mRNA_F-serratus_M_contig871.20077.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig871.20077.1 vs. uniprot
Match: A0A6H5KEZ8_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEZ8_9PHAE) HSP 1 Score: 162 bits (411), Expect = 4.760e-47 Identity = 90/198 (45.45%), Postives = 122/198 (61.62%), Query Frame = 1
Query: 1 MWTATMTRPDIACAVCAVARFCENPGPAHNEAVMKIFQCLLHTKEWGIMYG-GQGCGLCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLR*VQEFMEPSMGVGAVNVFEDNEGAVKLATNKHTSRRTKRIDVKHHLVRDASDAQRVRVVYVRSEDQHADLLTKPL 591
MW AT TRPDIA AV AVAR+C +P H A M I T +GI + G G ++ Y D+D + RRSVSG ++ GA+SW SR Q+ T+EAEYVAL EVVK +LFLR + FM P +G+ + VFEDN+GA++LA N ++ +K IDV+HH +R+ + + + V++V S Q AD LTK L
Sbjct: 3 MWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGEVVKVILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSL 200
BLAST of mRNA_F-serratus_M_contig871.20077.1 vs. uniprot
Match: A0A6H5KD60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD60_9PHAE) HSP 1 Score: 165 bits (417), Expect = 5.620e-47 Identity = 89/198 (44.95%), Postives = 123/198 (62.12%), Query Frame = 1
Query: 1 MWTATMTRPDIACAVCAVARFCENPGPAHNEAVMKIFQCLLHTKEWGIMYG-GQGCGLCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLR*VQEFMEPSMGVGAVNVFEDNEGAVKLATNKHTSRRTKRIDVKHHLVRDASDAQRVRVVYVRSEDQHADLLTKPL 591
MW AT TRP+IA A AVAR+C +P H A + I ++ T + GI +G G GL ME + D+D + RRSVSG +M +G ISW SR Q+ T+EAEYV+L++V+K+VLFLR V FM P G+ + VFEDN+GA++LA N ++ +K DV+HH + + + + + YV S QHAD LTK L
Sbjct: 80 MWLATQTRPNIANAARAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFGRGSVAGLSMEVFADADYASKAADRRSVSGGFVMCGRGCISWFSRTQQCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHFDVRHHFIGELVGRKEISIFYVESAYQHADFLTKAL 277
BLAST of mRNA_F-serratus_M_contig871.20077.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 166 bits (421), Expect = 3.870e-46 Identity = 91/198 (45.96%), Postives = 125/198 (63.13%), Query Frame = 1
Query: 1 MWTATMTRPDIACAVCAVARFCENPGPAHNEAVMKIFQCLLHTKEWGIMYG-GQGCGLCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLR*VQEFMEPSMGVGAVNVFEDNEGAVKLATNKHTSRRTKRIDVKHHLVRDASDAQRVRVVYVRSEDQHADLLTKPL 591
MW AT TRPDIA AV AVAR+C +P H A + I ++ T + GI + G GL ME + D+D + RRSVSG ++M G ISW SR Q+ T+EAEYV+L++V+K+VLFLR V FM P G+ + VFEDN+GA++LA N ++ +K IDV+HH +R+ + + + +V S QHAD LTK L
Sbjct: 225 MWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKAL 422
BLAST of mRNA_F-serratus_M_contig871.20077.1 vs. uniprot
Match: A0A6H5JTK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK6_9PHAE) HSP 1 Score: 162 bits (410), Expect = 4.960e-46 Identity = 88/199 (44.22%), Postives = 126/199 (63.32%), Query Frame = 1
Query: 1 MWTATMTRPDIACAVCAVARFCENPGPAHNEAVMKIFQCLLHTKEWGIMYG-GQGCGLCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLR*VQEFMEPSMGVGAVNVFEDNEGAVKLATNKHTSRRTKRIDVKHHLVRDASDAQRVRVVYVRSEDQHADLLTKPLD 594
MW AT TRPDIA AV AVAR+C +P H A + I ++ T + GI + G GL ME + D+D + RRSVSG ++M G +SW SR Q+ T+EAEYV+L++V+K+VLFLR V+ F+ P G+ + V EDN+GA++LA N ++ +K IDV+HH +R+ + + + +V S QHAD LTK L+
Sbjct: 41 MWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCMSWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVRRFVLPEAGMPCIPVLEDNQGAIQLAQNPISNSTSKHIDVRHHFIRELVRRKEISIFHVESAYQHADFLTKALN 239
BLAST of mRNA_F-serratus_M_contig871.20077.1 vs. uniprot
Match: A0A6H5KLT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLT9_9PHAE) HSP 1 Score: 162 bits (410), Expect = 9.040e-46 Identity = 90/198 (45.45%), Postives = 123/198 (62.12%), Query Frame = 1
Query: 1 MWTATMTRPDIACAVCAVARFCENPGPAHNEAVMKIFQCLLHTKEWGIMYG-GQGCGLCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLR*VQEFMEPSMGVGAVNVFEDNEGAVKLATNKHTSRRTKRIDVKHHLVRDASDAQRVRVVYVRSEDQHADLLTKPL 591
MW AT TRPDIA AV AVAR+C +P H A M I T +GI + G GL ++ Y D+D + RRSVSG ++ GA+SW SR Q+ T+EAEYVAL +VVK++LFLR + FM P +G+ VFEDN+GA++LA N ++ +K IDV+HH +R+ + + + V++V S Q AD LTK L
Sbjct: 113 MWLATQTRPDIANAVRAVARYCASPTLVHWNAAMDILGDARRTSHFGISFQRGTVEGLSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCNPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSL 310
BLAST of mRNA_F-serratus_M_contig871.20077.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE) HSP 1 Score: 166 bits (421), Expect = 6.070e-45 Identity = 91/198 (45.96%), Postives = 125/198 (63.13%), Query Frame = 1
Query: 1 MWTATMTRPDIACAVCAVARFCENPGPAHNEAVMKIFQCLLHTKEWGIMYG-GQGCGLCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLR*VQEFMEPSMGVGAVNVFEDNEGAVKLATNKHTSRRTKRIDVKHHLVRDASDAQRVRVVYVRSEDQHADLLTKPL 591
MW AT TRPDIA AV AVAR+C +P H A + I ++ T + GI + G GL ME + D+D + RRSVSG ++M G ISW SR Q+ T+EAEYV+L++V+K+VLFLR V FM P G+ + VFEDN+GA++LA N ++ +K IDV+HH +R+ + + + +V S QHAD LTK L
Sbjct: 399 MWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKAL 596
BLAST of mRNA_F-serratus_M_contig871.20077.1 vs. uniprot
Match: A0A6H5K8K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K2_9PHAE) HSP 1 Score: 160 bits (404), Expect = 7.700e-45 Identity = 87/198 (43.94%), Postives = 124/198 (62.63%), Query Frame = 1
Query: 1 MWTATMTRPDIACAVCAVARFCENPGPAHNEAVMKIFQCLLHTKEWGIMYG-GQGCGLCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLR*VQEFMEPSMGVGAVNVFEDNEGAVKLATNKHTSRRTKRIDVKHHLVRDASDAQRVRVVYVRSEDQHADLLTKPL 591
MW AT TRPDIA AV AVAR+C +P H +A + I + T GI + G G+ M+ + D+D RRSVSG ++M G ++W SR Q+ T+EAEYVA+++V+K+VLFLR V FM P G+ + VFEDN+GA+++A N T+ +K ID +HHL+R + + + + +V SE QHAD LTK +
Sbjct: 80 MWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYVRKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQVAHNPITNSNSKHIDERHHLIRKLVERKEISITHVTSEFQHADFLTKAI 277
BLAST of mRNA_F-serratus_M_contig871.20077.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE) HSP 1 Score: 163 bits (413), Expect = 9.190e-45 Identity = 89/198 (44.95%), Postives = 123/198 (62.12%), Query Frame = 1
Query: 1 MWTATMTRPDIACAVCAVARFCENPGPAHNEAVMKIFQCLLHTKEWGIMYG-GQGCGLCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLR*VQEFMEPSMGVGAVNVFEDNEGAVKLATNKHTSRRTKRIDVKHHLVRDASDAQRVRVVYVRSEDQHADLLTKPL 591
MW AT TRPDIA AV AVAR+C +P H A M I T +GI + G G ++ Y D+D + RRSVSG ++ GA+SW SR Q+ T+EAEYVAL +VVK++LFLR + FM P +G+ + VFEDN+GA++LA N ++ +K IDV+HH +R+ + + + V++V S Q AD LTK L
Sbjct: 249 MWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSL 446
BLAST of mRNA_F-serratus_M_contig871.20077.1 vs. uniprot
Match: A0A6H5KR24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR24_9PHAE) HSP 1 Score: 159 bits (403), Expect = 1.570e-44 Identity = 90/199 (45.23%), Postives = 125/199 (62.81%), Query Frame = 1
Query: 1 MWTATMTRPDIACAVCAVARFCENPGPAHNEAVMKIFQCLLHTKEWGIMYG-GQGCGLCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLR*VQEFMEPSMGVGAVNVFEDNEGAVKLATNKHTSRRTKRIDVKHHLVRDASDAQR-VRVVYVRSEDQHADLLTKPL 591
MW AT TRPDIA AV AVAR+C +P H A + I ++ T + GI + G GL ME + D+D + RRSVSG ++M G ISW SR Q+ T+EAEYV+L++V+K+VLFLR V FM P G+ + VFEDN+GA++LA N ++ K IDV+HH +R+ ++ + + +V S QHAD LT+ L
Sbjct: 124 MWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDSGITFRRGSIAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNLKHIDVRHHFIRELVVGRKEISIFHVESAYQHADFLTRAL 322
BLAST of mRNA_F-serratus_M_contig871.20077.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE) HSP 1 Score: 159 bits (402), Expect = 1.870e-44 Identity = 85/198 (42.93%), Postives = 124/198 (62.63%), Query Frame = 1
Query: 1 MWTATMTRPDIACAVCAVARFCENPGPAHNEAVMKIFQCLLHTKEWGIMYG-GQGCGLCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLR*VQEFMEPSMGVGAVNVFEDNEGAVKLATNKHTSRRTKRIDVKHHLVRDASDAQRVRVVYVRSEDQHADLLTKPL 591
MW AT TRPDIA AV AVAR+C +P H +A + I + T GI + G G+ M+ + D+D + RRSVSG ++M G ++W SR Q+ T+EAEYVA+++V+K+VLFLR V FM P G+ + VFEDN+GA+++A N T+ +K IDV+HH +R+ + + + + V + QHAD LTK +
Sbjct: 108 MWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITNVPTPFQHADFLTKAI 305 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig871.20077.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig871.20077.1 >prot_F-serratus_M_contig871.20077.1 ID=prot_F-serratus_M_contig871.20077.1|Name=mRNA_F-serratus_M_contig871.20077.1|organism=Fucus serratus male|type=polypeptide|length=123bp MWTATMTRPDIACAVCAVARFCENPGPAHNEAVMKIFQCLLHTKEWGIMYback to top mRNA from alignment at F-serratus_M_contig871:98212..98811- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig871.20077.1 ID=mRNA_F-serratus_M_contig871.20077.1|Name=mRNA_F-serratus_M_contig871.20077.1|organism=Fucus serratus male|type=mRNA|length=600bp|location=Sequence derived from alignment at F-serratus_M_contig871:98212..98811- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig871:98212..98811- >mRNA_F-serratus_M_contig871.20077.1 ID=mRNA_F-serratus_M_contig871.20077.1|Name=mRNA_F-serratus_M_contig871.20077.1|organism=Fucus serratus male|type=CDS|length=738bp|location=Sequence derived from alignment at F-serratus_M_contig871:98212..98811- (Fucus serratus male)back to top |