match: A0A258BBL5_9CAUL (DNA polymerase I (Fragment) n=1 Tax=Asticcacaulis sp. 32-58-5 TaxID=1970317 RepID=A0A258BBL5_9CAUL)

HSP 1 Score: 188 bits (477), Expect = 1.800e-52
Identity = 114/253 (45.06%), Postives = 153/253 (60.47%), Query Frame = 0
Query:  196 VVLIDGHYIIFRSFYAMPTLTAP-DGTPVGALVGFCNFLNKLVLRPWADGSYPHRRVVVAFDTGMDTFRHKLYPGYKADRAEAPEDLRPQFALIKRACEAYGLDVFESQGYEADDVIASLAFQAVTAGATNVTIVSADKDLSQLVTRRVNMFNYYTGEMLGPEEVLTKFLAPPGRLADLLAIAGDKADGIRGAEGYGPVTAAKVLARHANLEDALEEICSTMLKKKKDPALISDTREQVLLARRIVELCSTVP 447
            +VL+DG   IFR+++ +P LT   DG PVGA+ GFCN L KL+     DG   H  V+  FD G  TFR+ LY  YKA R  APEDL PQF LI+ A  A+G+   E  G+EADD+IA+ A  AV     +VTIVS+DKDL QLV  RV M        +G E+V  KF  PP  + D  A+ GD AD + GA G G  TAA++LA + NL+  L+   +  +K+ K    +++ R+Q+LL+R +V+L   VP
Sbjct:    6 LVLVDGSGYIFRAYHGLPPLTRKSDGLPVGAVSGFCNMLYKLIKENRGDGGPSHLAVI--FDAGSKTFRNDLYEAYKAHRPPAPEDLIPQFPLIREATIAFGVPSVELPGFEADDLIATYARMAVEQD-FDVTIVSSDKDLMQLVNDRVTMMEPVKAVTIGREQVYEKFGVPPELVVDAQALIGDTADNVPGAPGIGVKTAAQLLAEYGNLDALLDR--AHEIKQPKRREALTEFRDQILLSRELVKLRDDVP 253          
BLAST of mRNA_F-serratus_M_contig1065.656.1 vs. uniprot
Match: B8C0P9_THAPS (53EXOc domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0P9_THAPS)

HSP 1 Score: 187 bits (474), Expect = 2.580e-52
Identity = 107/253 (42.29%), Postives = 158/253 (62.45%), Query Frame = 0
Query:  196 VVLIDGHYIIFRSFYAMPTLTAPDGTPVGALVGFCNFLNKLVLRPWADGSYPHRRVVVAFDTGMDTFRHKLYPGYKADRAEAPEDLRPQFALIKRACEAYGLDVFESQGYEADDVIASLAFQAVTAGATNVTIVSADKDLSQLVTRRVNMFNYYTGEMLGPEEVLTKFLAPPGRLADLLAIAGDKADGIRGAEGYGPVTAAKVLARHANLEDALEEICSTMLKKKKDPALISDTREQVLLARRIVELCSTVPL 448
            ++LID    IFRS++A+P L   DGTP GAL G C  L  L+L     G  P  RVV+AFD     FRH++YP YKA+R   PEDL PQF L++ A EA+G+   E++GYEADDVIA+LA QA+  G  +V I+S DKDL QL+T  V+M +    + +  ++V+ K+     +L D+LA+AGD +D I G  G GP  AA ++  + +L + + +  +  +K+KK    + +  E+V+L R++V L  T+P+
Sbjct:    1 LLLIDASAYIFRSYHAIPPLHRSDGTPTGALHGVCRMLQNLLLSRLLKGDRP--RVVLAFDFKGPNFRHEIYPEYKANRGPCPEDLVPQFELVREAAEAFGIVQVEAEGYEADDVIATLARQALEEG-VDVDILSGDKDLMQLITPPVHMIDSTHFDRVTHDDVVEKWNVDSAKLGDVLALAGDSSDNIPGVPGIGPKIAAMLINEYGSLSELISQ--AENIKQKKRRESLIENAEKVILFRQLVTLNETIPV 248          
BLAST of mRNA_F-serratus_M_contig1065.656.1 vs. uniprot
Match: A0A1U7JIJ8_9HYPH (DNA polymerase I n=3 Tax=Pseudovibrio exalbescens TaxID=197461 RepID=A0A1U7JIJ8_9HYPH)

HSP 1 Score: 199 bits (505), Expect = 1.450e-51
Identity = 122/321 (38.01%), Postives = 180/321 (56.07%), Query Frame = 0
Query:  181 IPDHDDLPVDASALPVVLIDGHYIIFRSFYAMPTLTA-PDGTPVGALVGFCNFLNKLVLR-PWADGSYPHRRVVVAFDTGMDTFRHKLYPGYKADRAEAPEDLRPQFALIKRACEAYGLDVFESQGYEADDVIASLAFQAVTAGATNVTIVSADKDLSQLVTRRVNMFNYYTGEMLGPEEVLTKFLAPPGRLADLLAIAGDKADGIRGAEGYGPVTAAKVLARHANLEDALEEICSTMLKKKKDPALISDTREQVLLARRIVELCSTVPLKSRQGCKSLHTQAPYGLTPGDGASHLLDFMRCAGMPDLLRRTAQILGVNKD 499
            +P+    P       ++L+DG   IFR+++A+P LT  PDG PVGA+ GFCN L K++ + P  +         V FD   DTFR+++YP YK  R +APEDL PQF LI+ A  A+G+   E QGYEADD+IA+ A QA   GA  VTIVS DKDL QLV  R+ M +    +++GPEEV  KF   P ++ ++ ++AGD  D + G  G G  TAA ++     LE  LE+   T+ +KK+   LI +  +Q  +++++V+L   VP++               +   DG S  L F++  G   L R+ A+I   + +
Sbjct:    5 MPNQSTAPALTPNDHLILVDGSTFIFRAYHALPPLTRKPDGLPVGAVSGFCNMLWKMIQQGPTKEPGDEATHFAVIFDKSGDTFRNEIYPDYKGHRPDAPEDLIPQFGLIREATRAFGVPALEQQGYEADDLIATYARQAAACGA-RVTIVSGDKDLMQLVNERIGMVDTMKNKLIGPEEVFEKFGVTPDKVVEVQSLAGDSVDNVPGVPGIGLKTAALLINEFGTLETLLEQ-ADTIKQKKRRENLI-EFADQARISKQLVQLKEDVPVEV--------PLEDLSIVDVDGPS-ALGFLKAMGFTTLTRKVAEITATDAE 313          
BLAST of mRNA_F-serratus_M_contig1065.656.1 vs. uniprot
Match: A0A7Y8MJ97_9PROT (DNA polymerase I (Fragment) n=1 Tax=Hydrogenophilaceae bacterium TaxID=2723029 RepID=A0A7Y8MJ97_9PROT)

HSP 1 Score: 186 bits (473), Expect = 2.550e-51
Identity = 113/251 (45.02%), Postives = 154/251 (61.35%), Query Frame = 0
Query:  198 LIDGHYIIFRSFYAMPTLT-APDGTPVGALVGFCNFLNKLVLRPWADGSYPHRRVVVAFDTGMDTFRHKLYPGYKADRAEAPEDLRPQFALIKRACEAYGLDVFESQGYEADDVIASLAFQAVTAGATNVTIVSADKDLSQLVTR-RVNMFNYYTGEMLGPEEVLTKFLAPPGRLADLLAIAGDKADGIRGAEGYGPVTAAKVLARHANLEDALEEICSTMLKKKKDPALISDTREQVLLARRIVELCSTV 446
            L+DG   IFR+++A+P LT A DG PVGA+ GFCN L K +    A     H  VV  FD    TFR +LYP YKA R  APEDL PQF +I+ A  A+G+   E  GYEADD+IA+ A QA   GAT V IVS+DKDL QLV   R+ +F+    + LGPE V+ KF   P ++ D+ A+ GD  D I GA G GP TAA+++ ++ +LE  L +  ++ +K+ K    +    +Q+ L++ +V LC TV
Sbjct:   22 LVDGSGYIFRAYHALPPLTRASDGAPVGAVAGFCNMLFKFLEDMKAADKPTHLAVV--FDKSEKTFRSELYPQYKAQRPPAPEDLAPQFPMIREATRAFGVPAIEIDGYEADDIIATYARQAAREGAT-VKIVSSDKDLMQLVDDGRIELFDPMKQKPLGPEAVMEKFGVTPDKVIDVQALMGDSVDNIPGAPGIGPKTAAELINQYGDLETLLAK--ASEIKQPKRRETLIQHADQIRLSKDLVTLCDTV 267          
BLAST of mRNA_F-serratus_M_contig1065.656.1 vs. uniprot
Match: A0A1H8LJ91_9RHOB (DNA polymerase I n=2 Tax=Paracoccus TaxID=265 RepID=A0A1H8LJ91_9RHOB)

HSP 1 Score: 197 bits (502), Expect = 2.940e-51
Identity = 115/253 (45.45%), Postives = 159/253 (62.85%), Query Frame = 0
Query:  198 LIDGHYIIFRSFYAMPTLTAP-DGTPVGALVGFCNFLNKLVLRPWADGSYPHRRVVVAFDTGMDTFRHKLYPGYKADRAEAPEDLRPQFALIKRACEAYGLDVFESQGYEADDVIASLAFQAVTAGATNVTIVSADKDLSQLVTRRVNMFNYYTGEMLGPEEVLTKFLAPPGRLADLLAIAGDKADGIRGAEGYGPVTAAKVLARHANLEDALEEICSTMLKKKKDPALISDTREQVLLARRIVELCSTVPLK 449
            LIDG   IFR+++A+P LT   DG PVGA+ GFCN L K V       +  H  V+  FD    TFR+++YP YKA+R E PEDLRPQF L + A  A+ +   E++GYEADD+IA+LA QA  AG + VTIVS+DKDL QLV   V M +   G+++GPEEV  KF   P R+ D+ A+AGD  D + GA G G  TAA+++  + +LE  LE   ++ +K+ K    + D  EQ+ +++R+V L    PL+
Sbjct:   14 LIDGSAFIFRAYHALPPLTRKSDGLPVGAVAGFCNMLWKYVTDEHGSDAPTHAAVI--FDHSSKTFRNEIYPAYKANRPEPPEDLRPQFPLTRDATRAFNVSCIETEGYEADDIIAALACQARDAGGS-VTIVSSDKDLMQLVGDGVRMLDPIKGKLIGPEEVAEKFGVGPDRVIDVQALAGDSVDNVPGAPGIGIKTAAQLINEYGDLETLLER--ASEIKQPKRRQTLIDHAEQIRISKRLVTLDCDTPLE 261          
BLAST of mRNA_F-serratus_M_contig1065.656.1 vs. uniprot
Match: A0A1Y5RJI8_9PROT (DNA polymerase I n=1 Tax=Oceanibacterium hippocampi TaxID=745714 RepID=A0A1Y5RJI8_9PROT)

HSP 1 Score: 197 bits (500), Expect = 5.970e-51
Identity = 113/263 (42.97%), Postives = 159/263 (60.46%), Query Frame = 0
Query:  187 LPVDASALPVVLIDGHYIIFRSFYAMPTLTAPDGTPVGALVGFCNFLNKLVLRPWADGSYPHRRVVVAFDTGMDTFRHKLYPGYKADRAEAPEDLRPQFALIKRACEAYGLDVFESQGYEADDVIASLAFQAVTAGATNVTIVSADKDLSQLVTRRVNMFNYYTGEMLGPEEVLTKFLAPPGRLADLLAIAGDKADGIRGAEGYGPVTAAKVLARHANLEDALEEICSTMLKKKKDPALISDTREQVLLARRIVELCSTVPLK 449
            +  DA+   + L+DG   IFR++YA+P LT PDGTPVGA++GFCN L KL+     DGS  H  VV  FD+   TFR+ +YP YKA+R  APEDL PQF+LI+ A  A+ +   E +GYEADD+IA+   +A T GA  V IVS+DKDL QLV   V M +     ++   EVL KF   P R+ D+ ++AGD  D + G  G G  TAA+++  + +LE  L         K+++  +     EQ  ++R++V L + VPL+
Sbjct:    2 IATDAARHRIYLVDGSGYIFRAYYALPPLTRPDGTPVGAVLGFCNMLQKLIDDTKVDGSVSHLAVV--FDSARKTFRNDIYPEYKANREAAPEDLVPQFSLIRDATRAFSVHSIEREGYEADDIIATFVARARTIGA-EVVIVSSDKDLMQLVGDGVTMLDPMKNRIVDLPEVLEKFGVAPDRVVDVQSLAGDSTDNVPGVPGIGIKTAAQLINEYGDLESLLARAAEIKQPKRRENLIAF--AEQARISRQLVALAADVPLE 259          
BLAST of mRNA_F-serratus_M_contig1065.656.1 vs. uniprot
Match: UPI00036D90DD (DNA polymerase I n=1 Tax=Woodsholea maritima TaxID=240237 RepID=UPI00036D90DD)

HSP 1 Score: 196 bits (499), Expect = 7.110e-51
Identity = 121/300 (40.33%), Postives = 172/300 (57.33%), Query Frame = 0
Query:  196 VVLIDGHYIIFRSFYAMPTLTAPDGTPVGALVGFCNFLNKLVLRPWADGSYPHRRVVVAFDTGMDTFRHKLYPGYKADRAEAPEDLRPQFALIKRACEAYGLDVFESQGYEADDVIASLAFQAVTAGATNVTIVSADKDLSQLVTRRVNMFNYYTGEMLGPEEVLTKFLAPPGRLADLLAIAGDKADGIRGAEGYGPVTAAKVLARHANLEDALEEICSTMLKKKKDPALISDTREQVLLARRIVELCSTVPLKSRQGCKSLHTQAPYGLTPGDGASHLLDFMRCAGMPDLLRRTAQILG 495
            V L+DG   IFR+++A+P LT  DGTPVGA+ GFCN L KL+      G+     + V FD   DTFR+++YP YKA+R  APEDL PQFALI+ A  A+ L   E +GYEADD+IA+ A QA   GA  VTIVS+DKDL QLV  R+ + +    +  GP+EV  KF   P R+ D+ ++AGD  D + G  G G  TAA+++  + +LE  L  +      K+++  +  +  E   ++R++V L   VPL   +G ++     P+         +LL FM+      L RR   +LG
Sbjct:   13 VYLVDGSGYIFRAYHALPPLTRSDGTPVGAVQGFCNMLWKLLED--LKGADEPSHLAVIFDAKGDTFRNEIYPAYKANRPPAPEDLVPQFALIREATRAFDLPCIELEGYEADDIIATYACQARAQGA-RVTIVSSDKDLMQLVDDRITLLDTMKNKRSGPDEVREKFGVGPNRVIDVQSLAGDSVDNVPGVPGIGIKTAAQLIETYGDLEGLLSHLDEIKQPKRREKLM--EHAEDARVSRQLVTLKQDVPLS--EGLEAFGAADPH-------PDNLLPFMKAMEFRTLTRRVQDMLG 298          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1065.656.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM68_ECTSI1.070e-18765.02Procaryotic DNA polymerase I n=1 Tax=Ectocarpus si... [more]
A0A1M7TYN0_9RHOB1.050e-5241.25DNA polymerase I n=4 Tax=Oceanicella actignis TaxI... [more]
A0A839SWK2_9HYPH1.400e-5242.26DNA polymerase I n=1 Tax=Limibacillus halophilus T... [more]
A0A258BBL5_9CAUL1.800e-5245.06DNA polymerase I (Fragment) n=1 Tax=Asticcacaulis ... [more]
B8C0P9_THAPS2.580e-5242.2953EXOc domain-containing protein (Fragment) n=1 Ta... [more]
A0A1U7JIJ8_9HYPH1.450e-5138.01DNA polymerase I n=3 Tax=Pseudovibrio exalbescens ... [more]
A0A7Y8MJ97_9PROT2.550e-5145.02DNA polymerase I (Fragment) n=1 Tax=Hydrogenophila... [more]
A0A1H8LJ91_9RHOB2.940e-5145.45DNA polymerase I n=2 Tax=Paracoccus TaxID=265 RepI... [more]
A0A1Y5RJI8_9PROT5.970e-5142.97DNA polymerase I n=1 Tax=Oceanibacterium hippocamp... [more]
UPI00036D90DD7.110e-5140.33DNA polymerase I n=1 Tax=Woodsholea maritima TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0024215'-3' exonuclease, N-terminalSMARTSM0047553exo3coord: 194..460
e-value: 5.3E-66
score: 235.3
IPR008918Helix-hairpin-helix motif, class 2SMARTSM00279HhH_4coord: 367..402
e-value: 0.001
score: 28.3
NoneNo IPR availableGENE3D3.40.50.1010coord: 196..451
e-value: 3.4E-69
score: 235.0
NoneNo IPR availableGENE3D1.10.150.20coord: 368..443
e-value: 3.4E-69
score: 235.0
IPR020045DNA polymerase I-like, H3TH domainPFAMPF013675_3_exonuccoord: 366..450
e-value: 9.0E-14
score: 51.9
IPR0200465'-3' exonuclease, alpha-helical arch, N-terminalPFAMPF027395_3_exonuc_Ncoord: 196..363
e-value: 4.6E-48
score: 163.1
IPR038969Flap endonucleasePANTHERPTHR42646FAMILY NOT NAMEDcoord: 194..488
IPR0362795'-3' exonuclease, C-terminal domain superfamilySUPERFAMILY478075' to 3' exonuclease, C-terminal subdomaincoord: 366..449
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 195..363

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1065contigF-serratus_M_contig1065:197805..204870 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1065.656.1mRNA_F-serratus_M_contig1065.656.1Fucus serratus malemRNAF-serratus_M_contig1065 197738..205614 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1065.656.1 ID=prot_F-serratus_M_contig1065.656.1|Name=mRNA_F-serratus_M_contig1065.656.1|organism=Fucus serratus male|type=polypeptide|length=505bp
MKSPIILARTAIVVYNSSRFVTPLAFGVRCCSLDLKTAVRSTWTHRTVGT
RTGKEGLVSVSHSFATDSTSASTPPGAVSKDVAHRIYKIVGREFDVGKPS
ILSKVIFDDMKVTNPRERTKSRSVSMASLSAILKTEDDPIKRELLQLVLD
WLSAKAIEKRGGFIALGAKVADMPEWTSRVIPDHDDLPVDASALPVVLID
GHYIIFRSFYAMPTLTAPDGTPVGALVGFCNFLNKLVLRPWADGSYPHRR
VVVAFDTGMDTFRHKLYPGYKADRAEAPEDLRPQFALIKRACEAYGLDVF
ESQGYEADDVIASLAFQAVTAGATNVTIVSADKDLSQLVTRRVNMFNYYT
GEMLGPEEVLTKFLAPPGRLADLLAIAGDKADGIRGAEGYGPVTAAKVLA
RHANLEDALEEICSTMLKKKKDPALISDTREQVLLARRIVELCSTVPLKS
RQGCKSLHTQAPYGLTPGDGASHLLDFMRCAGMPDLLRRTAQILGVNKDG
SQIL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0024215-3_exonuclease_N
IPR008918HhH2
IPR020045DNA_polI_H3TH
IPR0200465-3_exonucl_a-hlix_arch_N
IPR038969FEN_bact-like
IPR0362795-3_exonuclease_C_sf
IPR029060PIN-like_dom_sf