prot_F-serratus_M_contig91.20525.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig91.20525.1
Unique Nameprot_F-serratus_M_contig91.20525.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length118
Homology
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BLAST of mRNA_F-serratus_M_contig91.20525.1 vs. uniprot
Match: A0A6H5L5M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M4_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 5.100e-48
Identity = 76/115 (66.09%), Postives = 101/115 (87.83%), Query Frame = 0 
Query:    1 MDSHLLSHPDVRLFFYAFLLLLGIYVSVMCTCFGTLSIRKAKSLFREYENLQQRYDATFQRRDDVLHHIGGARNRGEHDQAALLEKQLARVDGDLDVLEQRLQNLDERHSNKRPK 115
            MDSHLL+HPDVR+  Y+FLLLLGIYVSVM TC+GT+S+ K K+ F+E ++L++ Y+AT QRR+D+L+HIGGA+ RGEH QAA+L+KQL RVDGDLD++E+RL++LD RH +KRPK
Sbjct:    1 MDSHLLAHPDVRVLLYSFLLLLGIYVSVMYTCWGTVSLSKVKAEFKERQDLERAYEATLQRREDMLYHIGGAQQRGEHQQAAVLDKQLLRVDGDLDLIEERLRDLDARHRSKRPK 115
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig91.20525.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L5M4_9PHAE5.100e-4866.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 41..61
NoneNo IPR availableCOILSCoilCoilcoord: 81..108
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 13..36
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 37..117
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..12
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig91contigF-serratus_M_contig91:777873..778613 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig91.20525.1mRNA_F-serratus_M_contig91.20525.1Fucus serratus malemRNAF-serratus_M_contig91 777426..778623 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig91.20525.1 ID=prot_F-serratus_M_contig91.20525.1|Name=mRNA_F-serratus_M_contig91.20525.1|organism=Fucus serratus male|type=polypeptide|length=118bp
MDSHLLSHPDVRLFFYAFLLLLGIYVSVMCTCFGTLSIRKAKSLFREYEN
LQQRYDATFQRRDDVLHHIGGARNRGEHDQAALLEKQLARVDGDLDVLEQ
RLQNLDERHSNKRPKKM*
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