prot_F-serratus_M_contig9.20344.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig9.20344.1
Unique Nameprot_F-serratus_M_contig9.20344.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length400
Homology
BLAST of mRNA_F-serratus_M_contig9.20344.1 vs. uniprot
Match: D8LN65_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN65_ECTSI)

HSP 1 Score: 219 bits (558), Expect = 4.460e-64
Identity = 147/385 (38.18%), Postives = 199/385 (51.69%), Query Frame = 0
Query:   76 LIVDKYDAELRTDRLPEDRETFWIAKYQPNGDRDEVRNQMYLRWK-DGRVFGLGFEKVRQLCKIKGQYKYNRASNQTVVAMTCKFSNEFDKVMFHGCSNGTSFMGNCYMHEIDRFSLVATIPGLRHTSACKFKGSFLLQKMEGMGDPSLRVRLHSRRVHKWAGDRFPDDTISPPTSPLYYRNERRPG--------------------EGYDSVDGDAASRGKSDGGASRSSRSRSRGRVKRALSRLNPFSRR----RRRRRHFGFDDPTLTPTDVRAEER------------EFPPWVQKGVDYDDDQEEDE---DPYGGSLSR-------------------GRLPISPGR--TPKGKPSLSPNDKLNYLEIEGIPGRSGPAMV 399
            L+  KY+  +RTD +PED+ET W  KYQPNG+R EV   MYLR++  G V G+G+E+ R+LCKI G+YK N  +NQT +A+ CKFSNE D V+FHG  NGT  +GNCY+ EID FS  + IPG+R  S  K+KGSFL+ K  GMG   LR  +H+RRVHKWAG  FPDD++  P SP+     R PG                     GY  V+G  ++RG    G  R   +RS  R     +     ++     ++ RR F    PTL   D++ ++R            E PPWV++G    ++ E  E     +GG   R                   G  P S  R  T  GK S  P    NYL++EG+   + P ++
Sbjct:    2 LVNSKYEDPIRTDSIPEDQETLWRVKYQPNGERSEVTQYMYLRFRRGGNVHGVGYEESRKLCKITGKYKLNARTNQTALALQCKFSNECDTVLFHGWGNGTGLVGNCYIREIDPFSAFSGIPGIRQLSRDKYKGSFLMLKQSGMGGAKLRSMVHTRRVHKWAGACFPDDSVPMPQSPM-----RSPGATPRSGITPKSSRGRGAGRENGYSPVEGQGSTRG----GRGRRGFARSTARPGSPATSQGGSNKSDSLGKKIRRLFHRKRPTL---DIQLQDRTSDWSTRGSTSGEVPPWVRQGTPGSEEAEMTELRGGYHGGHARRRTGYDDXXXXXXXXXGSMYGYSPSSTSRPSTAGGKRS-KPVQTANYLDLEGVRASTTPCLL 373          
BLAST of mRNA_F-serratus_M_contig9.20344.1 vs. uniprot
Match: A0A6H5KY23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY23_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 2.490e-52
Identity = 91/188 (48.40%), Postives = 117/188 (62.23%), Query Frame = 0
Query:    9 PSTVTILGFDIPTLYIAGA-AAVLAXXXXXXXXXXXCRKKTKIVASEQFIWPSSSRFLKKTDPGHPPKLIVDKYDAELRTDRLPEDRETFWIAKYQPNGDRDEVRNQMYLRWKDGRVFGLGFEKVRQLCKIKGQYKYNRASNQTVVAMTCKFSNEFDKVMFHGCSNGTSFMGNCYMHEIDRFSLVATI 195
            P TV + G D+PT  +A    A L            C  +     SE F WPSSSRFLK  DP +PPKL V++Y+  +RTD L  D E  WI  YQP+G R E+   MYLR+++G V+G+GFE+ R+ CKI G+YK N  +NQ  V MTC+FSN+ D VMFHG  NGT  +GNCY+ E+DRFS  + I
Sbjct:    8 PDTVNVFGVDVPTFALAVFFGAGLLAVCVFCCCSKHCGSEDP-PTSESFKWPSSSRFLKMVDPRNPPKLFVNRYEDPIRTDVLVLDEEANWIVTYQPSGGRHEIVQHMYLRFREGAVYGVGFEEGRKACKISGKYKRNEGANQMAVVMTCRFSNDVDTVMFHGSGNGTGLVGNCYIRELDRFSSFSQI 194          
BLAST of mRNA_F-serratus_M_contig9.20344.1 vs. uniprot
Match: D8LAZ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAZ0_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 1.830e-45
Identity = 87/190 (45.79%), Postives = 110/190 (57.89%), Query Frame = 0
Query:   61 SSRFLKKTDPGHPPKLIVDKYDAELRTDRLPEDRETFWIAKYQPNGDRDEVRNQMYLRWKDGRVFGLGFEKVRQLCKIKGQYKYNRASNQTVVAMTCKFSNEFDKVMFHGCSNGTSFMGNCYMHEIDRFSLVATIPGLRHTSACKFKGSFLLQKMEGMGDPSLRVRLHSRRVHKWAGDRFPDDTISPPTS 250
            SSRFLK  DP +PPKL V+KY+  +RTD L  D E  WI  YQP+G R EV   MYLR+++G V+G+GFE+ R+ CKI G+YK N  +NQ  V MTC+ S                                   PGLR+  A K+K SFL+ KMEG+GD  +R RLH+ RV KWAG+ +PDD I  P S
Sbjct:    3 SSRFLKTVDPRNPPKLFVNKYEDPIRTDVLVLDEEANWIVTYQPSGGRYEVVQHMYLRFREGAVYGVGFEEGRKACKISGKYKRNEGANQVAVVMTCRSS-----------------------------------PGLRNMGATKYKASFLMLKMEGIGDTHIRARLHTSRVQKWAGNLYPDDAIPLPAS 157          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig9.20344.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LN65_ECTSI4.460e-6438.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KY23_9PHAE2.490e-5248.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LAZ0_ECTSI1.830e-4545.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 42..399
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..41
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig9contigF-serratus_M_contig9:285792..311907 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig9.20344.1mRNA_F-serratus_M_contig9.20344.1Fucus serratus malemRNAF-serratus_M_contig9 285643..312317 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig9.20344.1 ID=prot_F-serratus_M_contig9.20344.1|Name=mRNA_F-serratus_M_contig9.20344.1|organism=Fucus serratus male|type=polypeptide|length=400bp
MSFLYDSFPSTVTILGFDIPTLYIAGAAAVLAILLCVCCYCRCCRKKTKI
VASEQFIWPSSSRFLKKTDPGHPPKLIVDKYDAELRTDRLPEDRETFWIA
KYQPNGDRDEVRNQMYLRWKDGRVFGLGFEKVRQLCKIKGQYKYNRASNQ
TVVAMTCKFSNEFDKVMFHGCSNGTSFMGNCYMHEIDRFSLVATIPGLRH
TSACKFKGSFLLQKMEGMGDPSLRVRLHSRRVHKWAGDRFPDDTISPPTS
PLYYRNERRPGEGYDSVDGDAASRGKSDGGASRSSRSRSRGRVKRALSRL
NPFSRRRRRRRHFGFDDPTLTPTDVRAEEREFPPWVQKGVDYDDDQEEDE
DPYGGSLSRGRLPISPGRTPKGKPSLSPNDKLNYLEIEGIPGRSGPAMV*
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