prot_F-serratus_M_contig93.20687.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig93.20687.1
Unique Nameprot_F-serratus_M_contig93.20687.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length529
Homology
BLAST of mRNA_F-serratus_M_contig93.20687.1 vs. uniprot
Match: D8LMZ2_ECTSI (COG2350: Uncharacterized protein conserved in bacteria n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMZ2_ECTSI)

HSP 1 Score: 468 bits (1203), Expect = 2.980e-157
Identity = 233/458 (50.87%), Postives = 316/458 (69.00%), Query Frame = 0
Query:   79 RHVENGDMAGFGWGWLRSGRRRRTCLEA-----GD-KGDDVLKMKSMGSSIKSEDKVLTGGEDDMRRAMFDMDPDSDRQGPMYFGTDGFDGPERLWDKPLEEIRFAECYVVFCIDREERPDEPKNFPFWGVRQAVHREHLKWARVLARALENDTDREAAVLWDRTILSPSKYKTIGNIMCVRAHSKEAAIRLLESDPFRAADLYETVSLYRYPYSTAGEFNWQLAAHPYVALSMDREGQSRVREDNFPRHLEYLGNTKRCTGVGPIFDPSLDKDDPASAPVGSLVFFNAATDEEARETVENDPLNEAGLFESMFIARFNDLDLSGLHLAYPSRHDPLRDIIAKEGLAVEDDFP-KDPDWRPFSNLTWLQAENDKRRDEEYLEKRKEFYEQRDIRLEYNRTNKDAKFYHGVYVYVGRRNETEWYDYWPTYLGPN-DEWNTERFDLKNSYPPVDIYEDDL 528
            R VE G   G GW    + RRR  CL+A     GD KGDD+L++K++ +++  ED+V    ++ MRR MFDMDPDS  +GPMYFG  G    E    K  EE+RF + Y+ FC+DREE  DE KN+  WGVR   H EH+KWAR+  R  E+D DREA +LW+R++LSPSK + IGN+ C+R+++KE A+RLLE DP+R + L+ TVSLYRYPY+  G FNW L+  PY+AL MD++G +++RE N   HLEY   T+RC G GP+    L +D P + PVGSL+FFNA  DEEARET E DP N+AGL++S+F+ARFN++DLSG+ L   +R DP+RD++AKEGL  E ++P K   +  F N+ WL+ E +K+++++Y+E R + Y+QRD R+E    N+ A F  GVYVY+G+R ETEWYDYWPT  GP+ D    E + +   YPPVD +EDDL
Sbjct:   76 RAVEGGRGVG-GWRSHGATRRRSGCLQAKNTPLGDGKGDDLLRLKNVAAAVPEEDRVDDHSDEAMRRLMFDMDPDSKDKGPMYFGDAGMYTDEVNHVKYPEEVRFPQSYLAFCVDREETEDEDKNYVTWGVRAKAHWEHVKWARIAKRTFEDDPDREAGILWNRSVLSPSKCRVIGNMFCIRSYTKEGALRLLEEDPYRKSGLFGTVSLYRYPYNMGGGFNWHLSNFPYLALCMDKKGSAKLREKNNDAHLEYYERTRRCIGEGPVLSSDLAEDSPRNKPVGSLMFFNAINDEEARETAEGDPFNQAGLYDSVFVARFNEIDLSGIGLVRANRIDPMRDMMAKEGLDRECEYPVKFGKYDLFENMKWLKTEVEKKQEQQYMEHRLKLYQQRDRRIEREEINEGALFRPGVYVYMGKRTETEWYDYWPTKAGPDADAAGEEFYTMDACYPPVDHFEDDL 532          
BLAST of mRNA_F-serratus_M_contig93.20687.1 vs. uniprot
Match: A0A6H5JNB6_9PHAE (YCII domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNB6_9PHAE)

HSP 1 Score: 390 bits (1003), Expect = 1.690e-127
Identity = 209/482 (43.36%), Postives = 280/482 (58.09%), Query Frame = 0
Query:  137 MRRAMFDMDPDSDRQGPMYFGTDGFDGPERLWDKPLEEIRFAECYVVFCIDREERPDEPKNFPFWGVRQAVHREHLKWARVLARALENDTDREAAVLWDRTILSPSKYKTIGNIMCVRAHSK--------------------------EAAIRLLESDPFRAADLYETVSLYRYPYSTAGEFNWQLAAHPYVALSMDREGQSRVREDNFPRHLEYLGNTKR-CTGVGPIFDPSLDKDDPASAPVGSLVFFNAATDEEARETVENDPLNEAGLFESMFIARFNDLDLSGLHLAYPSRHDPLRDIIAKEGLAVEDDFP-KDPDWRPFSNLTWLQAENDKRRDEEYLEKRKEFYEQR-------------------------------------------------------------DIRLEYNRTNKDAKFYHGVYVYVGRRNETEWYDYWPTYLGPN-DEWNTERFDLKNSYPPVDIYEDDL 528
            MRR MFDMDPDS  +GPMYFG  G    E    K  EE+RF + Y+ FC+DREE  DE KN+  WGVR   H EH+KWAR+  R  E+D DREA +LW+R++LSPSK + IGN+ C+R+++K                          E A+RLLE DP+R + L+ TVSLYRYPY+  G FNW L+  PY+AL MD++G++++RE N   HLEY   T+R C G GPI    L +D P + PVGSL+FFNA  DEEARET E DP N+AGL++S+F+ARFN++DLSG+ L   +R DP+RD++A+EGL  E ++P K   +  F N+ WL+ E +K+++++Y+E R + Y+QR                                                             D R+E    N+ A F  GVYVY+G+R ETEWYDYWPT  GP+ D    E + +   YPPVD +EDDL
Sbjct:   23 MRRLMFDMDPDSKDKGPMYFGDAGMYTDEVNHVKYPEEVRFPQSYLAFCVDREETEDEDKNYVTWGVRAKAHWEHVKWARIAKRTFEDDPDREAGILWNRSVLSPSKCRVIGNMFCIRSYTKASAIHLGYFYVLLRKIGSDEAVAGRKEGALRLLEEDPYRKSGLFGTVSLYRYPYNMGGGFNWHLSNFPYLALCMDKKGKAKLREKNNDAHLEYYEKTRRRCIGEGPILSSDLAEDSPRNKPVGSLMFFNAINDEEARETAEGDPFNQAGLYDSVFVARFNEIDLSGIGLVRANRIDPMRDMMAQEGLDRECEYPVKFGKYDLFENMKWLKTEVEKKQEQQYMEHRLKLYQQRCVGGGAVVTSADDTPRWYDGMPSYGGRNVRAGTAVKAPVSAAVEGFSDVWLKAAHTVVVARDRRIEREEVNEGALFRPGVYVYMGKRTETEWYDYWPTKAGPDADAAGEEFYTMDACYPPVDHFEDDL 504          
BLAST of mRNA_F-serratus_M_contig93.20687.1 vs. uniprot
Match: A0A7S1FVC6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FVC6_9STRA)

HSP 1 Score: 114 bits (285), Expect = 1.410e-24
Identity = 84/238 (35.29%), Postives = 120/238 (50.42%), Query Frame = 0
Query:  209 REHLKWARVL-ARALENDTDREAAVLWDRTILSPSKYKTIGNIMCVRAHSKEAAIRLLESDPFRAADLY---------ETVSLYRYPYSTAGEFNWQ--LAAHPYVALSMDR-EGQSRVREDNFPRHLEYLGNTKRCTGVGPIFDPSLDKDDPASAP---VGSLVFFNAATDEEARETVENDPLNEAGLFESMFIARFNDLDLSGLHLAY------PSRHDPLRDIIAKE-GLAVEDD 423
            R    W  VL AR    D D  A V+WD  +LSP   + +GN+ C+ A + E A RL E +P     +Y         E   +YR+ +    +          P +A   DR EG   +R      HLEYL N+++    GP+FD   + DD A+AP   VGSLV FNA + E ARE V+NDP   AGLFES+ +  +N +D+SG   A       P+  D +  I+ ++ G+ V++D
Sbjct:    8 RPRTSWFHVLWAREQTLDADAPAEVIWDHALLSPDLQREVGNVACIDAKTPEDARRLAEEEP---RSVYFSDGNNRGAEATRVYRWNHVQDVDLRKDDGRGGFPCLAACFDRKEGVDGLRAATRKSHLEYLINSEKVIAAGPLFDIPREGDDNAAAPAAPVGSLVLFNAPSQEAAREFVDNDPYALAGLFESVGVNFYNTVDVSGKFFAPEKFAVDPTDVDQVTRIMLEDVGVDVDED 242          
BLAST of mRNA_F-serratus_M_contig93.20687.1 vs. uniprot
Match: A0A7S2WMJ0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WMJ0_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.340e-20
Identity = 101/346 (29.19%), Postives = 152/346 (43.93%), Query Frame = 0
Query:  121 SSIKSEDKVLTGG--------EDDMRRAMFDMDPDSDRQGPMYFGTDGFDGPER---LWDKPLEEIRFA-ECYVVFCIDRE-ERPDEPKNFPFWGVRQAVHREHLKWARVLARALEN-DTDREAAVLWDRTILSPSKYKTIGNIMCVRAHSKEAAIRLLESDPFRAADLYETVSLYRYPYSTAGEFNWQ------------LAAHPYVALSMDREGQ--SRVREDNFPRHLEYLGNTKRCTGVGPIFDPSLDKDDPASA-PVGSLVFFNAATDEEARETVENDPLNEAGLFESMFIARFNDLDLSGLHLA----YPSRHDP---LRDIIAKEGLAVEDDFPKDPDW 430
            S +KS++ V T G          D   +  D   D D      FG  G +  E    + + P+   R A   +V    DR     D+         R  +  +H+ + R      E  +T+ +A VLW   IL+    +TIG+ MC+ + + E A + L  DP          SL     S    F W+             +  P + L+MDR+    S+VR      HLEYL  ++R    GP+  P+  KDDPAS  PVG L+ FNA   +EA    ENDPL +AGL+ SM + R+N LD++G  +     +  + +P   ++D +   G  V+D   K  +W
Sbjct:   26 SIMKSKNWVSTTGLRMSFVADSSDYSTSESDYTSDEDINPDHQFGNQGDNDEEESPSIEEIPVPMSRNAGNRFVAMVFDRALSSSDQDDVMALHQQRIDLTEDHIMFCRKQNLFNETFNTESKADVLWSFQILASDLKRTIGHAMCIESKTLEDAHQCLVKDPI-------VQSLTGGDTSNIPFFRWRHIRDNTLREDDGRSGMPSLWLAMDRDDTDTSKVRSKLEKDHLEYLIRSERVIAAGPLHLPTELKDDPASQMPVGDLILFNAMDRDEAVAFAENDPLAQAGLYNSMKVHRYNSLDVTGKFITKNFIFDGKTEPTLEMKDAMEYWGYPVDDRQTKWINW 364          
BLAST of mRNA_F-serratus_M_contig93.20687.1 vs. uniprot
Match: A0A7S2DFL6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DFL6_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 4.180e-15
Identity = 46/167 (27.54%), Postives = 82/167 (49.10%), Query Frame = 0
Query:  232 VLWDRTILSPSKYKTIGNIMCVRAHSKEAAIRLLESDPFRAADLYETVSLYRYPYSTAGEFNWQLAAHPYVALSMDREGQSRVREDNFPRHLEYLGNTKRCTGVGPIFDPSLDKDDPASAPVGSLVFFNAATDEEARETVENDPLNEAGLFESMFIARFNDLDLSGL 398
            +LW+R++   +     G +    A S+E    L+  DP+    ++  + ++R+  +   E  ++  + P+V L +D+ G    R    P HLE+L  +K     GPIF            P+GS V   A   E A    + DP  +AG+FES+ I+ ++++D++GL
Sbjct:   49 ILWERSLYEDNDMYIHGCVTGYAAASREELDTLMSKDPYITEGVFSDIQVFRWKQNNDPELRFEPKSAPHVFLCLDKPGMLATRTATRPDHLEWLQTSKLVMAAGPIFSAESGAGALEDGPIGSFVCAAADDVESAHAWSKEDPYAQAGIFESVRISHYSEMDVTGL 215          
BLAST of mRNA_F-serratus_M_contig93.20687.1 vs. uniprot
Match: A0A7S2P7F9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P7F9_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.310e-13
Identity = 48/138 (34.78%), Postives = 80/138 (57.97%), Query Frame = 0
Query:  300 PYVALSMDR-EGQSR-VREDNFPRHLEYLGNTKRCTGVGPIFDPSLDKDDPASAPVGSLVFFNAATDEEARETVENDPLNEAGLFESMFIARFNDLDLSGL----HLAYPSRHD-PLRDIIAKEGLAVEDDFPKDPDW 430
            P + L+ DR E  S  +RE+    HLEYL  +++    GP+   + +K DP S   G+L+ FNA    +A E VENDP+  AG++E+M + R+N LD++G     +L YP+++   +++ +   G  V+D+  K  +W
Sbjct:   24 PTMLLAFDRPEAMSDGLREEVQNEHLEYLIRSEKIIACGPLHVATQEKSDPKSVAAGTLMIFNAKDRNDAIEFVENDPMAVAGVYETMTVHRYNQLDVTGKFVSENLYYPNQNTYQMKEAMEYWGYPVDDEQTKWLNW 161          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig93.20687.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LMZ2_ECTSI2.980e-15750.87COG2350: Uncharacterized protein conserved in bact... [more]
A0A6H5JNB6_9PHAE1.690e-12743.36YCII domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S1FVC6_9STRA1.410e-2435.29Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2WMJ0_9STRA1.340e-2029.19Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2DFL6_9STRA4.180e-1527.54Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2P7F9_9STRA1.310e-1334.78Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005545YCII-relatedPFAMPF03795YCIIcoord: 301..391
e-value: 4.3E-6
score: 27.0
NoneNo IPR availableGENE3D3.30.70.1060coord: 180..291
e-value: 4.9E-7
score: 31.7
coord: 300..395
e-value: 2.0E-16
score: 61.8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..528
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.498
IPR011008Dimeric alpha-beta barrelSUPERFAMILY54909Dimeric alpha+beta barrelcoord: 301..391
IPR011008Dimeric alpha-beta barrelSUPERFAMILY54909Dimeric alpha+beta barrelcoord: 201..284

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig93contigF-serratus_M_contig93:538836..545883 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig93.20687.1mRNA_F-serratus_M_contig93.20687.1Fucus serratus malemRNAF-serratus_M_contig93 538355..545891 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig93.20687.1 ID=prot_F-serratus_M_contig93.20687.1|Name=mRNA_F-serratus_M_contig93.20687.1|organism=Fucus serratus male|type=polypeptide|length=529bp
MPTKTTFVERALLVVLLGSPAGKSFAPYQQIAPSLCHTRRWTRTRHPLTQ
SGSGYLEGDRRRPAGLPLRSSSPREWEERHVENGDMAGFGWGWLRSGRRR
RTCLEAGDKGDDVLKMKSMGSSIKSEDKVLTGGEDDMRRAMFDMDPDSDR
QGPMYFGTDGFDGPERLWDKPLEEIRFAECYVVFCIDREERPDEPKNFPF
WGVRQAVHREHLKWARVLARALENDTDREAAVLWDRTILSPSKYKTIGNI
MCVRAHSKEAAIRLLESDPFRAADLYETVSLYRYPYSTAGEFNWQLAAHP
YVALSMDREGQSRVREDNFPRHLEYLGNTKRCTGVGPIFDPSLDKDDPAS
APVGSLVFFNAATDEEARETVENDPLNEAGLFESMFIARFNDLDLSGLHL
AYPSRHDPLRDIIAKEGLAVEDDFPKDPDWRPFSNLTWLQAENDKRRDEE
YLEKRKEFYEQRDIRLEYNRTNKDAKFYHGVYVYVGRRNETEWYDYWPTY
LGPNDEWNTERFDLKNSYPPVDIYEDDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005545YCII
IPR011008Dimeric_a/b-barrel