prot_F-serratus_M_contig86.19985.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig86.19985.1
Unique Name	prot_F-serratus_M_contig86.19985.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	123

Homology

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BLAST of mRNA_F-serratus_M_contig86.19985.1 vs. uniprot
Match: A0A6H5L1V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V4_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 3.820e-25
Identity = 63/104 (60.58%), Postives = 71/104 (68.27%), Query Frame = 0

Query:    6 VLPAGLAEVMWRVARASMGARDWDTAILALRGL-ATDREREGNRSRR--FCYYFATFP-GKNAPGPSPGPGLARVLRALVYCQLRRGLFREALETTRVVLGEGN 105
            VLP  LAEVMWRVARASM ARDW TAILAL GL A +    G  S R    YYFA+F  G  A     GPG ARVLRAL Y Q++RGL+R+ALET   VLG+G+
Sbjct:  646 VLPVALAEVMWRVARASMAARDWPTAILALEGLVAAEATAGGEASPREGLAYYFASFAKGGGARASRRGPGRARVLRALAYSQIQRGLYRDALETVGTVLGDGS 749

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BLAST of mRNA_F-serratus_M_contig86.19985.1 vs. uniprot
Match: D7FTU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU3_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 1.140e-23
Identity = 60/104 (57.69%), Postives = 72/104 (69.23%), Query Frame = 0

Query:    6 VLPAGLAEVMWRVARASMGARDWDTAILALRGL-ATDREREGNRSRR--FCYYFATFPGKNAPGPSP-GPGLARVLRALVYCQLRRGLFREALETTRVVLGEGN 105
            VLP   AEVMWRVARASM A+DW TAILAL GL A +   +G  S R    YYFA+F        S  GPG ARVLRAL + Q++RGL+R+ALET R+VLG+G+
Sbjct:  622 VLPVAPAEVMWRVARASMAAKDWPTAILALEGLVAAEATADGVASSREGLAYYFASFAKDGGARASRRGPGRARVLRALAFSQIQRGLYRDALETVRMVLGDGS 725

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig86.19985.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig86.19985.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5L1V4_9PHAE	3.820e-25	60.58	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FTU3_ECTSI	1.140e-23	57.69	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..5
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 22..123
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 6..16
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..21

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig86	contig	F-serratus_M_contig86:483366..484577 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig86.19985.1	mRNA_F-serratus_M_contig86.19985.1	Fucus serratus male	mRNA	F-serratus_M_contig86 483353..484577 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig86.19985.1 ID=prot_F-serratus_M_contig86.19985.1|Name=mRNA_F-serratus_M_contig86.19985.1|organism=Fucus serratus male|type=polypeptide|length=123bp
MARKMVLPAGLAEVMWRVARASMGARDWDTAILALRGLATDREREGNRSR
RFCYYFATFPGKNAPGPSPGPGLARVLRALVYCQLRRGLFREALETTRVV
LGEGNCQEESRLAGEDAAMLMFR