mRNA_F-serratus_M_contig106.598.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 280 bits (715), Expect = 5.810e-80 Identity = 173/460 (37.61%), Postives = 259/460 (56.30%), Query Frame = 1 Query: 34 PKGKTVLGTKTIFRRKIGKNGRIEKYKCRFVAQGFRQIKSIH*DESSSPTPSQASIMMVLGITAAKDWELRPLDVVMAYLEANVKEELYIELPEDYRNSCDQVGRLQKAMYGLVHAGLL*SKTYSTELAAKGFEQCQADPCVFRRVLRGNVVVIVVV*VDDLLVASETKRDEEQAINDLRFCFPIKDLGAGLYL-GCHITRDHDAGTLKFDQHHYVRTMASKFSVEETSTTSAAAGEKPLSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSCTKLSAWVDANFATCPDTRR*VSGGAVMLGGGATSWFSKMQKVTSVASPKSECVVLAEVVNELRFLRQVEGFLTPPPIDDNIIIIRENNEGAIKMATNRFNSRRTRHVGVKHHIVRDAVESGTVRTHYVKTGEQHAD 1410 P+G+ + +K F K K G+I+ +K R VA+GF QI ++ SSSP PS ASI ++L + K L DV AY A + EE++++LP + ++ + ++A+YGL +G + L GFEQC+ADPCVFR+++ VV+I+V+ VDD+LVA + D E+ + L FP K+LG + GC I RD +AGTL+ Q Y+ +M +F V+ TS A G D P+ E EE P REA+G +MW +T +RPD ++A + + P HW A ++ L T+D+GITY GS L+ +VDA++A D RR VSG A +GG S SK Q + S++S ++E + E V E F+R V F+ P +I ++ E+N+GAI + N +S RT+H+ V++H +R SG + +V T EQHAD Sbjct: 776 PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAG-SDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-----DLGPK--REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY--QRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVL-EDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHAD 1223
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 280 bits (715), Expect = 1.640e-79 Identity = 173/460 (37.61%), Postives = 259/460 (56.30%), Query Frame = 1 Query: 34 PKGKTVLGTKTIFRRKIGKNGRIEKYKCRFVAQGFRQIKSIH*DESSSPTPSQASIMMVLGITAAKDWELRPLDVVMAYLEANVKEELYIELPEDYRNSCDQVGRLQKAMYGLVHAGLL*SKTYSTELAAKGFEQCQADPCVFRRVLRGNVVVIVVV*VDDLLVASETKRDEEQAINDLRFCFPIKDLGAGLYL-GCHITRDHDAGTLKFDQHHYVRTMASKFSVEETSTTSAAAGEKPLSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSCTKLSAWVDANFATCPDTRR*VSGGAVMLGGGATSWFSKMQKVTSVASPKSECVVLAEVVNELRFLRQVEGFLTPPPIDDNIIIIRENNEGAIKMATNRFNSRRTRHVGVKHHIVRDAVESGTVRTHYVKTGEQHAD 1410 P+G+ + +K F K K G+I+ +K R VA+GF QI ++ SSSP PS ASI ++L + K L DV AY A + EE++++LP + ++ + ++A+YGL +G + L GFEQC+ADPCVFR+++ VV+I+V+ VDD+LVA + D E+ + L FP K+LG + GC I RD +AGTL+ Q Y+ +M +F V+ TS A G D P+ E EE P REA+G +MW +T +RPD ++A + + P HW A ++ L T+D+GITY GS L+ +VDA++A D RR VSG A +GG S SK Q + S++S ++E + E V E F+R V F+ P +I ++ E+N+GAI + N +S RT+H+ V++H +R SG + +V T EQHAD Sbjct: 1155 PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAG-SDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-----DLGPK--REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY--QRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVL-EDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHAD 1602
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 280 bits (715), Expect = 1.700e-79 Identity = 173/460 (37.61%), Postives = 259/460 (56.30%), Query Frame = 1 Query: 34 PKGKTVLGTKTIFRRKIGKNGRIEKYKCRFVAQGFRQIKSIH*DESSSPTPSQASIMMVLGITAAKDWELRPLDVVMAYLEANVKEELYIELPEDYRNSCDQVGRLQKAMYGLVHAGLL*SKTYSTELAAKGFEQCQADPCVFRRVLRGNVVVIVVV*VDDLLVASETKRDEEQAINDLRFCFPIKDLGAGLYL-GCHITRDHDAGTLKFDQHHYVRTMASKFSVEETSTTSAAAGEKPLSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSCTKLSAWVDANFATCPDTRR*VSGGAVMLGGGATSWFSKMQKVTSVASPKSECVVLAEVVNELRFLRQVEGFLTPPPIDDNIIIIRENNEGAIKMATNRFNSRRTRHVGVKHHIVRDAVESGTVRTHYVKTGEQHAD 1410 P+G+ + +K F K K G+I+ +K R VA+GF QI ++ SSSP PS ASI ++L + K L DV AY A + EE++++LP + ++ + ++A+YGL +G + L GFEQC+ADPCVFR+++ VV+I+V+ VDD+LVA + D E+ + L FP K+LG + GC I RD +AGTL+ Q Y+ +M +F V+ TS A G D P+ E EE P REA+G +MW +T +RPD ++A + + P HW A ++ L T+D+GITY GS L+ +VDA++A D RR VSG A +GG S SK Q + S++S ++E + E V E F+R V F+ P +I ++ E+N+GAI + N +S RT+H+ V++H +R SG + +V T EQHAD Sbjct: 1175 PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAG-SDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-----DLGPK--REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY--QRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVL-EDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHAD 1622
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 280 bits (715), Expect = 1.740e-79 Identity = 173/460 (37.61%), Postives = 259/460 (56.30%), Query Frame = 1 Query: 34 PKGKTVLGTKTIFRRKIGKNGRIEKYKCRFVAQGFRQIKSIH*DESSSPTPSQASIMMVLGITAAKDWELRPLDVVMAYLEANVKEELYIELPEDYRNSCDQVGRLQKAMYGLVHAGLL*SKTYSTELAAKGFEQCQADPCVFRRVLRGNVVVIVVV*VDDLLVASETKRDEEQAINDLRFCFPIKDLGAGLYL-GCHITRDHDAGTLKFDQHHYVRTMASKFSVEETSTTSAAAGEKPLSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSCTKLSAWVDANFATCPDTRR*VSGGAVMLGGGATSWFSKMQKVTSVASPKSECVVLAEVVNELRFLRQVEGFLTPPPIDDNIIIIRENNEGAIKMATNRFNSRRTRHVGVKHHIVRDAVESGTVRTHYVKTGEQHAD 1410 P+G+ + +K F K K G+I+ +K R VA+GF QI ++ SSSP PS ASI ++L + K L DV AY A + EE++++LP + ++ + ++A+YGL +G + L GFEQC+ADPCVFR+++ VV+I+V+ VDD+LVA + D E+ + L FP K+LG + GC I RD +AGTL+ Q Y+ +M +F V+ TS A G D P+ E EE P REA+G +MW +T +RPD ++A + + P HW A ++ L T+D+GITY GS L+ +VDA++A D RR VSG A +GG S SK Q + S++S ++E + E V E F+R V F+ P +I ++ E+N+GAI + N +S RT+H+ V++H +R SG + +V T EQHAD Sbjct: 1318 PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAG-SDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-----DLGPK--REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY--QRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVL-EDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHAD 1765
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE) HSP 1 Score: 263 bits (673), Expect = 1.840e-78 Identity = 161/460 (35.00%), Postives = 257/460 (55.87%), Query Frame = 1 Query: 34 PKGKTVLGTKTIFRRKIGKNGRIEKYKCRFVAQGFRQIKSIH*DESSSPTPSQASIMMVLGITAAKDWELRPLDVVMAYLEANVKEELYIELPEDYRNSCDQVGRLQKAMYGLVHAGLL*SKTYSTELAAKGFEQCQADPCVFRRVLRGNVVVIVVV*VDDLLVASETKRDEEQAINDLRFCFPIKDLGAGLYL-GCHITRDHDAGTLKFDQHHYVRTMASKFSVEETSTTSAAAGEKPLSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSCTKLSAWVDANFATCPDTRR*VSGGAVMLGGGATSWFSKMQKVTSVASPKSECVVLAEVVNELRFLRQVEGFLTPPPIDDNIIIIRENNEGAIKMATNRFNSRRTRHVGVKHHIVRDAVESGTVRTHYVKTGEQHAD 1410 P+G+ + +K F K K+G+IEK+K R VA+GF QI ++ SSSP PS ASI ++L + K +L DV A+ A + E++++ LP +V + ++A+YGL +G + L GFEQC+ADPCVFR+ ++ +VV D ++ + + D ++ + L FP KDLG ++ GC + RD +AGTL+ Q Y+ ++ ++F V+ TS+ A+ G D P+ + E+ P REA+G +MW +T +RPD ++A + + P HW+A + L T+D+GITY GS L+ +VDA++A D RR VSG A +GG S SK Q + S++S ++E + E V E F+R V F+ P +I ++ E+N+GA+ + N +S R++H+ V++H +R SG + +V T EQHAD Sbjct: 39 PEGRRPVSSKWRFTWKTNKDGKIEKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKSLKLNHWDVKQAFTHAKLDEDVFLRLPAGCGEKSHKVVKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRK-MKDDVVXXXXXXXXDXILVAGSDDDCKELLASLNKAFPTKDLGECVWFDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGV-----DIGPKRDDESG--GEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITY--ERGSGLGLAVYVDASYADAED-RRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVL-EDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHAD 486
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE) HSP 1 Score: 262 bits (670), Expect = 1.600e-75 Identity = 175/472 (37.08%), Postives = 256/472 (54.24%), Query Frame = 1 Query: 7 RQVWEVVPRPKGKTVLGTKTIFRR---KIGKNGRIEKYKCRFVAQGFRQIKSIH*DESSSPTPSQASIMMVLGITAAKDWELRPLDVVMAYLEANVKEELYIELPEDYRNSCDQVGRLQKAMYGLVHAGLL*SKTYSTELAAKGFEQCQADPCVFRRVLRGNVVVIVVV*VDDLLVASETKRDEEQAINDLRFCFPIKDLGAGLYL-GCHITRDHDAGTLKFDQHHYVRTMASKFSVEETSTTSAAAGEKPLSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSCTKLSAWVDANFATCPDTRR*VSGGAVMLGGGATSWFSKMQKVTSVASPKSECVVLAEVVNELRFLRQVEGFLTPPPIDDNIIIIRENNEGAIKMATNRFNSRRTRHVGVKHHIVRDAVESGTVRTHYVKTGEQHAD 1410 R+ WE R + + LG +F R K K G+I+ K R VA+GF QI SI SSSP PS ASI ++L + K L DV AY A + EE++++LP + ++ + ++A+YGL +G + L GFEQC+ADPCVFR+++ VV+I+V+ VDD+LVA + D E+ + L FP K+LG + GC I RD DAGTL+ Q Y+ +M +F V+ TS A G D P+ E ++ P REAVG +MW +T +RPD ++A + + P HW A ++ L T+D+GITY GS L+ +VDA +A D RR VS A +GG S SK + + S++S ++E + E V E F+R V F+ P +I ++ E+N+GAI + N +S +H+ V+ H +R SG +V T EQHAD Sbjct: 355 REGWEQAMREEFEGHLGHGDVFIRRRWKTNKEGKIDTLKARRVARGFSQITSIISIPSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAG-SDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-----DLGPK--REDDKGGEWPVREAVGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY--QRGSGLGLAVYVDARYADTED-RRSVSRLATTVGGTVVSHGSKARSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETRGSSIQVL-EDNQGAIALVQNPLSSGGMKHIDVRFHFIRGLFRSGDTSVKFVPTTEQHAD 814
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A6H5KR39_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR39_9PHAE) HSP 1 Score: 256 bits (654), Expect = 3.260e-74 Identity = 162/465 (34.84%), Postives = 252/465 (54.19%), Query Frame = 1 Query: 19 EVVPRPKGKTVLGTKTIFRRKIGKNGRIEKYKCRFVAQGFRQIKSIH*DESSSPTPSQASIMMVLGITAAKDWELRPLDVVMAYLEANVKEELYIELPEDYRNSCDQVGRLQKAMYGLVHAGLL*SKTYSTELAAKGFEQCQADPCVFRRVLRGNVVVIVVV*VDDLLVASETKRDEEQAINDLRFCFPIKDLG-AGLYLGCHITRDHDAGTLKFDQHHYVRTMASKFSVEETSTTSAAAGEKPLSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSCTKLSAWVDANFATCPDTRR*VSGGAVMLGGGATSWFSKMQKVTSVASPKSECVVLAEVVNELRFLRQVEGFLTPPPIDDNIIIIRENNEGAIKMATNRFNSRRTRHVGVKHHIVRDAVESGTVRTHYVKTGEQHAD 1410 E+ P+G+ + K IF K + G I +K R VA+GF QI + SSS PS SI ++ ++ D+ AY A +KEE+Y+ LP+ + ++++A+YGL +G + L + G+EQC+ DPC+FR+V+ G VV ++V+ VDD+++ S T+ + E+ + L+ FP+KDLG Y GC I D + GT K Q Y+ +M ++F+V T+ T A + D P+ + E+ + P REA+G LMW TRPD A ++L KI +P W A R + TKD+GITY GS L +VD+++A RR +G AV +GG +K Q VT+ ++ ++E + E V E F+R V F+ P I +RE+NEGA+ + N F+S R++H+ + H +R+ ++G + YV T EQHAD Sbjct: 151 EISGLPEGRKAISAKWIFSHKTNEKGLIVDFKARMVARGFSQIPGVDFHHSSSACPSAVSIKTMVAVSTENGRRPVHWDIKQAYTHAKLKEEIYLRLPDGCGVWTGKAVKVERALYGLKQSGREWGFEAADALISNGYEQCRVDPCIFRKVVDGEVVGLIVIYVDDIML-SATEEEREELLASLQKRFPVKDLGDCTWYDGCAIEVDLENGTTKLSQTAYIESMLNRFNVTTTAPTPAVVDD-----DLGPKRDDESSVDK--PVREAIGCLMWLL-FTRPDIALPLNKLQKIAHSPTERMWNALVRIMSYLNETKDLGITY--VRGSGLDLDVFVDSSYADSTVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTTEAEYIAAGEGVKEALFVRGVLSFIAPET-SGATIRVREDNEGALALVQNPFSSARSKHIDERFHFIRELFKAGNITADYVSTAEQHAD 603
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A6H5K0Q0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Q0_9PHAE) HSP 1 Score: 258 bits (659), Expect = 5.180e-74 Identity = 164/465 (35.27%), Postives = 252/465 (54.19%), Query Frame = 1 Query: 19 EVVPRPKGKTVLGTKTIFRRKIGKNGRIEKYKCRFVAQGFRQIKSIH*DESSSPTPSQASIMMVLGITAAKDWELRPLDVVMAYLEANVKEELYIELPEDYRNSCDQVGRLQKAMYGLVHAGLL*SKTYSTELAAKGFEQCQADPCVFRRVLRGNVVVIVVV*VDDLLVASETKRDEEQAINDLRFCFPIKDLG-AGLYLGCHITRDHDAGTLKFDQHHYVRTMASKFSVEETSTTSAAAGEKPLSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSCTKLSAWVDANFATCPDTRR*VSGGAVMLGGGATSWFSKMQKVTSVASPKSECVVLAEVVNELRFLRQVEGFLTPPPIDDNIIIIRENNEGAIKMATNRFNSRRTRHVGVKHHIVRDAVESGTVRTHYVKTGEQHAD 1410 E+ P+G+ + K IF K + G I +K R VA+GF QI + SSS PS SI ++ ++ D+ AY A +KEE+Y+ LP+ + ++++A+YGL +G + L + G+EQC+ DPC+FR+V+ G VV ++V+ VDD+++ + T+ + E+ + L+ FP+KDLG Y GC I D + GT K Q Y+ +M ++F+V T+ T A + D P+ + E+ + P REA+G LMW TRPD A ++L KI +P W A R + TKD+GITY GS L +VD+++A RR +G AV +GG F K Q VT+ ++ ++E V E V E F+R V F+ P I +RE+NEGA+ + N F+S R++H+ V+ H +R+ + G + YV T EQHAD Sbjct: 352 EISGLPEGRKAISAKWIFSHKTNEKGLIVDFKARMVARGFSQIPGVDFHHSSSACPSAVSIKTMVAVSTENGRRPVHWDIKQAYTHAKLKEEIYLRLPDGCGVWTGKAVKVERALYGLKQSGREWGFEAADALISNGYEQCRVDPCIFRKVVDGEVVGLIVIYVDDIMLCA-TEEEREELLASLQKGFPVKDLGDCTWYDGCAIEVDLENGTTKLSQTAYIESMLNRFNVTTTAPTPAVVDD-----DLGPKRDDESSVDK--PVREAIGCLMWLL-FTRPDIALPLNKLQKIAHSPTERMWNALVRIMSYLNETKDLGITY--VRGSGLDLDVFVDSSYADSTVDRRSTTGLAVTVGGTVVCAFMKTQPVTAQSTTEAEYVAAGEGVKEALFVRGVLSFIAPET-SGATIRVREDNEGALALVQNPFSSARSKHIDVRFHFIRELFKVGKITADYVSTEEQHAD 804
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A6H5L6D6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D6_9PHAE) HSP 1 Score: 257 bits (657), Expect = 7.190e-74 Identity = 163/465 (35.05%), Postives = 253/465 (54.41%), Query Frame = 1 Query: 19 EVVPRPKGKTVLGTKTIFRRKIGKNGRIEKYKCRFVAQGFRQIKSIH*DESSSPTPSQASIMMVLGITAAKDWELRPLDVVMAYLEANVKEELYIELPEDYRNSCDQVGRLQKAMYGLVHAGLL*SKTYSTELAAKGFEQCQADPCVFRRVLRGNVVVIVVV*VDDLLVASETKRDEEQAINDLRFCFPIKDLG-AGLYLGCHITRDHDAGTLKFDQHHYVRTMASKFSVEETSTTSAAAGEKPLSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSCTKLSAWVDANFATCPDTRR*VSGGAVMLGGGATSWFSKMQKVTSVASPKSECVVLAEVVNELRFLRQVEGFLTPPPIDDNIIIIRENNEGAIKMATNRFNSRRTRHVGVKHHIVRDAVESGTVRTHYVKTGEQHAD 1410 E+ P+G+ + K IF K + G I +K R VA+GF QI + SSS PS SI ++ ++ D+ AY A +KEE+Y+ LP+ + ++++A+YGL +G + L + G+EQC+ DPC+FR+V+ G VV ++V+ VDD+++ S T+ + E+ + L+ FP+KDLG Y GC I D + GT K Q Y+ +M ++F+V T+ T A + D P+ + E+ + P REA+G LMW TRPD A ++L KI +P W A R + TKD+GITY GS L +VD+++A RR +G AV +GG +K Q VT+ ++ ++E + E V E F+R V F+ P I +RE+NEGA+ + N F+S R++H+ V+ H +R+ ++G + YV T EQHAD Sbjct: 331 EISGLPEGRKAISAKWIFSHKTNEKGLIVDFKARMVARGFSQIPGVDFHHSSSACPSAVSIKTMVAVSTENGRRPVHWDIKQAYTHAKLKEEIYLRLPDGCGVWTGKAVKVERALYGLEQSGREWGFEAADALISNGYEQCRVDPCIFRKVVDGEVVGLIVIYVDDIML-SATEEEREELLASLQKRFPVKDLGDCTWYDGCAIEVDLENGTTKLSQTAYIESMLNRFNVTTTAPTPAVVDD-----DLGPKRDDESSVDK--PVREAIGCLMWLL-FTRPDIALPLNKLQKIAHSPTERMWNALVRIMSYLNETKDLGITY--VRGSGLDLDVFVDSSYADSTVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTTEAEYIAAGEGVKEALFVRGVLSFIAPET-SGATIRVREDNEGALALVQNPFSSARSKHIDVRFHFIRELFKAGKITADYVSTEEQHAD 783
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE) HSP 1 Score: 257 bits (656), Expect = 7.210e-74 Identity = 165/466 (35.41%), Postives = 254/466 (54.51%), Query Frame = 1 Query: 34 PKGKTVLGTKTIFRRKIGKNGRIEKYKCRFVAQGFRQIKSIH*DESSSPTPSQASIMMVLGITAAKDWELRPLDVVMAYLEANVKEELYIELPEDYRNSCDQVGRLQKAMYGLVHAGLL*SKTYSTELAAKGFEQCQADPCVFRRVLRGNVVVIVVV*VDDLLVASETKRDEEQAINDLRFCFPIKDLGAGLYL-GCHITRDHDAGTLKFDQHHYVRTMASKFSVEETSTTSAAAGEKPLSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSCTKLSAWVDANFATCPDTRR*VSGGAVMLGGGATSWFSKMQKVTSVASP-------KSECVVLAEVVNELRFLRQVEGFLTPPPIDDNIIIIRENNEGAIKMATNRFNSRRTRHVGVKHHIVRDAVESGTVRTHYVKTGEQHA 1407 P+G+ + +K F K K G+I+ +K R VA+GF QI ++ SSSP PS ASI ++L + K L DV AY A + EE++++LP + ++ + ++A+YGL +G + L GFEQC+ADPCVFR+++ VV+I+V+ VDD+LVA + D E+ + L FP K+L + GC I RD + GTL+ Q Y+ +M +F V+ TS A+ G D P+ + E+ P REA+G +MW +T +RPD ++A + + P HW A ++ L T+D+GITY GS L+ +VDA++A D RR VSG A +GG S SK Q + S++S ++E E V E F+R V F+ P +I ++ +N+GA+ + N +S RT+H+ V+ H +R SG + ++ T EQHA Sbjct: 330 PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAG-SDEDCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGV-----DLGPK--RDDEKGGEWPVREAIGSIMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY--QRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTXXXXXXTEAEYFTAGECVKEALFVRAVLSFVAPETSGSSIQVL--DNQGAMALVQNPLSSGRTKHIDVRFHFIRVLFRSGDISVKFIPTTEQHA 782 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig106.598.1 >prot_F-serratus_M_contig106.598.1 ID=prot_F-serratus_M_contig106.598.1|Name=mRNA_F-serratus_M_contig106.598.1|organism=Fucus serratus male|type=polypeptide|length=126bp MASKFSVEETSTTSAAAGEKPLSKDDAPQTEAETEEMRVTPYREAVGVLMback to top mRNA from alignment at F-serratus_M_contig106:681630..683039- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig106.598.1 ID=mRNA_F-serratus_M_contig106.598.1|Name=mRNA_F-serratus_M_contig106.598.1|organism=Fucus serratus male|type=mRNA|length=1410bp|location=Sequence derived from alignment at F-serratus_M_contig106:681630..683039- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig106:681630..683039- >mRNA_F-serratus_M_contig106.598.1 ID=mRNA_F-serratus_M_contig106.598.1|Name=mRNA_F-serratus_M_contig106.598.1|organism=Fucus serratus male|type=CDS|length=756bp|location=Sequence derived from alignment at F-serratus_M_contig106:681630..683039- (Fucus serratus male)back to top |