prot_F-serratus_M_contig864.20015.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig864.20015.1
Unique Nameprot_F-serratus_M_contig864.20015.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length331
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig864.20015.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002423Chaperonin Cpn60/TCP-1 familyPFAMPF00118Cpn60_TCP1coord: 23..137
e-value: 1.0E-11
score: 44.2
IPR027413GroEL-like equatorial domain superfamilyGENE3D1.10.560.10coord: 19..134
e-value: 7.4E-12
score: 46.8
IPR027413GroEL-like equatorial domain superfamilySUPERFAMILY48592GroEL equatorial domain-likecoord: 16..141
NoneNo IPR availablePANTHERPTHR46883FAMILY NOT NAMEDcoord: 17..144
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..331
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig864contigF-serratus_M_contig864:104158..106233 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig864.20015.1mRNA_F-serratus_M_contig864.20015.1Fucus serratus malemRNAF-serratus_M_contig864 104158..106284 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig864.20015.1 ID=prot_F-serratus_M_contig864.20015.1|Name=mRNA_F-serratus_M_contig864.20015.1|organism=Fucus serratus male|type=polypeptide|length=331bp
MDQSRSILTSIGQPLLVVSVLGKSLGTLLGPTEATKMVQTGLSGCECNVI
SSSPTVLLRAMDIVHPVGTIFLQTLEGAEEAYGTGSTYLAALCGTLSTAC
SHIQLQGVPANAIINGLRVAEDLCTGVLRDLSVPIKDVARGLQEASINST
SKGFRRGDGDIDDLEDKQQHREFSRNKSGVAFLTVLAAGLHHNASSGGAV
RTHERTEEETPVLQGLSLPAALAVDALSALGIPNVSGEESTAANDVAQLA
RVCTRLLVGPDSASSFVAPGAAVIDILPEERAEVGEAFARRRGSNVKQSG
KHQRVLPLPRAVATVFIEAVVVVLGDLSASA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002423Cpn60/TCP-1
IPR027413GROEL-like_equatorial_sf