prot_F-serratus_M_contig915.20556.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig915.20556.1
Unique Nameprot_F-serratus_M_contig915.20556.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length170
Homology
BLAST of mRNA_F-serratus_M_contig915.20556.1 vs. uniprot
Match: D7G5Q7_ECTSI (Tha4/Hcf106 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5Q7_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 1.220e-49
Identity = 107/173 (61.85%), Postives = 126/173 (72.83%), Query Frame = 0
Query:    1 MRVSVCACAAAMAVAARFAEAFVPALGGRAGLVRVGSLRTETSPSPVSASRPNNAFSRTYFGASGLSTSSRVAVGRPSS-STRTTMGLFGLGAPEIAVCLAVAAFILGPDKLAGVAKDFGKMAGELKDVPKEFQAGIIEGEANAAKTTM-IETE--AVVDAQPATKKEEEQTA 169
            M+++ C    A A+AAR AEAFVPAL GRAG++       + S SP +A R  NAFS T +G+   + SSR   GRPSS ++ TTMGLFGLGAPEIAVC+AVAA ILGPDK+AG AKD GKMAGELKDVPKEFQAG+ EGEA   KT   IE+   AV DA+PATKKEEE+ A
Sbjct:    1 MKLACCVLVWACALAARVAEAFVPALAGRAGIMSAAG--RQASMSPAAAGR-QNAFSHTSYGSPAQAQSSRWLSGRPSSGASTTTMGLFGLGAPEIAVCIAVAALILGPDKMAGFAKDMGKMAGELKDVPKEFQAGVEEGEAKTQKTIREIESNGLAVEDAEPATKKEEEEKA 170          
BLAST of mRNA_F-serratus_M_contig915.20556.1 vs. uniprot
Match: A0A1E7F4Y7_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F4Y7_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 2.450e-22
Identity = 49/72 (68.06%), Postives = 56/72 (77.78%), Query Frame = 0
Query:   84 TMGLFGLGAPEIAVCLAVAAFILGPDKLAGVAKDFGKMAGELKDVPKEFQAGIIEGEANAAKTTMIETEAVV 155
            TMGLFGLGAPE+ + L  AAF+LGPDKLA   KD GK+AGELK+VPKEFQAG+ EGEANA K  + E   VV
Sbjct:   62 TMGLFGLGAPEVGIILVAAAFLLGPDKLAEFGKDAGKIAGELKEVPKEFQAGMAEGEANAKKMKIAEEAEVV 133          
BLAST of mRNA_F-serratus_M_contig915.20556.1 vs. uniprot
Match: A0A7S4A8R7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A8R7_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 2.740e-21
Identity = 51/80 (63.75%), Postives = 60/80 (75.00%), Query Frame = 0
Query:   84 TMGLFGLGAPEIAVCLAVAAFILGPDKLAGVAKDFGKMAGELKDVPKEFQAGIIEGEANA-AKTTMIETEAVVDAQPATK 162
            TMGLFGLGAPE+ + L  AAF+LGPDKLA + KD GK+AGELK+VPKEFQAG+ EGEA+A A     E EA V  +  TK
Sbjct:   63 TMGLFGLGAPEVGIILVAAAFLLGPDKLASLGKDAGKIAGELKEVPKEFQAGLAEGEASAKAMKDKQEAEAAVIVEKETK 142          
BLAST of mRNA_F-serratus_M_contig915.20556.1 vs. uniprot
Match: A0A448ZFG6_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZFG6_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 5.050e-21
Identity = 45/60 (75.00%), Postives = 52/60 (86.67%), Query Frame = 0
Query:   84 TMGLFGLGAPEIAVCLAVAAFILGPDKLAGVAKDFGKMAGELKDVPKEFQAGIIEGEANA 143
            TMGLFGLGAPEI + L  AAF+LGPDKLA + KD GK+AGELK+VPKEFQAG+ EGEA+A
Sbjct:   60 TMGLFGLGAPEIGIVLVAAAFLLGPDKLASLGKDAGKIAGELKEVPKEFQAGMAEGEASA 119          
BLAST of mRNA_F-serratus_M_contig915.20556.1 vs. uniprot
Match: A0A7S2K8J1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K8J1_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 2.060e-20
Identity = 56/88 (63.64%), Postives = 64/88 (72.73%), Query Frame = 0
Query:   69 SSRVAVGRP---SSSTRTTM--GLFGLGAPEIAVCLAVAAFILGPDKLAGVAKDFGKMAGELKDVPKEFQAGIIEGEANA----AKTT 147
            S+ V VG P   ++S R T   GLFGLG PEIA+ L  AAF+LGP+KLA + KD GKMAGELK+VPKEFQAGI EGE NA    AKTT
Sbjct:   69 SNSVVVGAPRTCAASQRQTQLHGLFGLGGPEIAIILVAAAFLLGPEKLAELGKDAGKMAGELKEVPKEFQAGIEEGEKNAKAMKAKTT 156          
BLAST of mRNA_F-serratus_M_contig915.20556.1 vs. uniprot
Match: A0A835YSI8_9STRA (Tha4/Hcf106 protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSI8_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 3.230e-20
Identity = 49/77 (63.64%), Postives = 57/77 (74.03%), Query Frame = 0
Query:   66 LSTSSRVAVGRPSSSTRTTMGLFGLGAPEIAVCLAVAAFILGPDKLAGVAKDFGKMAGELKDVPKEFQAGIIEGEAN 142
            L+ SS   +    S    +MGLFGLGAPEIAV + VAA +LGP+KL   AKD GKMAGELK+VPKEFQAGI EGEA+
Sbjct:   49 LAPSSHARLTTRPSRASVSMGLFGLGAPEIAVIIVVAALVLGPEKLTSFAKDAGKMAGELKEVPKEFQAGIDEGEAS 125          
BLAST of mRNA_F-serratus_M_contig915.20556.1 vs. uniprot
Match: A0A7S2SMJ0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SMJ0_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 4.170e-20
Identity = 46/72 (63.89%), Postives = 54/72 (75.00%), Query Frame = 0
Query:   72 VAVGRPSSSTRTTMGLFGLGAPEIAVCLAVAAFILGPDKLAGVAKDFGKMAGELKDVPKEFQAGIIEGEANA 143
               G P+ S   TMGLFGLGAPEIAV + VA F+LGP KLA +A+D GK+AGELKDVP+EFQ G+ EGE  A
Sbjct:   86 AVAGAPARSQVVTMGLFGLGAPEIAVIVGVAGFVLGPQKLAEMARDMGKVAGELKDVPREFQEGLSEGEKEA 157          
BLAST of mRNA_F-serratus_M_contig915.20556.1 vs. uniprot
Match: A0A7S2XUZ2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUZ2_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 3.870e-19
Identity = 47/73 (64.38%), Postives = 55/73 (75.34%), Query Frame = 0
Query:   85 MGLFGLGAPEIAVCLAVAAFILGPDKLAGVAKDFGKMAGELKDVPKEFQAGIIEG-EANAAKTTMIETEAVVD 156
            MGLFGLGAPEIAVC+ VAA +LGPDKL   A+D GKMAGELK+VPKEFQ G+ EG EA   +   I+ EA  +
Sbjct:   67 MGLFGLGAPEIAVCVIVAALVLGPDKLISSARDVGKMAGELKEVPKEFQKGLEEGKEAARLEMAQIKEEATAE 139          
BLAST of mRNA_F-serratus_M_contig915.20556.1 vs. uniprot
Match: A0A8J2SN64_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SN64_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 7.140e-19
Identity = 43/61 (70.49%), Postives = 50/61 (81.97%), Query Frame = 0
Query:   84 TMGLFGLGAPEIAVCLAVAAFILGPDKLAGVAKDFGKMAGELKDVPKEFQAGIIEGEANAA 144
            T  LFGLGAPE+ V L + AF+LGPDKLA +AKDFGK+AGELKDVPKEF+ G+ EGEA  A
Sbjct:   71 TNSLFGLGAPELVVILGLGAFVLGPDKLASMAKDFGKVAGELKDVPKEFKEGLEEGEAAKA 131          
BLAST of mRNA_F-serratus_M_contig915.20556.1 vs. uniprot
Match: A0A6V1V9D4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1V9D4_HETAK)

HSP 1 Score: 87.0 bits (214), Expect = 1.200e-18
Identity = 44/59 (74.58%), Postives = 49/59 (83.05%), Query Frame = 0
Query:   85 MGLFGLGAPEIAVCLAVAAFILGPDKLAGVAKDFGKMAGELKDVPKEFQAGIIEGEANA 143
            M LFGL APE+ VCLAVAA ILGPDKL G AKD GK+AGELK+VPKEFQAG+ EG+  A
Sbjct:   71 MQLFGLSAPELLVCLAVAALILGPDKLIGSAKDLGKIAGELKEVPKEFQAGMEEGKEKA 129          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig915.20556.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5Q7_ECTSI1.220e-4961.85Tha4/Hcf106 protein n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A1E7F4Y7_9STRA2.450e-2268.06Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S4A8R7_9STRA2.740e-2163.75Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A448ZFG6_9STRA5.050e-2175.00Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2K8J1_9STRA2.060e-2063.64Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A835YSI8_9STRA3.230e-2063.64Tha4/Hcf106 protein n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S2SMJ0_9STRA4.170e-2063.89Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2XUZ2_9STRA3.870e-1964.38Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A8J2SN64_9STRA7.140e-1970.49Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6V1V9D4_HETAK1.200e-1874.58Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003369Sec-independent protein translocase protein TatA/B/EPFAMPF02416MttA_Hcf106coord: 90..135
e-value: 1.6E-5
score: 24.2
NoneNo IPR availablePANTHERPTHR33162FAMILY NOT NAMEDcoord: 37..141
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 107..169
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 85..106
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..84
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.554
NoneNo IPR availableTMHMMTMhelixcoord: 86..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig915contigF-serratus_M_contig915:123323..124963 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig915.20556.1mRNA_F-serratus_M_contig915.20556.1Fucus serratus malemRNAF-serratus_M_contig915 123323..124963 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig915.20556.1 ID=prot_F-serratus_M_contig915.20556.1|Name=mRNA_F-serratus_M_contig915.20556.1|organism=Fucus serratus male|type=polypeptide|length=170bp
MRVSVCACAAAMAVAARFAEAFVPALGGRAGLVRVGSLRTETSPSPVSAS
RPNNAFSRTYFGASGLSTSSRVAVGRPSSSTRTTMGLFGLGAPEIAVCLA
VAAFILGPDKLAGVAKDFGKMAGELKDVPKEFQAGIIEGEANAAKTTMIE
TEAVVDAQPATKKEEEQTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003369TatA/B/E