mRNA_F-serratus_M_contig91.20529.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig91.20529.1 vs. uniprot
Match: D7FNN0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNN0_ECTSI) HSP 1 Score: 651 bits (1680), Expect = 4.850e-222 Identity = 360/704 (51.14%), Postives = 458/704 (65.06%), Query Frame = 3
Query: 126 MNITRENFEDNFDTVCKAIRASHFVAVDAEFTGLRAPGMPKERMTDSVKARYRIARASCSKFMVTQYGLCCFRFDEGGRLEARPFNAFITPSTYFGMDRIYSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSEEALIKEKIEARWLREAAAAAMEATHVSTEEP------------APAQPAVVATRDGTTLESLGEEERNMILDARKKVETLLNEVSGEGNYVERSVKLDPMNRRQRWLIYEFVGANPA-VKLSNLDGPHFARGIQIRTVSKD-PKIEALAQAKIREDAKERQMEDLRRAVGFRRVIDEIAESGKPVITHNGLLDLFHTYDKFVGPIPVNFEEGTRAMHAFLPRLLDSKVIMNKAIAEGFALPCTTLGDAFRWLRENYSS---------------------ATTGSSTVPGMTVDEAVENTGAEGVDK----------------PCVE------------EDNKRRLQAWDALFAPGFEKRYTDNAQEHEAGYDAYLTGCCFVAAATLGLGVGVKEIKDVSLEGVIPTTLAPVSNSVPLYRVLGGQRMCLPGPTPPPDFSRYLHVSGFPPAAKTDAVMRPLKAVSGCEGTWFHWIDDTSGVAEISTAEAAQALLQAAVSASA----------NADTSVSAKKAEAVDPTQLGLGDMKVVQLSCSIL--------EVDEEDGDE--KRSTKRIR 1988
MNIT+ENFE +FD +C+AIR+SHF+A+D EFTGLR PG +E+M DSV+ARY +AR SCS+FM+TQYG+CCFR+ + RLEARPFN F+ PSTY G DR+YSCQASSM+FLS HGFDFQAW +HGVPFLSR+EE +++ K+ RW REA AA V+ A + V RDGTT+ESL E E+ M+ DA KKVE LL E S G YV++SVKL+PMN RQRWL+YEFVG++ A VKLSNL GP +AR ++IRTV KD P+ A +AK+R D + RQ+ DLRRAVGFRRV+DEI+++GKPVI HNGLLDL HT+DKFVGPIPV+ ++GTRA+H+ LPRL DSKV+M KA+A G LP T LG+A +WLRE Y + A V G V A G K P VE E +R + WDA+ APGFE+RY D +EHEAG+DAYLTGCCF AAAT+GLGVG+ E+K ++ P L N +PLY+V+GGQ++CLPGP P D SRY+HVSGFP AA+TDAV+ +KAV GC +WFHW+DDTSGV + ++AE A+ALL+AA + + E DP +L LGD+K+VQ+ ++L E +E++G E R KR+R
Sbjct: 1 MNITKENFEQSFDVICEAIRSSHFIALDTEFTGLRLPGAAREKMMDSVQARYDLARGSCSQFMLTQYGICCFRYHDE-RLEARPFNCFVVPSTYHGSDRVYSCQASSMDFLSKHGFDFQAWASHGVPFLSRAEEEVVEGKLRRRWEREATVAAERKEAVAXXXXXXXXXXXXXXXAAAVEGPVHTARDGTTIESLQEPEKGMVKDALKKVEALLAESSSGGEYVQKSVKLEPMNGRQRWLMYEFVGSSTADVKLSNLPGPAYARPMEIRTVCKDDPEKHAEEEAKLRADEQARQLGDLRRAVGFRRVVDEISKAGKPVICHNGLLDLLHTHDKFVGPIPVDMDDGTRALHSLLPRLFDSKVVMAKAMAAGMKLPRTVLGEAHQWLREKYPAPXXXXXXLEEGAEAGMEPAEGAAEEGQQVDGTAVVATTSGGEANGDSKTNGEGXXXXXXXXXAVPPVEAGAEAAASERDVEALERARRGWDAVLAPGFEERYKDGGREHEAGFDAYLTGCCFAAAATVGLGVGLDELKRMASGEETPAALGSAQNVLPLYKVVGGQQVCLPGPAPKVDLSRYVHVSGFPSAARTDAVLASIKAVDGCVDSWFHWMDDTSGVVDCTSAEGAEALLRAAAAXXXXXXXXXXXXXGTPAAGDGGSGEEADPCRLSLGDLKLVQMEHALLNGGGRGAPEAEEQEGGEGTARGAKRLR 703
BLAST of mRNA_F-serratus_M_contig91.20529.1 vs. uniprot
Match: W5U5L5_ICTPU (Poly(A)-specific ribonuclease PARN n=5 Tax=Siluroidei TaxID=1489793 RepID=W5U5L5_ICTPU) HSP 1 Score: 190 bits (482), Expect = 1.930e-47 Identity = 164/573 (28.62%), Postives = 262/573 (45.72%), Query Frame = 3
Query: 126 MNITRENFEDNFDTVCKAIRASHFVAVDAEFTGLRAPGMPKERMT---DSVKARYRIARASCSKFMVTQYGLCCFRFDEG-GRLEARPFNAFITPSTYF--GMDRIYSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSEEALIKEKIEARWLREAAAAAMEATHVSTEEPAPAQPAVVATRDGTTLESLGEEERNMILDARKKVETLLNEVSGEGNYVERSVKLDPMNRRQRWLIYEFVGANPAVKLSNLDGPHFARGIQIRTVSKDPKIEALAQAKIREDAK--------ERQMEDLRRAVGFRRVIDEIAESGKPVITHNGLLDLFHTYDKFVGPIPVNFEEGTRAMHAFLPRLLDSKVIMNKAIAEGFALPCTTLGDAFRWLRENYSSATTGSSTVPGMTVDEAVENTGAEGVDKPCVEEDNKRRLQAWDALFAPGFEKRYTDNAQEHEAGYDAYLTGCCFVAAATLGLGVGVKEIKDVSLEGVIPTTLAPVSNSVPLYRVLGGQRMCLPGPTPPPDFSRYLHVSGFPPAAKTDAVMRPLKAVSGCEGTWFHWIDDTSGVAEISTAEAAQ 1802
M +TR++F+D V A++ + F+A+D EF+GL + G +T D+ + RY R F++ Q+GLC FR+D+ R + FN +I P + D + CQ+SS++FL++ GFDF +G+P+L++ EE+ ++E+ E R ++ V T P+ ++ ++ EE ++ I +KVE LLN E++V L+P + QR LIY+ + F +G+ I TV D K + +K+ E+ + ER+ E+L AVGF RVI I++SGK V+ HN LLD+ HT +F P+P ++ PRLLD+K++ +ST P E + NT ++K E + +A + GF+ T + Q HEAGYDAY+TG CF++ A +S + + P N + L RV + + GP P L+V+ FP KT + + A + W+DDTS +S E Q
Sbjct: 1 MEVTRQSFKDTLSVVYSAVQEADFLAIDGEFSGL-SDGPAVSMLTNGMDTPEERYSKLRKHSMDFLLFQFGLCTFRYDQSQSRYFTKAFNFYIFPKPFSRASPDIKFICQSSSIDFLASQGFDFNKVFRNGIPYLNQGEESQLREQYEER--------RNQSNGVGT-------PSYISPTSCKGPMNIPEEHKDFINRVVEKVEALLNNS-------EKTVDLEPCSGFQRKLIYQTLNWK------------FPKGLHIETVENDKKERFIQISKVDEEERKRIEQQKHEREQEELNDAVGFSRVIHTISKSGKLVVGHNMLLDVMHTIHQFYCPLPEELDDFKEVTMCVFPRLLDTKLM---------------------------------ASTQPFK---ELITNTSLAELEKQLKE----KPFKAPRVACSEGFQSYDTASEQLHEAGYDAYITGLCFISMANYLGSFLTPPRAHISARSKL---IEPFYNKLFLMRVADIPYLNISGPDLQPKRDNVLYVT-FPKEWKTSDLYQLFSAFGNIQ---VSWVDDTSAFVSLSQLEQVQ 491
BLAST of mRNA_F-serratus_M_contig91.20529.1 vs. uniprot
Match: I3IUA3_ORENI (Poly(A)-specific ribonuclease PARN n=19 Tax=Percomorphaceae TaxID=1489872 RepID=I3IUA3_ORENI) HSP 1 Score: 190 bits (482), Expect = 2.630e-47 Identity = 168/574 (29.27%), Postives = 265/574 (46.17%), Query Frame = 3
Query: 126 MNITRENFEDNFDTVCKAIRASHFVAVDAEFTGLRAPGMPKERMT---DSVKARYRIARASCSKFMVTQYGLCCFRFDEG-GRLEARPFNAFITPSTY--FGMDRIYSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSEEALIKEKIEARWLREAAAAAMEATHVSTEEPAPAQPAVVATRDGTTLESLGEEERNMILDARKKVETLLNEVSGEGNYVERSVKLDPMNRRQRWLIYEFVGANPAVKLSNLDGPHFARGIQIRTVSKDPKIEALAQAKIREDAK--------ERQMEDLRRAVGFRRVIDEIAESGKPVITHNGLLDLFHTYDKFVGPIPVNFEEGTRAMHAFLPRLLDSKVIMNKAIAEGFALPCTTLGDAFRWLRENYSSATTGSSTVPGMTVDEAVENTGAEGVDKPCVEEDNKRRLQAWDALFAPGFEKRYTDNAQEHEAGYDAYLTGCCFVAAATLGLGVGVKEIKD-VSLEGVIPTTLAPVSNSVPLYRVLGGQRMCLPGPTPPPDFSRYLHVSGFPPAAKTDAVMRPLKAVSGCEGTWFHWIDDTSGVAEISTAEAAQ 1802
M +TR+N++D +TV AI + F+A+D EF+G+ + G +T D+ + RY + F++ Q+GLC F++D+ + +PFN +I P + D + CQ+SS++FL++ GFDF HG+P+L++ EEA ++E+ E R + A V T P+ ++ + EE ++ I +KVE LL GN E+++ L+P QR LIY+ + F +G+ + TV + K + +K+ E+ + ER+ E+L AVGF RVI I++SGK V+ HN LLD+ HT +F P+P + ++ PRLLD+K++ +ST P E + NT ++K E K A GF T Q HEAGYDAY+TG CF+A A LG + K +S + + P N + L R++ + + GP P L+V+ FP KT + + A + WIDDTS +S + Q
Sbjct: 1 MEVTRKNYKDCLNTVYSAIEEADFLAIDGEFSGI-SDGPNVSALTNGLDTPEERYTKLKKHSMDFLLFQFGLCTFKYDQAKSKYITKPFNFYIFPKPFNRTSPDIKFICQSSSIDFLASQGFDFNKVFCHGIPYLNQEEEAQLREQTEERRNQHA-------NGVGT-------PSFISPSSSKGSSHVPEEHKDFINKVVEKVEALL------GNS-EKTLDLEPCTGFQRKLIYQTLNWK------------FPKGLHVETVETEKKERYIQISKVDEEERKRREQQKLEREQEELNDAVGFSRVIHAISKSGKLVVGHNMLLDVMHTIHQFYCPLPEDLQDFKEVTMCVFPRLLDTKLM---------------------------------ASTQPFK---ELITNTSLAELEKQLKESPFKSPQ----VETAEGFPSYDTAQEQLHEAGYDAYITGLCFIAMANY-LGSFLTPPKAYISARSKL---IEPFFNKLFLMRIIDIPYLNITGPDLQPKRDHVLYVT-FPKEWKTSDLYQLFSAFGNIQ---VSWIDDTSAFVSLSQTDQVQ 492
BLAST of mRNA_F-serratus_M_contig91.20529.1 vs. uniprot
Match: UPI00145B1E7A (poly(A)-specific ribonuclease PARN n=2 Tax=Oxudercinae TaxID=497678 RepID=UPI00145B1E7A) HSP 1 Score: 189 bits (481), Expect = 3.800e-47 Identity = 167/574 (29.09%), Postives = 266/574 (46.34%), Query Frame = 3
Query: 126 MNITRENFEDNFDTVCKAIRASHFVAVDAEFTGLRAPGMPKERMT---DSVKARYRIARASCSKFMVTQYGLCCFRFDEG-GRLEARPFNAFITPSTY--FGMDRIYSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSEEALIKEKIEARWLREAAAAAMEATHVSTEEPAPAQPAVVATRDGTTLESLGEEERNMILDARKKVETLLNEVSGEGNYVERSVKLDPMNRRQRWLIYEFVGANPAVKLSNLDGPHFARGIQIRTVSKDPKIEALAQAKIREDAK--------ERQMEDLRRAVGFRRVIDEIAESGKPVITHNGLLDLFHTYDKFVGPIPVNFEEGTRAMHAFLPRLLDSKVIMNKAIAEGFALPCTTLGDAFRWLRENYSSATTGSSTVPGMTVDEAVENTGAEGVDKPCVEEDNKRRLQAWDALFAPGFEKRYTDNAQEHEAGYDAYLTGCCFVAAATLGLGVGVKEIKD-VSLEGVIPTTLAPVSNSVPLYRVLGGQRMCLPGPTPPPDFSRYLHVSGFPPAAKTDAVMRPLKAVSGCEGTWFHWIDDTSGVAEISTAEAAQ 1802
M +TR NF+++ DTV +AI + F+A+D EF+G+ + G +T D+ + RY + F++ Q+GLC F++D+ + +PFN +I P + D + CQ+SS++FL++ GFDF HG+P+L++ EE ++E+ E R + A V T P+ ++ ++ + +E ++ I +KVE LL+ ++S+ LDP QR L+Y+ + F +GI I TV + K + +K+ E+ E++ E+L AVGF RVI I++SGK V+ HN LLD+ HT +F P+P + +E PRLLD+K++ SST P E + NT ++K E K + A GF T Q HEAGYDAY+TG CF++ A LG + K +S + + P N + L R++ + + GP P L+V+ FP KT + + A + WIDDTS +S + Q
Sbjct: 1 MELTRRNFKESLDTVYEAIEEADFLAIDGEFSGI-SDGPNVSALTNGLDTPEERYAKLKKHSMDFLLFQFGLCTFKYDQSQSKYITKPFNFYIFPKPFNRSSPDIKFICQSSSIDFLASQGFDFNKVFCHGIPYLNQEEEVQLREQTEERRNQHA-------NGVGT-------PSFISPSSKSSAH-VPDEHKDFINRVVQKVEALLSNS-------DKSLDLDPCTGFQRKLVYQTLNWK------------FPKGIHIETVETEKKERFIQVSKVDEEEXXXXXXXXVEKEQEELNDAVGFSRVIHAISKSGKLVVGHNMLLDVMHTIHQFYCPLPEDLQEFKEVTMCVFPRLLDTKLM---------------------------------SSTQPFK---ELITNTSLAELEKQLKESPFK----CPQVVTADGFPSYDTAQEQLHEAGYDAYITGLCFISMANY-LGSFLTPPKGHISARSKL---IEPFYNKLFLMRIIDIPYLNMTGPDLQPKRDHVLYVT-FPKEWKTSDLYQLFSAFGNIQ---VSWIDDTSAFVSLSQTDQVQ 491
BLAST of mRNA_F-serratus_M_contig91.20529.1 vs. uniprot
Match: A0A3Q3A9J3_KRYMA (Poly(A)-specific ribonuclease PARN n=2 Tax=Kryptolebias marmoratus TaxID=37003 RepID=A0A3Q3A9J3_KRYMA) HSP 1 Score: 187 bits (474), Expect = 2.970e-46 Identity = 160/573 (27.92%), Postives = 262/573 (45.72%), Query Frame = 3
Query: 126 MNITRENFEDNFDTVCKAIRASHFVAVDAEFTGLRAPGMPKERMT---DSVKARYRIARASCSKFMVTQYGLCCFRFDEG-GRLEARPFNAFITPSTY--FGMDRIYSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSEEALIKEKIEARWLREAAAAAMEATHVSTEEPAPAQPAVVATRDGTTLESLGEEERNMILDARKKVETLLNEVSGEGNYVERSVKLDPMNRRQRWLIYEFVGANPAVKLSNLDGPHFARGIQIRTVSKDPKIEALAQAKIREDAK--------ERQMEDLRRAVGFRRVIDEIAESGKPVITHNGLLDLFHTYDKFVGPIPVNFEEGTRAMHAFLPRLLDSKVIMNKAIAEGFALPCTTLGDAFRWLRENYSSATTGSSTVPGMTVDEAVENTGAEGVDKPCVEEDNKRRLQAWDALFAPGFEKRYTDNAQEHEAGYDAYLTGCCFVAAATLGLGVGVKEIKDVSLEGVIPTTLAPVSNSVPLYRVLGGQRMCLPGPTPPPDFSRYLHVSGFPPAAKTDAVMRPLKAVSGCEGTWFHWIDDTSGVAEISTAEAAQ 1802
M +TR+NF+D+ TVC AI + F+A+D EF+G+ + G +T D+ + RY + F++ Q+GLC F++D+ + +PFN ++ P + D + CQ+SS++FL++ GFDF HG+P+L++ EEA ++E+ E R + A + T P+ ++ + +E+++ + +KVE L + E+++ L+P QR L+Y+ + F +G+ + T+ + K + +K+ E+ K ER+ E+L AVGF RVI I++S K V+ HN LLD+ HT +F P+P + ++ PRLLD+K++ +ST P E + NT ++K E K A GF T Q HEAGYDAY+TG CF++ A LG + K S + P N + L R++ + + GP P L+V+ FP KT + + A + WIDDTS +S + Q
Sbjct: 1 MEVTRKNFKDSLSTVCSAIDEADFLAIDGEFSGI-SDGPNVSALTNGLDTPEERYTKLKKHSMDFLMFQFGLCTFKYDQTKSKYITKPFNFYVFPKPFNRTSPDIKFICQSSSIDFLASQGFDFNKVFCHGIPYLNQEEEAQLREQTEERRNQHA-------NGLGT-------PSFISPSSSKVPAHVPDEQKDFVNKVVEKVEALFSNN-------EKTLDLEPCTGFQRKLVYQTLSWK------------FPKGLHVETLETEKKERYIQVSKVDEEEKKKRXXXXLEREQEELNDAVGFSRVIHAISKSSKLVVGHNMLLDVMHTIHQFYCPLPEDLQDFKDVTMCVFPRLLDTKLM---------------------------------ASTQPFK---ELISNTSLAELEKQVKESPFKPPK----VETAEGFPSYDTAQEQLHEAGYDAYITGLCFISMAN-HLGSFLTPPK--SYISARSKLIEPFFNKLFLMRIIDIPYLNITGPDLQPKRDHVLYVT-FPKEWKTSDLYQLFSAFGNIQ---VSWIDDTSAFVSLSQTDQVQ 492
BLAST of mRNA_F-serratus_M_contig91.20529.1 vs. uniprot
Match: A0A3Q1AR66_AMPOC (Poly(A)-specific ribonuclease PARN n=3 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3Q1AR66_AMPOC) HSP 1 Score: 187 bits (474), Expect = 3.230e-46 Identity = 162/574 (28.22%), Postives = 268/574 (46.69%), Query Frame = 3
Query: 126 MNITRENFEDNFDTVCKAIRASHFVAVDAEFTGLRAPGMPKERMT---DSVKARYRIARASCSKFMVTQYGLCCFRFDEG-GRLEARPFNAFITPSTY--FGMDRIYSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSEEALIKEKIEARWLREAAAAAMEATHVSTEEPAPAQPAVVATRDGTTLESLGEEERNMILDARKKVETLLNEVSGEGNYVERSVKLDPMNRRQRWLIYEFVGANPAVKLSNLDGPHFARGIQIRTVSKDPKIEALAQAKIREDAK--------ERQMEDLRRAVGFRRVIDEIAESGKPVITHNGLLDLFHTYDKFVGPIPVNFEEGTRAMHAFLPRLLDSKVIMNKAIAEGFALPCTTLGDAFRWLRENYSSATTGSSTVPGMTVDEAVENTGAEGVDKPCVEEDNKRRLQAWDALFAPGFEKRYTDNAQEHEAGYDAYLTGCCFVAAATLGLGVGVKEIKD-VSLEGVIPTTLAPVSNSVPLYRVLGGQRMCLPGPTPPPDFSRYLHVSGFPPAAKTDAVMRPLKAVSGCEGTWFHWIDDTSGVAEISTAEAAQ 1802
M +TR+N++D+ TV AI + F+A+D EF+G+ + G +T D+ + RY + F++ Q+GLC F++D+ + +PFN +I P + D + CQ+SS++FL++ GFDF HG+P+L++ EEA ++E+ E R ++A V T P+ ++ + EE ++ I +KVE L + E+++ LDP QR LIY+ + F +G+ + TV + K + +K+ E+ + ER+ E+L AVGF RVI I++SGK V+ HN LLD+ HT +F P+P + ++ PRLLD+K++ + + + T+L + + L+EN + P VE R ++D T Q HEAGYDAY+TG CF++ A LG + K +S + + P N + L R++ + + GP P L+V+ FP KT + + A + W+DDTS +S + Q
Sbjct: 1 MEVTRKNYKDSLSTVYSAIEEADFLAIDGEFSGI-SDGPNVSALTNGLDTPEERYTKLKKHSMDFLLFQFGLCTFKYDQTKSKYITKPFNFYIFPKPFNRTSPDIKFICQSSSIDFLASQGFDFNKVFCHGIPYLNQEEEAQLREQTEERRNQQA-------NGVGT-------PSFISPSSSKGPAHVPEEHKDFINRVVEKVEALFSNS-------EKTLDLDPCTGFQRKLIYQTLNWK------------FPKGLHVETVETEKKERYIQVSKVDEEERKRREQQKLEREQEELNDAVGFSRVIHAISKSGKLVVGHNMLLDVMHTIHQFYCPLPEDLQDFKEVTMCVFPRLLDTKLMASTQPFKEL-ITNTSLAELEKQLKENPFKS--------------------------PQVE--TTERFPSYD-----------TAQEQLHEAGYDAYITGLCFISMANY-LGSFLTPPKAYISARSKL---IEPFFNKLFLMRIIDIPYLNITGPDLQPKRDHVLYVT-FPKEWKTSDLYQLFSAFGNIQ---VSWVDDTSAFVSLSQTDQVQ 492
BLAST of mRNA_F-serratus_M_contig91.20529.1 vs. uniprot
Match: A0A3P9C7U1_9CICH (Poly(A)-specific ribonuclease PARN n=6 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3P9C7U1_9CICH) HSP 1 Score: 186 bits (472), Expect = 4.970e-46 Identity = 165/574 (28.75%), Postives = 265/574 (46.17%), Query Frame = 3
Query: 126 MNITRENFEDNFDTVCKAIRASHFVAVDAEFTGLRAPGMPKERMT---DSVKARYRIARASCSKFMVTQYGLCCFRFDEG-GRLEARPFNAFITPSTY--FGMDRIYSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSEEALIKEKIEARWLREAAAAAMEATHVSTEEPAPAQPAVVATRDGTTLESLGEEERNMILDARKKVETLLNEVSGEGNYVERSVKLDPMNRRQRWLIYEFVGANPAVKLSNLDGPHFARGIQIRTVSKDPKIEALAQAKIREDAK--------ERQMEDLRRAVGFRRVIDEIAESGKPVITHNGLLDLFHTYDKFVGPIPVNFEEGTRAMHAFLPRLLDSKVIMNKAIAEGFALPCTTLGDAFRWLRENYSSATTGSSTVPGMTVDEAVENTGAEGVDKPCVEEDNKRRLQAWDALFAPGFEKRYTDNAQEHEAGYDAYLTGCCFVAAATLGLGVGVKEIKD-VSLEGVIPTTLAPVSNSVPLYRVLGGQRMCLPGPTPPPDFSRYLHVSGFPPAAKTDAVMRPLKAVSGCEGTWFHWIDDTSGVAEISTAEAAQ 1802
M +TR+N++D +TV AI + F+A+D EF+G+ + G +T D+ + RY + F++ Q+GLC F++D+ + +PFN +I P + D + CQ+SS++FL++ GFDF HG+P+L++ EEA ++E+ E R + A V T P+ ++ + EE ++ I +KVE L+ V+ E +++ L+P QR LIY+ + F +G+ + TV + K + +K+ E+ + E++ E+L AVGF RVI I++SGK V+ HN LLD+ HT +F P+P + ++ PRLLD+K++ +ST P E + NT ++K E K A GF T Q HEAGYDAY+TG CF+A A LG + K +S + + P N + L R++ + + GP P L+V+ FP KT + + A + WIDDTS +S + Q
Sbjct: 1 MEVTRKNYKDCLNTVYSAIEEADFLAIDGEFSGI-SDGPNVSALTNGLDTPEERYTKLKKHSMDFLLFQFGLCTFKYDQAKSKYITKPFNFYIFPKPFNRTSPDIKFICQSSSIDFLASQGFDFNKVFCHGIPYLNQEEEAQLREQTEERRNQHA-------NGVGT-------PSFISPSSSKGSSHVPEEHKDFINKVVEKVEALM--VNSE-----KTLDLEPCTGFQRKLIYQTLNWK------------FPKGLHVETVETEKKERYIQISKVDEEERKXXXXXKLEKEQEELNDAVGFSRVIHAISKSGKLVVGHNMLLDVMHTIHQFYCPLPEDIQDFKEVTMCVFPRLLDTKLM---------------------------------ASTQPFK---ELITNTSLAELEKQLKESPFKSPQ----VETAEGFPSYDTAQEQLHEAGYDAYITGLCFIAMANY-LGSFLTPPKAYISARSKL---IEPFFNKLFLMRIIDIPYLNITGPDLQPKRDHVLYVT-FPKEWKTSDLYQLFSAFGNIQ---VSWIDDTSAFVSLSQTDQVQ 492
BLAST of mRNA_F-serratus_M_contig91.20529.1 vs. uniprot
Match: UPI001458A437 (poly(A)-specific ribonuclease PARN-like isoform X1 n=3 Tax=Pecten maximus TaxID=6579 RepID=UPI001458A437) HSP 1 Score: 184 bits (468), Expect = 6.900e-46 Identity = 166/577 (28.77%), Postives = 263/577 (45.58%), Query Frame = 3
Query: 126 MNITRENFEDNFDTVCKAIRASHFVAVDAEFTGLRAPGMPKERMTDSVKARYRIARASCSKFMVTQYGLCCFRFDEGGRL-EARPFNAFITPSTYF--GMDRIYSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSEEALIKEKIEARWLREAAAAAMEATHVSTEEPAPAQPAVVATRDGTTLESLGEEERNMILDARKKVETLLNEVSGEGNYVERSVKLDPMNRRQRWLIYEFVGANPAVKLSNLDGPHFARGIQIRTVSKDPKIEALAQAKIR--EDAKERQME-------DLRRAVGFRRVIDEIAESGKPVITHNGLLDLFHTYDKFVGPIPVNFEEGTRAMHAFLPRLLDSKVIMNKAIAEGFALPCTTLGDAFRWLRENYSSATTGSSTVPGMTVDEAVENTGAEGVDKPCVEEDNKRRLQAWDALFAPGFEKRYTDNAQEHEAGYDAYLTGCCFVAAATLGLGVGVKEIKDVSLEGVIPTT--LAPVSNSVPLYRVLGGQRMCLPGPTPPPDFSRYLHVSGFPPAAKTDAVMRPLKAVSGCEGTWFHWIDDTSGVAEISTAEAAQALLQ 1814
M ITR+NF+ + V ++I ++ F+AVD EFTGL + D+ + RY+ R F++ Q+G+C F +DE L EARPFN ++ P Y G D + CQ+SS+EFL++ GFDF G+ +L+ +EA ++E ++ + + PA P V+ S+ +E++ I + +KV + +++ E + L N QR LIY+ + A F GI + T + + K + +I+ ED K R+ E DL AVGF +VI I++SGK V+ HN +LDL H +F P+P ++EE + P++LD+K++ + + + + T L D + + +EN KP Q A F K T+ HEAGYDAYLTG CF+ + LG +D+ V P++ + P +N + L RV + L G P+ H++ FP KT ++ G + W++DTS A + E AQ LQ
Sbjct: 1 MEITRKNFKQRLNFVTESINSADFLAVDGEFTGLDSNNGGHAMPFDTPEVRYQRVRQGACDFLLLQFGICTFHYDEAKMLYEARPFNFYLFPRPYSRTGPDIRFMCQSSSIEFLASQGFDFNKAFKDGISYLTPGDEANLREALQQKHQQ----------FSQFSSPAFVTPDGVSQGTSKGPVSIPDEQKEFIKEICEKVSDFIEKLT------EDKLSLPSCNGFQRKLIYQSLRAQ------------FPSGIHLETQTGEKKERHIVVTRIKSEEDMKRREAEKQAAEVADLDNAVGFTKVIRAISQSGKLVVGHNMMLDLIHILHQFFYPLPESYEEFKDMCMSAFPKMLDTKLMASTSPFKD-RIMSTVLAD-----------------------LQKILEN-------KP---------FQKAQVEIAEKFSKYTTEKGPLHEAGYDAYLTGICFICMSNF-LGTFQNPSQDI----VPPSSPLVQPFTNKLFLMRVYDIPYLNLGGQDLTPNRDHVFHLT-FPKEWKTSDIVHLFSPFGGSQ---IFWLNDTSAFASLHFKEDAQKALQ 500
BLAST of mRNA_F-serratus_M_contig91.20529.1 vs. uniprot
Match: PARN_XENLA (Poly(A)-specific ribonuclease PARN n=12 Tax=Xenopus TaxID=8353 RepID=PARN_XENLA) HSP 1 Score: 184 bits (468), Expect = 9.650e-46 Identity = 164/574 (28.57%), Postives = 260/574 (45.30%), Query Frame = 3
Query: 126 MNITRENFEDNFDTVCKAIRASHFVAVDAEFTGLRAPGMPKERMT---DSVKARYRIARASCSKFMVTQYGLCCFRFDEG-GRLEARPFNAFITPSTYF--GMDRIYSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSEEALIKEKIEARWLREAAAAAMEATHVSTEEPAPAQPAVVATRDGTTLESLGEEERNMILDARKKVETLLNEVSGEGNYVERSVKLDPMNRRQRWLIYEFVGANPAVKLSNLDGPHFARGIQIRTVSKDPKIEALAQAKIREDAKER--------QMEDLRRAVGFRRVIDEIAESGKPVITHNGLLDLFHTYDKFVGPIPVNFEEGTRAMHAFLPRLLDSKVIMNKAIAEGFALPCTTLGDAFRWLRENYSSATTGSSTVPGMTVDEAVENTGAEGVDKPCVEEDNKRRLQAWDALFAPGFEKRYTDNAQEHEAGYDAYLTGCCFVAAATLGLGVGVKEIKD-VSLEGVIPTTLAPVSNSVPLYRVLGGQRMCLPGPTPPPDFSRYLHVSGFPPAAKTDAVMRPLKAVSGCEGTWFHWIDDTSGVAEISTAEAAQ 1802
M ITR NF+D V KAI + F+A+D EF+G+ + G +T D+ + RY + +F++ Q+GLC F +D + + FN +I P + D+ + CQ+SS++FL+N GFDF +G+P+L++ EE +++++ E R + A+ M + ++ T S+ +E++ I ++VE L ++S+ ++P QR LIY+ + + RGI + TV + K + +K+ E+ ++R + E+L AVGF R+I I+ SGK V+ HN LLD+ HT +F +P E + PR+LD+K++ +ST P E + NT ++K E K A GF+ T + Q HEAGYDAY+TG CF++ A LG + KD VS I + P N + L R++ + L GP P LHV+ FP KT + + A + WIDDTS +S E Q
Sbjct: 1 MEITRSNFKDTLPKVYKAIEEADFLAIDGEFSGI-SDGPSVSTLTNGFDTPEERYTKLKKHSMEFLLFQFGLCTFNYDNTEAKYLMKSFNFYIFPKPFNRNSPDKKFVCQSSSIDFLANQGFDFNKVFRNGIPYLNQEEERVLRDQYEDRRSQSNGASTM---------------SYISPNSSKTPVSIPDEQKGFIDKVVERVEDFLKNE-------QKSMNVEPCTGYQRKLIYQTLNWK------------YPRGIHVETVESEKKERYIVISKVDEEERKRMEQQKQAKEREELDDAVGFSRIIQAISSSGKLVVGHNMLLDVMHTIHQFFCQLPDELNEFKEVTNCVFPRVLDTKLM---------------------------------ASTNPFK---EIIYNTSLAELEKRLKEAPFKPPK----VDSAEGFQSYNTASEQLHEAGYDAYITGLCFISMANY-LGSFLSPPKDYVSCRSKI---VRPFFNKLFLMRIMDIPYLNLEGPDLQPKRDNVLHVT-FPKEWKTSDLYQLFSAFGNIQ---VSWIDDTSAFVSLSQPEQVQ 491
BLAST of mRNA_F-serratus_M_contig91.20529.1 vs. uniprot
Match: T1JBS2_STRMM (Poly(A)-specific ribonuclease PARN n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1JBS2_STRMM) HSP 1 Score: 183 bits (465), Expect = 1.600e-45 Identity = 164/560 (29.29%), Postives = 260/560 (46.43%), Query Frame = 3
Query: 126 MNITRENFEDNFDTVCKAIRASHFVAVDAEFTGLRAPGMPKERMTDSVKARYRIARASCSKFMVTQYGLCCFRFDEG-GRLEARPFNAFITPSTYF--GMDRIYSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSEEALIKEKIEARWLREAAAAAMEATHVSTEEPAPAQPAVVATRDGTTLESLGEEERNMILDARKKVETLLNEVSGEGNYVERSVKLDPMNRRQRWLIYEFVGANPAVKLSNLDGPHFARGIQIRTVSKDPK----------IEALAQAKIREDAKERQMEDLRRAVGFRRVIDEIAESGKPVITHNGLLDLFHTYDKFVGPIPVNFEEGTRAMHAFLPRLLDSKVIMNKAIAEGFALPCTTLGDAFRWLRENYSSATTGSSTVPGMTVDEAVENTGAEGVDKPCVEEDNKRRLQAWDALFAPGFEKRYTDNAQEHEAGYDAYLTGCCFVAAATLGLGVGVKEIKDVSLEGVIPTTLAPVSNSVPLYRVLGGQRMCLPGPTPPPDFSRYLHVSGFPPAAKTDAVMRPLKAVSGCEGTWFHWIDDTS 1766
M +TR NF++ + AI+ + F+A+D EFTGL + + D+ +RY+ R +F++ Q+GLC F++D+ R E +PFN +I P + D + CQ+SS++FLSN GFDF G+P+LS +E ++E++E R + +T + +E+ +AT D E + I D KK+ L+ E+S++L+P N R LIY+ V + F GI + T KD + +E + + ++ + + E +++L AVGF +VI I++S K ++ HN LLDL H +F P+PV+FEE PR+LD+K++ + + TTLG+ L +N P V+ + + APGF T + Q HEAGYDAY+TG CFV A + +EIK +S+E I + P N + L RV + L G P + HV FP KT +++ + + W+DD S
Sbjct: 1 MEVTRTNFKETLSIISDAIKEATFIAIDGEFTGLNSGKILHG--FDTPNSRYQKIREGAMEFLLVQFGLCTFKYDKNRNRYETKPFNFYIFPRPFGRQSADVKFYCQSSSIDFLSNVGFDFNKLFKQGIPYLSPCDERRLREQLEQRHQQ------FSSTPIESEDSRK-----IATPD---------EHKAFIEDICKKITRLIESD-------EQSLELEPCNAYLRKLIYQNVKSR------------FKSGIHLDTKIKDARERYIKVFKADVEQMKEMEVAKKSTE--LDELDEAVGFSKVIKMISKSEKLIVGHNMLLDLCHILHQFCSPLPVDFEEFKSLSKYVFPRILDTKLMASTQPLRDI-INTTTLGELQVLLEKN------------------------------PFVKPE---------IVTAPGFTGYNTSSEQLHEAGYDAYVTGICFVTMADHLGSLQDEEIK-ISVECPI---VEPFINKLFLMRVQDIPYINLNGEDELPPRTHVFHVK-FPKEWKTSDLVQLFQPFGS---VYVAWVDDNS 469 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig91.20529.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig91.20529.1 >prot_F-serratus_M_contig91.20529.1 ID=prot_F-serratus_M_contig91.20529.1|Name=mRNA_F-serratus_M_contig91.20529.1|organism=Fucus serratus male|type=polypeptide|length=623bp MNITRENFEDNFDTVCKAIRASHFVAVDAEFTGLRAPGMPKERMTDSVKAback to top mRNA from alignment at F-serratus_M_contig91:823971..829327- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig91.20529.1 ID=mRNA_F-serratus_M_contig91.20529.1|Name=mRNA_F-serratus_M_contig91.20529.1|organism=Fucus serratus male|type=mRNA|length=5357bp|location=Sequence derived from alignment at F-serratus_M_contig91:823971..829327- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig91:823971..829327- >mRNA_F-serratus_M_contig91.20529.1 ID=mRNA_F-serratus_M_contig91.20529.1|Name=mRNA_F-serratus_M_contig91.20529.1|organism=Fucus serratus male|type=CDS|length=3738bp|location=Sequence derived from alignment at F-serratus_M_contig91:823971..829327- (Fucus serratus male)back to top |