prot_F-serratus_M_contig871.20077.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig871.20077.1
Unique Nameprot_F-serratus_M_contig871.20077.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length123
Homology
BLAST of mRNA_F-serratus_M_contig871.20077.1 vs. uniprot
Match: A0A6H5KD60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD60_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 1.080e-25
Identity = 58/123 (47.15%), Postives = 78/123 (63.41%), Query Frame = 0
Query:    1 MWTATMTRPDIACAVCAVARFCENPGPAHNEAVMKIFQCLLHTKEWGIMYG-GQGCGLCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLR 122
            MW AT TRP+IA A  AVAR+C +P   H  A + I   ++ T + GI +G G   GL ME + D+D  +    RRSVSG  +M  +G ISW SR Q+     T+EAEYV+L++V+K+VLFLR
Sbjct:   80 MWLATQTRPNIANAARAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFGRGSVAGLSMEVFADADYASKAADRRSVSGGFVMCGRGCISWFSRTQQCVTLSTTEAEYVSLADVMKEVLFLR 202          
BLAST of mRNA_F-serratus_M_contig871.20077.1 vs. uniprot
Match: A0A6H5L0Z9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Z9_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 3.720e-25
Identity = 60/123 (48.78%), Postives = 78/123 (63.41%), Query Frame = 0
Query:    1 MWTATMTRPDIACAVCAVARFCENPGPAHNEAVMKIFQCLLHTKEWGIMYG-GQGCGLCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLR 122
            MW AT TRPDIA AV AVAR+C +P   H  A + I   ++ T E GI +  G   GL ME + D+D  +    RRSVSG ++M   G ISW SR Q+     T+EAEYV+L++V+K+VLFLR
Sbjct:  166 MWLATQTRPDIANAVRAVARYCASPKEIHCRAGLGILGYVVRTSELGITFRRGSVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLR 288          
BLAST of mRNA_F-serratus_M_contig871.20077.1 vs. uniprot
Match: A0A6H5KEZ8_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEZ8_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 4.440e-25
Identity = 59/123 (47.97%), Postives = 73/123 (59.35%), Query Frame = 0
Query:    1 MWTATMTRPDIACAVCAVARFCENPGPAHNEAVMKIFQCLLHTKEWGIMYG-GQGCGLCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLR 122
            MW AT TRPDIA AV AVAR+C +P   H  A M I      T  +GI +  G   G  ++ Y D+D  +    RRSVSG ++    GA+SW SR Q+     T+EAEYVAL EVVK +LFLR
Sbjct:    3 MWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGEVVKVILFLR 125          
BLAST of mRNA_F-serratus_M_contig871.20077.1 vs. uniprot
Match: A0A6H5JTK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK6_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 5.000e-25
Identity = 58/123 (47.15%), Postives = 78/123 (63.41%), Query Frame = 0
Query:    1 MWTATMTRPDIACAVCAVARFCENPGPAHNEAVMKIFQCLLHTKEWGIMYG-GQGCGLCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLR 122
            MW AT TRPDIA AV AVAR+C +P   H  A + I   ++ T + GI +  G   GL ME + D+D  +    RRSVSG ++M   G +SW SR Q+     T+EAEYV+L++V+K+VLFLR
Sbjct:   41 MWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCMSWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLR 163          
BLAST of mRNA_F-serratus_M_contig871.20077.1 vs. uniprot
Match: A0A6H5KLT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLT9_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 5.360e-25
Identity = 59/123 (47.97%), Postives = 75/123 (60.98%), Query Frame = 0
Query:    1 MWTATMTRPDIACAVCAVARFCENPGPAHNEAVMKIFQCLLHTKEWGIMYG-GQGCGLCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLR 122
            MW AT TRPDIA AV AVAR+C +P   H  A M I      T  +GI +  G   GL ++ Y D+D  +    RRSVSG ++    GA+SW SR Q+     T+EAEYVAL +VVK++LFLR
Sbjct:  113 MWLATQTRPDIANAVRAVARYCASPTLVHWNAAMDILGDARRTSHFGISFQRGTVEGLSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLR 235          
BLAST of mRNA_F-serratus_M_contig871.20077.1 vs. uniprot
Match: A0A6H5KR24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR24_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 7.200e-25
Identity = 59/123 (47.97%), Postives = 78/123 (63.41%), Query Frame = 0
Query:    1 MWTATMTRPDIACAVCAVARFCENPGPAHNEAVMKIFQCLLHTKEWGIMYG-GQGCGLCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLR 122
            MW AT TRPDIA AV AVAR+C +P   H  A + I   ++ T + GI +  G   GL ME + D+D  +    RRSVSG ++M   G ISW SR Q+     T+EAEYV+L++V+K+VLFLR
Sbjct:  124 MWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDSGITFRRGSIAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLR 246          
BLAST of mRNA_F-serratus_M_contig871.20077.1 vs. uniprot
Match: A0A6H5JA71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA71_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 1.350e-24
Identity = 58/123 (47.15%), Postives = 76/123 (61.79%), Query Frame = 0
Query:    1 MWTATMTRPDIACAVCAVARFCENPGPAHNEAVMKIFQCLLHTKEWGIMYG-GQGCGLCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLR 122
            MW AT TRPDIA AV AVAR+C +P      A + I   ++ T + GI +  G   GL ME + D+D  +    RRSVSG ++M   G I W SR Q+     T+EAEYV+L++V+KDVLFLR
Sbjct:   80 MWLATQTRPDIANAVRAVARYCASPKEIDCRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCIPWFSRTQKCVTLSTTEAEYVSLADVMKDVLFLR 202          
BLAST of mRNA_F-serratus_M_contig871.20077.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 1.400e-24
Identity = 59/123 (47.97%), Postives = 78/123 (63.41%), Query Frame = 0
Query:    1 MWTATMTRPDIACAVCAVARFCENPGPAHNEAVMKIFQCLLHTKEWGIMYG-GQGCGLCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLR 122
            MW AT TRPDIA AV AVAR+C +P   H  A + I   ++ T + GI +  G   GL ME + D+D  +    RRSVSG ++M   G ISW SR Q+     T+EAEYV+L++V+K+VLFLR
Sbjct:  225 MWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLR 347          
BLAST of mRNA_F-serratus_M_contig871.20077.1 vs. uniprot
Match: A0A6A3MW41_9STRA (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MW41_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.710e-24
Identity = 56/122 (45.90%), Postives = 80/122 (65.57%), Query Frame = 0
Query:    1 MWTATMTRPDIACAVCAVARFCENPGPAHNEAVMKIFQCLLHTKEWGIMYGGQGCGLCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLR 122
            M+ A  TRPDI+ AV  ++RF ENPG  H +A +K+ + LL TK+ GI+Y G   G  +EAY+D+D     D RRSVSG +LML    + W S  Q+  A  ++EAEY+ALS+ VK+ +++R
Sbjct:   14 MYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMR 134          
BLAST of mRNA_F-serratus_M_contig871.20077.1 vs. uniprot
Match: A0A6H5KRB4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRB4_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 1.740e-24
Identity = 58/123 (47.15%), Postives = 74/123 (60.16%), Query Frame = 0
Query:    1 MWTATMTRPDIACAVCAVARFCENPGPAHNEAVMKIFQCLLHTKEWGIMYG-GQGCGLCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLR 122
            MW AT TRPDIA AV AVAR+C +P   H  A M I      T  +GI +  G   G  ++ Y D+D  +    RRSVSG ++    GA+SW SR Q+     T+EAEYVAL +VVK++LFLR
Sbjct:  107 MWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLR 229          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig871.20077.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KD60_9PHAE1.080e-2547.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0Z9_9PHAE3.720e-2548.78Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KEZ8_9PHAE4.440e-2547.97Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTK6_9PHAE5.000e-2547.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLT9_9PHAE5.360e-2547.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KR24_9PHAE7.200e-2547.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JA71_9PHAE1.350e-2447.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLN0_9PHAE1.400e-2447.97Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A3MW41_9STRA1.710e-2445.90Uncharacterized protein n=14 Tax=Phytophthora TaxI... [more]
A0A6H5KRB4_9PHAE1.740e-2447.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 5..122
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 5..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig871contigF-serratus_M_contig871:98443..98811 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig871.20077.1mRNA_F-serratus_M_contig871.20077.1Fucus serratus malemRNAF-serratus_M_contig871 98212..98811 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig871.20077.1 ID=prot_F-serratus_M_contig871.20077.1|Name=mRNA_F-serratus_M_contig871.20077.1|organism=Fucus serratus male|type=polypeptide|length=123bp
MWTATMTRPDIACAVCAVARFCENPGPAHNEAVMKIFQCLLHTKEWGIMY
GGQGCGLCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTA
SGTSEAEYVALSEVVKDVLFLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like