prot_F-serratus_M_contig91.20529.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig91.20529.1
Unique Nameprot_F-serratus_M_contig91.20529.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length623
Homology
BLAST of mRNA_F-serratus_M_contig91.20529.1 vs. uniprot
Match: D7FNN0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNN0_ECTSI)

HSP 1 Score: 651 bits (1679), Expect = 2.930e-225
Identity = 360/704 (51.14%), Postives = 458/704 (65.06%), Query Frame = 0
Query:    1 MNITRENFEDNFDTVCKAIRASHFVAVDAEFTGLRAPGMPKERMTDSVKARYRIARASCSKFMVTQYGLCCFRFDEGGRLEARPFNAFITPSTYFGMDRIYSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSEEALIKEKIEARWLREAAAAAMEATHVSTEEP------------APAQPAVVATRDGTTLESLGEEERNMILDARKKVETLLNEVSGEGNYVERSVKLDPMNRRQRWLIYEFVGANPA-VKLSNLDGPHFARGIQIRTVSKD-PKIEALAQAKIREDAKERQMEDLRRAVGFRRVIDEIAESGKPVITHNGLLDLFHTYDKFVGPIPVNFEEGTRAMHAFLPRLLDSKVIMNKAIAEGFALPCTTLGDAFRWLRENYSS---------------------ATTGSSTVPGMTVDEAVENTGAEGVDK----------------PCVE------------EDNKRRLQAWDALFAPGFEKRYTDNAQEHEAGYDAYLTGCCFVAAATLGLGVGVKEIKDVSLEGVIPTTLAPVSNSVPLYRVLGGQRMCLPGPTPPPDFSRYLHVSGFPPAAKTDAVMRPLKAVSGCEGTWFHWIDDTSGVAEISTAEAAQALLQAAVSASA----------NADTSVSAKKAEAVDPTQLGLGDMKVVQLSCSIL--------EVDEEDGDE--KRSTKRIR 621
            MNIT+ENFE +FD +C+AIR+SHF+A+D EFTGLR PG  +E+M DSV+ARY +AR SCS+FM+TQYG+CCFR+ +  RLEARPFN F+ PSTY G DR+YSCQASSM+FLS HGFDFQAW +HGVPFLSR+EE +++ K+  RW REA  AA     V+                A  +  V   RDGTT+ESL E E+ M+ DA KKVE LL E S  G YV++SVKL+PMN RQRWL+YEFVG++ A VKLSNL GP +AR ++IRTV KD P+  A  +AK+R D + RQ+ DLRRAVGFRRV+DEI+++GKPVI HNGLLDL HT+DKFVGPIPV+ ++GTRA+H+ LPRL DSKV+M KA+A G  LP T LG+A +WLRE Y +                     A      V G  V        A G  K                P VE            E  +R  + WDA+ APGFE+RY D  +EHEAG+DAYLTGCCF AAAT+GLGVG+ E+K ++     P  L    N +PLY+V+GGQ++CLPGP P  D SRY+HVSGFP AA+TDAV+  +KAV GC  +WFHW+DDTSGV + ++AE A+ALL+AA +                 +      E  DP +L LGD+K+VQ+  ++L        E +E++G E   R  KR+R
Sbjct:    1 MNITKENFEQSFDVICEAIRSSHFIALDTEFTGLRLPGAAREKMMDSVQARYDLARGSCSQFMLTQYGICCFRYHDE-RLEARPFNCFVVPSTYHGSDRVYSCQASSMDFLSKHGFDFQAWASHGVPFLSRAEEEVVEGKLRRRWEREATVAAERKEAVAXXXXXXXXXXXXXXXAAAVEGPVHTARDGTTIESLQEPEKGMVKDALKKVEALLAESSSGGEYVQKSVKLEPMNGRQRWLMYEFVGSSTADVKLSNLPGPAYARPMEIRTVCKDDPEKHAEEEAKLRADEQARQLGDLRRAVGFRRVVDEISKAGKPVICHNGLLDLLHTHDKFVGPIPVDMDDGTRALHSLLPRLFDSKVVMAKAMAAGMKLPRTVLGEAHQWLREKYPAPXXXXXXLEEGAEAGMEPAEGAAEEGQQVDGTAVVATTSGGEANGDSKTNGEGXXXXXXXXXAVPPVEAGAEAAASERDVEALERARRGWDAVLAPGFEERYKDGGREHEAGFDAYLTGCCFAAAATVGLGVGLDELKRMASGEETPAALGSAQNVLPLYKVVGGQQVCLPGPAPKVDLSRYVHVSGFPSAARTDAVLASIKAVDGCVDSWFHWMDDTSGVVDCTSAEGAEALLRAAAAXXXXXXXXXXXXXGTPAAGDGGSGEEADPCRLSLGDLKLVQMEHALLNGGGRGAPEAEEQEGGEGTARGAKRLR 703          
BLAST of mRNA_F-serratus_M_contig91.20529.1 vs. uniprot
Match: W5U5L5_ICTPU (Poly(A)-specific ribonuclease PARN n=5 Tax=Siluroidei TaxID=1489793 RepID=W5U5L5_ICTPU)

HSP 1 Score: 190 bits (482), Expect = 1.320e-48
Identity = 164/573 (28.62%), Postives = 262/573 (45.72%), Query Frame = 0
Query:    1 MNITRENFEDNFDTVCKAIRASHFVAVDAEFTGLRAPGMPKERMT---DSVKARYRIARASCSKFMVTQYGLCCFRFDEG-GRLEARPFNAFITPSTYF--GMDRIYSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSEEALIKEKIEARWLREAAAAAMEATHVSTEEPAPAQPAVVATRDGTTLESLGEEERNMILDARKKVETLLNEVSGEGNYVERSVKLDPMNRRQRWLIYEFVGANPAVKLSNLDGPHFARGIQIRTVSKDPKIEALAQAKIREDAK--------ERQMEDLRRAVGFRRVIDEIAESGKPVITHNGLLDLFHTYDKFVGPIPVNFEEGTRAMHAFLPRLLDSKVIMNKAIAEGFALPCTTLGDAFRWLRENYSSATTGSSTVPGMTVDEAVENTGAEGVDKPCVEEDNKRRLQAWDALFAPGFEKRYTDNAQEHEAGYDAYLTGCCFVAAATLGLGVGVKEIKDVSLEGVIPTTLAPVSNSVPLYRVLGGQRMCLPGPTPPPDFSRYLHVSGFPPAAKTDAVMRPLKAVSGCEGTWFHWIDDTSGVAEISTAEAAQ 559
            M +TR++F+D    V  A++ + F+A+D EF+GL + G     +T   D+ + RY   R     F++ Q+GLC FR+D+   R   + FN +I P  +     D  + CQ+SS++FL++ GFDF     +G+P+L++ EE+ ++E+ E R          ++  V T       P+ ++        ++ EE ++ I    +KVE LLN         E++V L+P +  QR LIY+ +               F +G+ I TV  D K   +  +K+ E+ +        ER+ E+L  AVGF RVI  I++SGK V+ HN LLD+ HT  +F  P+P   ++         PRLLD+K++                                 +ST P     E + NT    ++K   E    +  +A     + GF+   T + Q HEAGYDAY+TG CF++ A             +S    +   + P  N + L RV     + + GP   P     L+V+ FP   KT  + +   A    +     W+DDTS    +S  E  Q
Sbjct:    1 MEVTRQSFKDTLSVVYSAVQEADFLAIDGEFSGL-SDGPAVSMLTNGMDTPEERYSKLRKHSMDFLLFQFGLCTFRYDQSQSRYFTKAFNFYIFPKPFSRASPDIKFICQSSSIDFLASQGFDFNKVFRNGIPYLNQGEESQLREQYEER--------RNQSNGVGT-------PSYISPTSCKGPMNIPEEHKDFINRVVEKVEALLNNS-------EKTVDLEPCSGFQRKLIYQTLNWK------------FPKGLHIETVENDKKERFIQISKVDEEERKRIEQQKHEREQEELNDAVGFSRVIHTISKSGKLVVGHNMLLDVMHTIHQFYCPLPEELDDFKEVTMCVFPRLLDTKLM---------------------------------ASTQPFK---ELITNTSLAELEKQLKE----KPFKAPRVACSEGFQSYDTASEQLHEAGYDAYITGLCFISMANYLGSFLTPPRAHISARSKL---IEPFYNKLFLMRVADIPYLNISGPDLQPKRDNVLYVT-FPKEWKTSDLYQLFSAFGNIQ---VSWVDDTSAFVSLSQLEQVQ 491          
BLAST of mRNA_F-serratus_M_contig91.20529.1 vs. uniprot
Match: I3IUA3_ORENI (Poly(A)-specific ribonuclease PARN n=19 Tax=Percomorphaceae TaxID=1489872 RepID=I3IUA3_ORENI)

HSP 1 Score: 190 bits (482), Expect = 1.790e-48
Identity = 168/574 (29.27%), Postives = 265/574 (46.17%), Query Frame = 0
Query:    1 MNITRENFEDNFDTVCKAIRASHFVAVDAEFTGLRAPGMPKERMT---DSVKARYRIARASCSKFMVTQYGLCCFRFDEG-GRLEARPFNAFITPSTY--FGMDRIYSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSEEALIKEKIEARWLREAAAAAMEATHVSTEEPAPAQPAVVATRDGTTLESLGEEERNMILDARKKVETLLNEVSGEGNYVERSVKLDPMNRRQRWLIYEFVGANPAVKLSNLDGPHFARGIQIRTVSKDPKIEALAQAKIREDAK--------ERQMEDLRRAVGFRRVIDEIAESGKPVITHNGLLDLFHTYDKFVGPIPVNFEEGTRAMHAFLPRLLDSKVIMNKAIAEGFALPCTTLGDAFRWLRENYSSATTGSSTVPGMTVDEAVENTGAEGVDKPCVEEDNKRRLQAWDALFAPGFEKRYTDNAQEHEAGYDAYLTGCCFVAAATLGLGVGVKEIKD-VSLEGVIPTTLAPVSNSVPLYRVLGGQRMCLPGPTPPPDFSRYLHVSGFPPAAKTDAVMRPLKAVSGCEGTWFHWIDDTSGVAEISTAEAAQ 559
            M +TR+N++D  +TV  AI  + F+A+D EF+G+ + G     +T   D+ + RY   +     F++ Q+GLC F++D+   +   +PFN +I P  +     D  + CQ+SS++FL++ GFDF     HG+P+L++ EEA ++E+ E R  + A         V T       P+ ++         + EE ++ I    +KVE LL      GN  E+++ L+P    QR LIY+ +               F +G+ + TV  + K   +  +K+ E+ +        ER+ E+L  AVGF RVI  I++SGK V+ HN LLD+ HT  +F  P+P + ++         PRLLD+K++                                 +ST P     E + NT    ++K   E   K          A GF    T   Q HEAGYDAY+TG CF+A A   LG  +   K  +S    +   + P  N + L R++    + + GP   P     L+V+ FP   KT  + +   A    +     WIDDTS    +S  +  Q
Sbjct:    1 MEVTRKNYKDCLNTVYSAIEEADFLAIDGEFSGI-SDGPNVSALTNGLDTPEERYTKLKKHSMDFLLFQFGLCTFKYDQAKSKYITKPFNFYIFPKPFNRTSPDIKFICQSSSIDFLASQGFDFNKVFCHGIPYLNQEEEAQLREQTEERRNQHA-------NGVGT-------PSFISPSSSKGSSHVPEEHKDFINKVVEKVEALL------GNS-EKTLDLEPCTGFQRKLIYQTLNWK------------FPKGLHVETVETEKKERYIQISKVDEEERKRREQQKLEREQEELNDAVGFSRVIHAISKSGKLVVGHNMLLDVMHTIHQFYCPLPEDLQDFKEVTMCVFPRLLDTKLM---------------------------------ASTQPFK---ELITNTSLAELEKQLKESPFKSPQ----VETAEGFPSYDTAQEQLHEAGYDAYITGLCFIAMANY-LGSFLTPPKAYISARSKL---IEPFFNKLFLMRIIDIPYLNITGPDLQPKRDHVLYVT-FPKEWKTSDLYQLFSAFGNIQ---VSWIDDTSAFVSLSQTDQVQ 492          
BLAST of mRNA_F-serratus_M_contig91.20529.1 vs. uniprot
Match: UPI00145B1E7A (poly(A)-specific ribonuclease PARN n=2 Tax=Oxudercinae TaxID=497678 RepID=UPI00145B1E7A)

HSP 1 Score: 189 bits (481), Expect = 2.610e-48
Identity = 167/574 (29.09%), Postives = 266/574 (46.34%), Query Frame = 0
Query:    1 MNITRENFEDNFDTVCKAIRASHFVAVDAEFTGLRAPGMPKERMT---DSVKARYRIARASCSKFMVTQYGLCCFRFDEG-GRLEARPFNAFITPSTY--FGMDRIYSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSEEALIKEKIEARWLREAAAAAMEATHVSTEEPAPAQPAVVATRDGTTLESLGEEERNMILDARKKVETLLNEVSGEGNYVERSVKLDPMNRRQRWLIYEFVGANPAVKLSNLDGPHFARGIQIRTVSKDPKIEALAQAKIREDAK--------ERQMEDLRRAVGFRRVIDEIAESGKPVITHNGLLDLFHTYDKFVGPIPVNFEEGTRAMHAFLPRLLDSKVIMNKAIAEGFALPCTTLGDAFRWLRENYSSATTGSSTVPGMTVDEAVENTGAEGVDKPCVEEDNKRRLQAWDALFAPGFEKRYTDNAQEHEAGYDAYLTGCCFVAAATLGLGVGVKEIKD-VSLEGVIPTTLAPVSNSVPLYRVLGGQRMCLPGPTPPPDFSRYLHVSGFPPAAKTDAVMRPLKAVSGCEGTWFHWIDDTSGVAEISTAEAAQ 559
            M +TR NF+++ DTV +AI  + F+A+D EF+G+ + G     +T   D+ + RY   +     F++ Q+GLC F++D+   +   +PFN +I P  +     D  + CQ+SS++FL++ GFDF     HG+P+L++ EE  ++E+ E R  + A         V T       P+ ++    ++   + +E ++ I    +KVE LL+         ++S+ LDP    QR L+Y+ +               F +GI I TV  + K   +  +K+ E+          E++ E+L  AVGF RVI  I++SGK V+ HN LLD+ HT  +F  P+P + +E         PRLLD+K++                                 SST P     E + NT    ++K   E   K        + A GF    T   Q HEAGYDAY+TG CF++ A   LG  +   K  +S    +   + P  N + L R++    + + GP   P     L+V+ FP   KT  + +   A    +     WIDDTS    +S  +  Q
Sbjct:    1 MELTRRNFKESLDTVYEAIEEADFLAIDGEFSGI-SDGPNVSALTNGLDTPEERYAKLKKHSMDFLLFQFGLCTFKYDQSQSKYITKPFNFYIFPKPFNRSSPDIKFICQSSSIDFLASQGFDFNKVFCHGIPYLNQEEEVQLREQTEERRNQHA-------NGVGT-------PSFISPSSKSSAH-VPDEHKDFINRVVQKVEALLSNS-------DKSLDLDPCTGFQRKLVYQTLNWK------------FPKGIHIETVETEKKERFIQVSKVDEEEXXXXXXXXVEKEQEELNDAVGFSRVIHAISKSGKLVVGHNMLLDVMHTIHQFYCPLPEDLQEFKEVTMCVFPRLLDTKLM---------------------------------SSTQPFK---ELITNTSLAELEKQLKESPFK----CPQVVTADGFPSYDTAQEQLHEAGYDAYITGLCFISMANY-LGSFLTPPKGHISARSKL---IEPFYNKLFLMRIIDIPYLNMTGPDLQPKRDHVLYVT-FPKEWKTSDLYQLFSAFGNIQ---VSWIDDTSAFVSLSQTDQVQ 491          
BLAST of mRNA_F-serratus_M_contig91.20529.1 vs. uniprot
Match: A0A3Q3A9J3_KRYMA (Poly(A)-specific ribonuclease PARN n=2 Tax=Kryptolebias marmoratus TaxID=37003 RepID=A0A3Q3A9J3_KRYMA)

HSP 1 Score: 187 bits (474), Expect = 2.220e-47
Identity = 160/573 (27.92%), Postives = 262/573 (45.72%), Query Frame = 0
Query:    1 MNITRENFEDNFDTVCKAIRASHFVAVDAEFTGLRAPGMPKERMT---DSVKARYRIARASCSKFMVTQYGLCCFRFDEG-GRLEARPFNAFITPSTY--FGMDRIYSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSEEALIKEKIEARWLREAAAAAMEATHVSTEEPAPAQPAVVATRDGTTLESLGEEERNMILDARKKVETLLNEVSGEGNYVERSVKLDPMNRRQRWLIYEFVGANPAVKLSNLDGPHFARGIQIRTVSKDPKIEALAQAKIREDAK--------ERQMEDLRRAVGFRRVIDEIAESGKPVITHNGLLDLFHTYDKFVGPIPVNFEEGTRAMHAFLPRLLDSKVIMNKAIAEGFALPCTTLGDAFRWLRENYSSATTGSSTVPGMTVDEAVENTGAEGVDKPCVEEDNKRRLQAWDALFAPGFEKRYTDNAQEHEAGYDAYLTGCCFVAAATLGLGVGVKEIKDVSLEGVIPTTLAPVSNSVPLYRVLGGQRMCLPGPTPPPDFSRYLHVSGFPPAAKTDAVMRPLKAVSGCEGTWFHWIDDTSGVAEISTAEAAQ 559
            M +TR+NF+D+  TVC AI  + F+A+D EF+G+ + G     +T   D+ + RY   +     F++ Q+GLC F++D+   +   +PFN ++ P  +     D  + CQ+SS++FL++ GFDF     HG+P+L++ EEA ++E+ E R  + A         + T       P+ ++         + +E+++ +    +KVE L +         E+++ L+P    QR L+Y+ +               F +G+ + T+  + K   +  +K+ E+ K        ER+ E+L  AVGF RVI  I++S K V+ HN LLD+ HT  +F  P+P + ++         PRLLD+K++                                 +ST P     E + NT    ++K   E   K          A GF    T   Q HEAGYDAY+TG CF++ A   LG  +   K  S        + P  N + L R++    + + GP   P     L+V+ FP   KT  + +   A    +     WIDDTS    +S  +  Q
Sbjct:    1 MEVTRKNFKDSLSTVCSAIDEADFLAIDGEFSGI-SDGPNVSALTNGLDTPEERYTKLKKHSMDFLMFQFGLCTFKYDQTKSKYITKPFNFYVFPKPFNRTSPDIKFICQSSSIDFLASQGFDFNKVFCHGIPYLNQEEEAQLREQTEERRNQHA-------NGLGT-------PSFISPSSSKVPAHVPDEQKDFVNKVVEKVEALFSNN-------EKTLDLEPCTGFQRKLVYQTLSWK------------FPKGLHVETLETEKKERYIQVSKVDEEEKKKRXXXXLEREQEELNDAVGFSRVIHAISKSSKLVVGHNMLLDVMHTIHQFYCPLPEDLQDFKDVTMCVFPRLLDTKLM---------------------------------ASTQPFK---ELISNTSLAELEKQVKESPFKPPK----VETAEGFPSYDTAQEQLHEAGYDAYITGLCFISMAN-HLGSFLTPPK--SYISARSKLIEPFFNKLFLMRIIDIPYLNITGPDLQPKRDHVLYVT-FPKEWKTSDLYQLFSAFGNIQ---VSWIDDTSAFVSLSQTDQVQ 492          
BLAST of mRNA_F-serratus_M_contig91.20529.1 vs. uniprot
Match: A0A3Q1AR66_AMPOC (Poly(A)-specific ribonuclease PARN n=3 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3Q1AR66_AMPOC)

HSP 1 Score: 187 bits (474), Expect = 2.420e-47
Identity = 162/574 (28.22%), Postives = 268/574 (46.69%), Query Frame = 0
Query:    1 MNITRENFEDNFDTVCKAIRASHFVAVDAEFTGLRAPGMPKERMT---DSVKARYRIARASCSKFMVTQYGLCCFRFDEG-GRLEARPFNAFITPSTY--FGMDRIYSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSEEALIKEKIEARWLREAAAAAMEATHVSTEEPAPAQPAVVATRDGTTLESLGEEERNMILDARKKVETLLNEVSGEGNYVERSVKLDPMNRRQRWLIYEFVGANPAVKLSNLDGPHFARGIQIRTVSKDPKIEALAQAKIREDAK--------ERQMEDLRRAVGFRRVIDEIAESGKPVITHNGLLDLFHTYDKFVGPIPVNFEEGTRAMHAFLPRLLDSKVIMNKAIAEGFALPCTTLGDAFRWLRENYSSATTGSSTVPGMTVDEAVENTGAEGVDKPCVEEDNKRRLQAWDALFAPGFEKRYTDNAQEHEAGYDAYLTGCCFVAAATLGLGVGVKEIKD-VSLEGVIPTTLAPVSNSVPLYRVLGGQRMCLPGPTPPPDFSRYLHVSGFPPAAKTDAVMRPLKAVSGCEGTWFHWIDDTSGVAEISTAEAAQ 559
            M +TR+N++D+  TV  AI  + F+A+D EF+G+ + G     +T   D+ + RY   +     F++ Q+GLC F++D+   +   +PFN +I P  +     D  + CQ+SS++FL++ GFDF     HG+P+L++ EEA ++E+ E R  ++A         V T       P+ ++         + EE ++ I    +KVE L +         E+++ LDP    QR LIY+ +               F +G+ + TV  + K   +  +K+ E+ +        ER+ E+L  AVGF RVI  I++SGK V+ HN LLD+ HT  +F  P+P + ++         PRLLD+K++ +    +   +  T+L +  + L+EN   +                          P VE     R  ++D           T   Q HEAGYDAY+TG CF++ A   LG  +   K  +S    +   + P  N + L R++    + + GP   P     L+V+ FP   KT  + +   A    +     W+DDTS    +S  +  Q
Sbjct:    1 MEVTRKNYKDSLSTVYSAIEEADFLAIDGEFSGI-SDGPNVSALTNGLDTPEERYTKLKKHSMDFLLFQFGLCTFKYDQTKSKYITKPFNFYIFPKPFNRTSPDIKFICQSSSIDFLASQGFDFNKVFCHGIPYLNQEEEAQLREQTEERRNQQA-------NGVGT-------PSFISPSSSKGPAHVPEEHKDFINRVVEKVEALFSNS-------EKTLDLDPCTGFQRKLIYQTLNWK------------FPKGLHVETVETEKKERYIQVSKVDEEERKRREQQKLEREQEELNDAVGFSRVIHAISKSGKLVVGHNMLLDVMHTIHQFYCPLPEDLQDFKEVTMCVFPRLLDTKLMASTQPFKEL-ITNTSLAELEKQLKENPFKS--------------------------PQVE--TTERFPSYD-----------TAQEQLHEAGYDAYITGLCFISMANY-LGSFLTPPKAYISARSKL---IEPFFNKLFLMRIIDIPYLNITGPDLQPKRDHVLYVT-FPKEWKTSDLYQLFSAFGNIQ---VSWVDDTSAFVSLSQTDQVQ 492          
BLAST of mRNA_F-serratus_M_contig91.20529.1 vs. uniprot
Match: A0A3P9C7U1_9CICH (Poly(A)-specific ribonuclease PARN n=6 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3P9C7U1_9CICH)

HSP 1 Score: 186 bits (472), Expect = 3.820e-47
Identity = 165/574 (28.75%), Postives = 265/574 (46.17%), Query Frame = 0
Query:    1 MNITRENFEDNFDTVCKAIRASHFVAVDAEFTGLRAPGMPKERMT---DSVKARYRIARASCSKFMVTQYGLCCFRFDEG-GRLEARPFNAFITPSTY--FGMDRIYSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSEEALIKEKIEARWLREAAAAAMEATHVSTEEPAPAQPAVVATRDGTTLESLGEEERNMILDARKKVETLLNEVSGEGNYVERSVKLDPMNRRQRWLIYEFVGANPAVKLSNLDGPHFARGIQIRTVSKDPKIEALAQAKIREDAK--------ERQMEDLRRAVGFRRVIDEIAESGKPVITHNGLLDLFHTYDKFVGPIPVNFEEGTRAMHAFLPRLLDSKVIMNKAIAEGFALPCTTLGDAFRWLRENYSSATTGSSTVPGMTVDEAVENTGAEGVDKPCVEEDNKRRLQAWDALFAPGFEKRYTDNAQEHEAGYDAYLTGCCFVAAATLGLGVGVKEIKD-VSLEGVIPTTLAPVSNSVPLYRVLGGQRMCLPGPTPPPDFSRYLHVSGFPPAAKTDAVMRPLKAVSGCEGTWFHWIDDTSGVAEISTAEAAQ 559
            M +TR+N++D  +TV  AI  + F+A+D EF+G+ + G     +T   D+ + RY   +     F++ Q+GLC F++D+   +   +PFN +I P  +     D  + CQ+SS++FL++ GFDF     HG+P+L++ EEA ++E+ E R  + A         V T       P+ ++         + EE ++ I    +KVE L+  V+ E     +++ L+P    QR LIY+ +               F +G+ + TV  + K   +  +K+ E+ +        E++ E+L  AVGF RVI  I++SGK V+ HN LLD+ HT  +F  P+P + ++         PRLLD+K++                                 +ST P     E + NT    ++K   E   K          A GF    T   Q HEAGYDAY+TG CF+A A   LG  +   K  +S    +   + P  N + L R++    + + GP   P     L+V+ FP   KT  + +   A    +     WIDDTS    +S  +  Q
Sbjct:    1 MEVTRKNYKDCLNTVYSAIEEADFLAIDGEFSGI-SDGPNVSALTNGLDTPEERYTKLKKHSMDFLLFQFGLCTFKYDQAKSKYITKPFNFYIFPKPFNRTSPDIKFICQSSSIDFLASQGFDFNKVFCHGIPYLNQEEEAQLREQTEERRNQHA-------NGVGT-------PSFISPSSSKGSSHVPEEHKDFINKVVEKVEALM--VNSE-----KTLDLEPCTGFQRKLIYQTLNWK------------FPKGLHVETVETEKKERYIQISKVDEEERKXXXXXKLEKEQEELNDAVGFSRVIHAISKSGKLVVGHNMLLDVMHTIHQFYCPLPEDIQDFKEVTMCVFPRLLDTKLM---------------------------------ASTQPFK---ELITNTSLAELEKQLKESPFKSPQ----VETAEGFPSYDTAQEQLHEAGYDAYITGLCFIAMANY-LGSFLTPPKAYISARSKL---IEPFFNKLFLMRIIDIPYLNITGPDLQPKRDHVLYVT-FPKEWKTSDLYQLFSAFGNIQ---VSWIDDTSAFVSLSQTDQVQ 492          
BLAST of mRNA_F-serratus_M_contig91.20529.1 vs. uniprot
Match: UPI001458A437 (poly(A)-specific ribonuclease PARN-like isoform X1 n=3 Tax=Pecten maximus TaxID=6579 RepID=UPI001458A437)

HSP 1 Score: 184 bits (468), Expect = 5.630e-47
Identity = 166/577 (28.77%), Postives = 263/577 (45.58%), Query Frame = 0
Query:    1 MNITRENFEDNFDTVCKAIRASHFVAVDAEFTGLRAPGMPKERMTDSVKARYRIARASCSKFMVTQYGLCCFRFDEGGRL-EARPFNAFITPSTYF--GMDRIYSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSEEALIKEKIEARWLREAAAAAMEATHVSTEEPAPAQPAVVATRDGTTLESLGEEERNMILDARKKVETLLNEVSGEGNYVERSVKLDPMNRRQRWLIYEFVGANPAVKLSNLDGPHFARGIQIRTVSKDPKIEALAQAKIR--EDAKERQME-------DLRRAVGFRRVIDEIAESGKPVITHNGLLDLFHTYDKFVGPIPVNFEEGTRAMHAFLPRLLDSKVIMNKAIAEGFALPCTTLGDAFRWLRENYSSATTGSSTVPGMTVDEAVENTGAEGVDKPCVEEDNKRRLQAWDALFAPGFEKRYTDNAQEHEAGYDAYLTGCCFVAAATLGLGVGVKEIKDVSLEGVIPTT--LAPVSNSVPLYRVLGGQRMCLPGPTPPPDFSRYLHVSGFPPAAKTDAVMRPLKAVSGCEGTWFHWIDDTSGVAEISTAEAAQALLQ 563
            M ITR+NF+   + V ++I ++ F+AVD EFTGL +         D+ + RY+  R     F++ Q+G+C F +DE   L EARPFN ++ P  Y   G D  + CQ+SS+EFL++ GFDF      G+ +L+  +EA ++E ++ +  +                PA   P  V+        S+ +E++  I +  +KV   + +++      E  + L   N  QR LIY+ + A             F  GI + T + + K   +   +I+  ED K R+ E       DL  AVGF +VI  I++SGK V+ HN +LDL H   +F  P+P ++EE      +  P++LD+K++ + +  +   +  T L D                       + + +EN       KP          Q      A  F K  T+    HEAGYDAYLTG CF+  +   LG      +D+    V P++  + P +N + L RV     + L G    P+     H++ FP   KT  ++       G +     W++DTS  A +   E AQ  LQ
Sbjct:    1 MEITRKNFKQRLNFVTESINSADFLAVDGEFTGLDSNNGGHAMPFDTPEVRYQRVRQGACDFLLLQFGICTFHYDEAKMLYEARPFNFYLFPRPYSRTGPDIRFMCQSSSIEFLASQGFDFNKAFKDGISYLTPGDEANLREALQQKHQQ----------FSQFSSPAFVTPDGVSQGTSKGPVSIPDEQKEFIKEICEKVSDFIEKLT------EDKLSLPSCNGFQRKLIYQSLRAQ------------FPSGIHLETQTGEKKERHIVVTRIKSEEDMKRREAEKQAAEVADLDNAVGFTKVIRAISQSGKLVVGHNMMLDLIHILHQFFYPLPESYEEFKDMCMSAFPKMLDTKLMASTSPFKD-RIMSTVLAD-----------------------LQKILEN-------KP---------FQKAQVEIAEKFSKYTTEKGPLHEAGYDAYLTGICFICMSNF-LGTFQNPSQDI----VPPSSPLVQPFTNKLFLMRVYDIPYLNLGGQDLTPNRDHVFHLT-FPKEWKTSDIVHLFSPFGGSQ---IFWLNDTSAFASLHFKEDAQKALQ 500          
BLAST of mRNA_F-serratus_M_contig91.20529.1 vs. uniprot
Match: PARN_XENLA (Poly(A)-specific ribonuclease PARN n=12 Tax=Xenopus TaxID=8353 RepID=PARN_XENLA)

HSP 1 Score: 184 bits (468), Expect = 7.850e-47
Identity = 164/574 (28.57%), Postives = 260/574 (45.30%), Query Frame = 0
Query:    1 MNITRENFEDNFDTVCKAIRASHFVAVDAEFTGLRAPGMPKERMT---DSVKARYRIARASCSKFMVTQYGLCCFRFDEG-GRLEARPFNAFITPSTYF--GMDRIYSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSEEALIKEKIEARWLREAAAAAMEATHVSTEEPAPAQPAVVATRDGTTLESLGEEERNMILDARKKVETLLNEVSGEGNYVERSVKLDPMNRRQRWLIYEFVGANPAVKLSNLDGPHFARGIQIRTVSKDPKIEALAQAKIREDAKER--------QMEDLRRAVGFRRVIDEIAESGKPVITHNGLLDLFHTYDKFVGPIPVNFEEGTRAMHAFLPRLLDSKVIMNKAIAEGFALPCTTLGDAFRWLRENYSSATTGSSTVPGMTVDEAVENTGAEGVDKPCVEEDNKRRLQAWDALFAPGFEKRYTDNAQEHEAGYDAYLTGCCFVAAATLGLGVGVKEIKD-VSLEGVIPTTLAPVSNSVPLYRVLGGQRMCLPGPTPPPDFSRYLHVSGFPPAAKTDAVMRPLKAVSGCEGTWFHWIDDTSGVAEISTAEAAQ 559
            M ITR NF+D    V KAI  + F+A+D EF+G+ + G     +T   D+ + RY   +    +F++ Q+GLC F +D    +   + FN +I P  +     D+ + CQ+SS++FL+N GFDF     +G+P+L++ EE +++++ E R  +   A+ M               + ++     T  S+ +E++  I    ++VE  L          ++S+ ++P    QR LIY+ +               + RGI + TV  + K   +  +K+ E+ ++R        + E+L  AVGF R+I  I+ SGK V+ HN LLD+ HT  +F   +P    E     +   PR+LD+K++                                 +ST P     E + NT    ++K   E   K          A GF+   T + Q HEAGYDAY+TG CF++ A   LG  +   KD VS    I   + P  N + L R++    + L GP   P     LHV+ FP   KT  + +   A    +     WIDDTS    +S  E  Q
Sbjct:    1 MEITRSNFKDTLPKVYKAIEEADFLAIDGEFSGI-SDGPSVSTLTNGFDTPEERYTKLKKHSMEFLLFQFGLCTFNYDNTEAKYLMKSFNFYIFPKPFNRNSPDKKFVCQSSSIDFLANQGFDFNKVFRNGIPYLNQEEERVLRDQYEDRRSQSNGASTM---------------SYISPNSSKTPVSIPDEQKGFIDKVVERVEDFLKNE-------QKSMNVEPCTGYQRKLIYQTLNWK------------YPRGIHVETVESEKKERYIVISKVDEEERKRMEQQKQAKEREELDDAVGFSRIIQAISSSGKLVVGHNMLLDVMHTIHQFFCQLPDELNEFKEVTNCVFPRVLDTKLM---------------------------------ASTNPFK---EIIYNTSLAELEKRLKEAPFKPPK----VDSAEGFQSYNTASEQLHEAGYDAYITGLCFISMANY-LGSFLSPPKDYVSCRSKI---VRPFFNKLFLMRIMDIPYLNLEGPDLQPKRDNVLHVT-FPKEWKTSDLYQLFSAFGNIQ---VSWIDDTSAFVSLSQPEQVQ 491          
BLAST of mRNA_F-serratus_M_contig91.20529.1 vs. uniprot
Match: T1JBS2_STRMM (Poly(A)-specific ribonuclease PARN n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1JBS2_STRMM)

HSP 1 Score: 183 bits (465), Expect = 1.350e-46
Identity = 164/560 (29.29%), Postives = 260/560 (46.43%), Query Frame = 0
Query:    1 MNITRENFEDNFDTVCKAIRASHFVAVDAEFTGLRAPGMPKERMTDSVKARYRIARASCSKFMVTQYGLCCFRFDEG-GRLEARPFNAFITPSTYF--GMDRIYSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSEEALIKEKIEARWLREAAAAAMEATHVSTEEPAPAQPAVVATRDGTTLESLGEEERNMILDARKKVETLLNEVSGEGNYVERSVKLDPMNRRQRWLIYEFVGANPAVKLSNLDGPHFARGIQIRTVSKDPK----------IEALAQAKIREDAKERQMEDLRRAVGFRRVIDEIAESGKPVITHNGLLDLFHTYDKFVGPIPVNFEEGTRAMHAFLPRLLDSKVIMNKAIAEGFALPCTTLGDAFRWLRENYSSATTGSSTVPGMTVDEAVENTGAEGVDKPCVEEDNKRRLQAWDALFAPGFEKRYTDNAQEHEAGYDAYLTGCCFVAAATLGLGVGVKEIKDVSLEGVIPTTLAPVSNSVPLYRVLGGQRMCLPGPTPPPDFSRYLHVSGFPPAAKTDAVMRPLKAVSGCEGTWFHWIDDTS 547
            M +TR NF++    +  AI+ + F+A+D EFTGL +  +      D+  +RY+  R    +F++ Q+GLC F++D+   R E +PFN +I P  +     D  + CQ+SS++FLSN GFDF      G+P+LS  +E  ++E++E R  +        +T + +E+        +AT D         E +  I D  KK+  L+          E+S++L+P N   R LIY+ V +             F  GI + T  KD +          +E + + ++ + + E  +++L  AVGF +VI  I++S K ++ HN LLDL H   +F  P+PV+FEE         PR+LD+K++ +        +  TTLG+    L +N                              P V+ +          + APGF    T + Q HEAGYDAY+TG CFV  A     +  +EIK +S+E  I   + P  N + L RV     + L G    P  +   HV  FP   KT  +++  +        +  W+DD S
Sbjct:    1 MEVTRTNFKETLSIISDAIKEATFIAIDGEFTGLNSGKILHG--FDTPNSRYQKIREGAMEFLLVQFGLCTFKYDKNRNRYETKPFNFYIFPRPFGRQSADVKFYCQSSSIDFLSNVGFDFNKLFKQGIPYLSPCDERRLREQLEQRHQQ------FSSTPIESEDSRK-----IATPD---------EHKAFIEDICKKITRLIESD-------EQSLELEPCNAYLRKLIYQNVKSR------------FKSGIHLDTKIKDARERYIKVFKADVEQMKEMEVAKKSTE--LDELDEAVGFSKVIKMISKSEKLIVGHNMLLDLCHILHQFCSPLPVDFEEFKSLSKYVFPRILDTKLMASTQPLRDI-INTTTLGELQVLLEKN------------------------------PFVKPE---------IVTAPGFTGYNTSSEQLHEAGYDAYVTGICFVTMADHLGSLQDEEIK-ISVECPI---VEPFINKLFLMRVQDIPYINLNGEDELPPRTHVFHVK-FPKEWKTSDLVQLFQPFGS---VYVAWVDDNS 469          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig91.20529.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNN0_ECTSI2.930e-22551.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W5U5L5_ICTPU1.320e-4828.62Poly(A)-specific ribonuclease PARN n=5 Tax=Siluroi... [more]
I3IUA3_ORENI1.790e-4829.27Poly(A)-specific ribonuclease PARN n=19 Tax=Percom... [more]
UPI00145B1E7A2.610e-4829.09poly(A)-specific ribonuclease PARN n=2 Tax=Oxuderc... [more]
A0A3Q3A9J3_KRYMA2.220e-4727.92Poly(A)-specific ribonuclease PARN n=2 Tax=Kryptol... [more]
A0A3Q1AR66_AMPOC2.420e-4728.22Poly(A)-specific ribonuclease PARN n=3 Tax=Percomo... [more]
A0A3P9C7U1_9CICH3.820e-4728.75Poly(A)-specific ribonuclease PARN n=6 Tax=Percomo... [more]
UPI001458A4375.630e-4728.77poly(A)-specific ribonuclease PARN-like isoform X1... [more]
PARN_XENLA7.850e-4728.57Poly(A)-specific ribonuclease PARN n=12 Tax=Xenopu... [more]
T1JBS2_STRMM1.350e-4629.29Poly(A)-specific ribonuclease PARN n=1 Tax=Strigam... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 267..287
NoneNo IPR availablePANTHERPTHR15092POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1coord: 1..579
NoneNo IPR availablePANTHERPTHR15092:SF22POLY(A)-SPECIFIC RIBONUCLEASE PARNcoord: 1..579
IPR006941Ribonuclease CAF1PFAMPF04857CAF1coord: 3..450
e-value: 5.3E-73
score: 246.0
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..455

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig91contigF-serratus_M_contig91:824517..829202 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig91.20529.1mRNA_F-serratus_M_contig91.20529.1Fucus serratus malemRNAF-serratus_M_contig91 823971..829327 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig91.20529.1 ID=prot_F-serratus_M_contig91.20529.1|Name=mRNA_F-serratus_M_contig91.20529.1|organism=Fucus serratus male|type=polypeptide|length=623bp
MNITRENFEDNFDTVCKAIRASHFVAVDAEFTGLRAPGMPKERMTDSVKA
RYRIARASCSKFMVTQYGLCCFRFDEGGRLEARPFNAFITPSTYFGMDRI
YSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSEEALIKEKIEARWLREAA
AAAMEATHVSTEEPAPAQPAVVATRDGTTLESLGEEERNMILDARKKVET
LLNEVSGEGNYVERSVKLDPMNRRQRWLIYEFVGANPAVKLSNLDGPHFA
RGIQIRTVSKDPKIEALAQAKIREDAKERQMEDLRRAVGFRRVIDEIAES
GKPVITHNGLLDLFHTYDKFVGPIPVNFEEGTRAMHAFLPRLLDSKVIMN
KAIAEGFALPCTTLGDAFRWLRENYSSATTGSSTVPGMTVDEAVENTGAE
GVDKPCVEEDNKRRLQAWDALFAPGFEKRYTDNAQEHEAGYDAYLTGCCF
VAAATLGLGVGVKEIKDVSLEGVIPTTLAPVSNSVPLYRVLGGQRMCLPG
PTPPPDFSRYLHVSGFPPAAKTDAVMRPLKAVSGCEGTWFHWIDDTSGVA
EISTAEAAQALLQAAVSASANADTSVSAKKAEAVDPTQLGLGDMKVVQLS
CSILEVDEEDGDEKRSTKRIRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006941RNase_CAF1
IPR012337RNaseH-like_sf