prot_F-serratus_M_contig106.598.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig106.598.1
Unique Nameprot_F-serratus_M_contig106.598.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length126
Homology
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A6A4YX65_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YX65_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 7.610e-18
Identity = 52/106 (49.06%), Postives = 62/106 (58.49%), Query Frame = 0
Query:   21 PLSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPG-SCTKLSAWVDANFATCPDTRR 125
            PLSK     T  +   M+  PYR  VG +M+ A  +RPD AYA  QL +    PGLAHWRAAKR L+    T   G+  GG    S   LSA+VDAN+A CPDTRR
Sbjct:  333 PLSKAQCASTPEDIAFMQTKPYRSIVGSIMYLAMGSRPDLAYALQQLSQFLHNPGLAHWRAAKRVLRYLRGTSLHGLMLGGRDYVSKPFLSAYVDANYAMCPDTRR 438          
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A6G0X7I6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X7I6_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.140e-17
Identity = 50/107 (46.73%), Postives = 61/107 (57.01%), Query Frame = 0
Query:   20 KPLSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSCTK-LSAWVDANFATCPDTRR 125
            K LSK     T  +   M   PYR  VG LM+ A  TRPD A+  HQL +  D PG AHWRAAKR L+    T+  G+  GG+       LSA+VD ++A CPDTRR
Sbjct: 1458 KTLSKSQCATTPEDVSFMASKPYRSLVGSLMYLAMGTRPDLAFPLHQLSQFLDNPGPAHWRAAKRALRYLNGTRSRGLLLGGSDSVHNPFLSAYVDEDYANCPDTRR 1564          
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A6A4ZJP4_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZJP4_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 6.530e-17
Identity = 48/106 (45.28%), Postives = 61/106 (57.55%), Query Frame = 0
Query:   21 PLSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPG-SCTKLSAWVDANFATCPDTRR 125
            PLSK     +  +   M   PYR  VG +M+ A  +RPD AYA  QL +    PG+AHWRAAKR L+      ++G+  GG    S   L A+VDAN+A CPDTRR
Sbjct:  133 PLSKAQCASSPEDIAFMHTKPYRSIVGSIMYLAMGSRPDWAYAIKQLSQFLHNPGIAHWRAAKRVLRYLQGNSNLGLMLGGRDYVSKPFLFAYVDANYAMCPDTRR 238          
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A6G0W6P6_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W6P6_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 3.320e-16
Identity = 49/107 (45.79%), Postives = 60/107 (56.07%), Query Frame = 0
Query:   20 KPLSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSCTK-LSAWVDANFATCPDTRR 125
            K LSK     T  +   M   PYR  VG  M+ A  TRPD A+   QL +  D PG AHWRAAKR L+    T+  G+  GG+       LSA+VDA++A CPDTRR
Sbjct:  609 KTLSKSQCATTPEDISFMASKPYRSLVGSPMYLAMGTRPDLAFPLQQLSQFLDNPGPAHWRAAKRALRYLNGTRSRGLLLGGSDSVHNPFLSAYVDADYANCPDTRR 715          
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A6G0W780_9STRA (Integrase catalytic domain-containing protein n=3 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W780_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 3.480e-16
Identity = 49/107 (45.79%), Postives = 60/107 (56.07%), Query Frame = 0
Query:   20 KPLSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSCTK-LSAWVDANFATCPDTRR 125
            K LSK     T  +   M   PYR  VG LM+ A  TRPD A+   QL +  D P  AHWRAAKR L+    T+  G+  GG+       LSA+VDA++A CPDTRR
Sbjct: 1753 KTLSKSQCATTPEDISFMASKPYRSLVGSLMYLAMGTRPDLAFPLQQLSQFLDNPDPAHWRAAKRALRYLNGTRSRGLLLGGSDSVHNPFLSAYVDADYANCPDTRR 1859          
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A329RH08_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RH08_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 2.570e-15
Identity = 41/109 (37.61%), Postives = 60/109 (55.05%), Query Frame = 0
Query:   22 LSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAP-----GSCTKLSAWVDANFATCPDTRR 125
            LS    P ++AE +EM+  PYREAVG +M+    TRPD A+   ++ +    PG+ HW    R L+    TKD G+  GG+           L A+ D++++ CPDTRR
Sbjct:   50 LSLSSQPSSDAEKDEMKDIPYREAVGSVMYLMVGTRPDMAFYLREVSQFLANPGMEHWNPIVRGLKYLSGTKDYGLLLGGSTDITPQNLANSLIAYSDSDYSNCPDTRR 158          
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A5D6XRE8_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRE8_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.100e-14
Identity = 43/103 (41.75%), Postives = 58/103 (56.31%), Query Frame = 0
Query:   28 PQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSC-----TKLSAWVDANFATCPDTRR 125
            P T+ +TEEM   PYR+AVG +M+    TRPD AY   ++ + +  PG  +W A K  L+    T  +GIT GG          T LSA+ DA++A C DTRR
Sbjct:  176 PSTKEKTEEMANVPYRDAVGSVMYLIMSTRPDHAYFLREVSQFHVNPGREYWNAVKHGLKYLKGTTALGITLGGRENLTLLEKKTFLSAYTDASYANCKDTRR 278          
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A6G0WNM5_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WNM5_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.700e-14
Identity = 47/105 (44.76%), Postives = 59/105 (56.19%), Query Frame = 0
Query:   22 LSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSCTK-LSAWVDANFATCPDTRR 125
            LSK     T  +   M   PYR  VG LM+ A  TRPD A+   QL +  + PG AHWRAAKR L+    T+  G+  GG+       LSA+VDA++A C DTRR
Sbjct:  270 LSKSQCASTPDDIAFMASKPYRSLVGSLMYLAMGTRPDLAFPLQQLSQFLENPGPAHWRAAKRVLRYINGTRSRGLLLGGSDFIHKPFLSAYVDADYANCKDTRR 374          
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A6G0W2A7_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W2A7_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.800e-14
Identity = 47/105 (44.76%), Postives = 59/105 (56.19%), Query Frame = 0
Query:   22 LSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSCTK-LSAWVDANFATCPDTRR 125
            LSK     T  +   M   PYR  VG LM+ A  TRPD A+   QL +  + PG AHWRAAKR L+    T+  G+  GG+       LSA+VDA++A C DTRR
Sbjct:  346 LSKSQCASTPDDIAFMASKPYRSLVGSLMYLAMGTRPDLAFPLQQLSQFLENPGPAHWRAAKRVLRYINGTRSRGLLLGGSDFIHKPFLSAYVDADYANCKDTRR 450          
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A6G0X457_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X457_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.860e-14
Identity = 47/105 (44.76%), Postives = 59/105 (56.19%), Query Frame = 0
Query:   22 LSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSCTK-LSAWVDANFATCPDTRR 125
            LSK     T  +   M   PYR  VG LM+ A  TRPD A+   QL +  + PG AHWRAAKR L+    T+  G+  GG+       LSA+VDA++A C DTRR
Sbjct:  548 LSKSQCASTPDDIAFMASKPYRSLVGSLMYLAMGTRPDLAFPLQQLSQFLENPGPAHWRAAKRVLRYINGTRSRGLLLGGSDFIHKPFLSAYVDADYANCKDTRR 652          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A4YX65_9STRA7.610e-1849.06Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6G0X7I6_9STRA1.140e-1746.73Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6A4ZJP4_9STRA6.530e-1745.28Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6G0W6P6_9STRA3.320e-1645.79Integrase catalytic domain-containing protein n=1 ... [more]
A0A6G0W780_9STRA3.480e-1645.79Integrase catalytic domain-containing protein n=3 ... [more]
A0A329RH08_9STRA2.570e-1537.61Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
A0A5D6XRE8_9STRA1.100e-1441.75Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6G0WNM5_9STRA1.700e-1444.76Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6G0W2A7_9STRA1.800e-1444.76Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6G0X457_9STRA1.860e-1444.76Reverse transcriptase Ty1/copia-type domain-contai... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig106contigF-serratus_M_contig106:681978..682355 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig106.598.1mRNA_F-serratus_M_contig106.598.1Fucus serratus malemRNAF-serratus_M_contig106 681630..683039 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig106.598.1 ID=prot_F-serratus_M_contig106.598.1|Name=mRNA_F-serratus_M_contig106.598.1|organism=Fucus serratus male|type=polypeptide|length=126bp
MASKFSVEETSTTSAAAGEKPLSKDDAPQTEAETEEMRVTPYREAVGVLM
WTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYG
GAPGSCTKLSAWVDANFATCPDTRR*
back to top