prot_F-serratus_M_contig824.19642.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig824.19642.1
Unique Nameprot_F-serratus_M_contig824.19642.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length93
Homology
BLAST of mRNA_F-serratus_M_contig824.19642.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 4.080e-20
Identity = 42/74 (56.76%), Postives = 53/74 (71.62%), Query Frame = 0
Query:    7 RALVGSLMWLAVMTRPDIANALRPCSRHSHNPSPRHWKALLQVASYVNATKEIGLRFVRGSGLRLSVYADADYA 80
            R  +G LMW A  TRPDIA AL    R++H P+ R WKAL+Q+ SY+NAT ++G+ +VRGSGL L VY DA YA
Sbjct: 1027 RQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGSGLDLEVYVDASYA 1100          
BLAST of mRNA_F-serratus_M_contig824.19642.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 4.120e-20
Identity = 42/74 (56.76%), Postives = 53/74 (71.62%), Query Frame = 0
Query:    7 RALVGSLMWLAVMTRPDIANALRPCSRHSHNPSPRHWKALLQVASYVNATKEIGLRFVRGSGLRLSVYADADYA 80
            R  +G LMW A  TRPDIA AL    R++H P+ R WKAL+Q+ SY+NAT ++G+ +VRGSGL L VY DA YA
Sbjct: 1580 RQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGSGLDLEVYVDASYA 1653          
BLAST of mRNA_F-serratus_M_contig824.19642.1 vs. uniprot
Match: A0A6H5KXX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX2_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 4.870e-19
Identity = 33/74 (44.59%), Postives = 56/74 (75.68%), Query Frame = 0
Query:    7 RALVGSLMWLAVMTRPDIANALRPCSRHSHNPSPRHWKALLQVASYVNATKEIGLRFVRGSGLRLSVYADADYA 80
            R ++GS+MW++  +RPD++ A+R  +RH+H PS RHW A+ ++  Y+  T+++G+ + +GSGLRL+VY +A YA
Sbjct:   36 REVIGSMMWVSTFSRPDVSFAVRAVARHAHAPSKRHWDAIQKILGYLQGTRDLGITYQQGSGLRLAVYVNASYA 109          
BLAST of mRNA_F-serratus_M_contig824.19642.1 vs. uniprot
Match: A0A6H5JTK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK6_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 2.470e-18
Identity = 41/78 (52.56%), Postives = 55/78 (70.51%), Query Frame = 0
Query:    6 YRALVGSLMWLAVMTRPDIANALRPCSRHSHNPSPRHWKALLQVASYVNATKEIGLRFVRGS--GLRLSVYADADYAA 81
            +R L+GSLMWLA  TRPDIANA+R  +R+  +P   HW+A L +  YV  T ++G+ F RGS  GL + V+ADADYA+
Sbjct:   33 FRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFADADYAS 110          
BLAST of mRNA_F-serratus_M_contig824.19642.1 vs. uniprot
Match: A0A6H5KY90_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY90_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 1.080e-17
Identity = 41/78 (52.56%), Postives = 55/78 (70.51%), Query Frame = 0
Query:    6 YRALVGSLMWLAVMTRPDIANALRPCSRHSHNPSPRHWKALLQVASYVNATKEIGLRFVRGS--GLRLSVYADADYAA 81
            +R L+GSLMWLA  TRPDIANA+R  +R+  +P   HW+A L +  YV  T ++G+ F RGS  GL + V+ADADYA+
Sbjct:  530 FRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGISFRRGSVAGLSMEVFADADYAS 607          
BLAST of mRNA_F-serratus_M_contig824.19642.1 vs. uniprot
Match: A0A6H5KR24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR24_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 1.520e-17
Identity = 41/78 (52.56%), Postives = 54/78 (69.23%), Query Frame = 0
Query:    6 YRALVGSLMWLAVMTRPDIANALRPCSRHSHNPSPRHWKALLQVASYVNATKEIGLRFVRGS--GLRLSVYADADYAA 81
            +R L+GSLMWLA  TRPDIANA+R  +R+  +P   HW+A L +  YV  T + G+ F RGS  GL + V+ADADYA+
Sbjct:  116 FRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDSGITFRRGSIAGLSMEVFADADYAS 193          
BLAST of mRNA_F-serratus_M_contig824.19642.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 1.970e-17
Identity = 40/78 (51.28%), Postives = 53/78 (67.95%), Query Frame = 0
Query:    6 YRALVGSLMWLAVMTRPDIANALRPCSRHSHNPSPRHWKALLQVASYVNATKEIGLRFVRG--SGLRLSVYADADYAA 81
            +R LVGSLMWLA  TRPDIANA+R  +R+  +P   HWKA L +  YV  T  +G+ F RG  +G+ + V+ DADYA+
Sbjct:  100 FRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYAS 177          
BLAST of mRNA_F-serratus_M_contig824.19642.1 vs. uniprot
Match: A0A6H5KD60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD60_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 2.870e-17
Identity = 40/78 (51.28%), Postives = 54/78 (69.23%), Query Frame = 0
Query:    6 YRALVGSLMWLAVMTRPDIANALRPCSRHSHNPSPRHWKALLQVASYVNATKEIGLRFVRGS--GLRLSVYADADYAA 81
            +R L+GSLMWLA  TRP+IANA R  +R+  +P   HW+A L +  YV  T ++G+ F RGS  GL + V+ADADYA+
Sbjct:   72 FRELIGSLMWLATQTRPNIANAARAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFGRGSVAGLSMEVFADADYAS 149          
BLAST of mRNA_F-serratus_M_contig824.19642.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 3.060e-17
Identity = 40/78 (51.28%), Postives = 54/78 (69.23%), Query Frame = 0
Query:    6 YRALVGSLMWLAVMTRPDIANALRPCSRHSHNPSPRHWKALLQVASYVNATKEIGLRFVRGS--GLRLSVYADADYAA 81
            +R L+GSLMWLA  TRPDIANA+R  +R+  +P   HW+A L +  YV  T ++G+ F RGS  GL + V+ DADYA+
Sbjct:  217 FRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYAS 294          
BLAST of mRNA_F-serratus_M_contig824.19642.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 3.140e-17
Identity = 40/78 (51.28%), Postives = 53/78 (67.95%), Query Frame = 0
Query:    6 YRALVGSLMWLAVMTRPDIANALRPCSRHSHNPSPRHWKALLQVASYVNATKEIGLRFVRG--SGLRLSVYADADYAA 81
            +R LVGSLMWLA  TRPDIANA+R  +R+  +P   HWKA L +  YV  T  +G+ F RG  +G+ + V+ DADYA+
Sbjct:  155 FRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYAS 232          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig824.19642.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JKS3_9PHAE4.080e-2056.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L175_9PHAE4.120e-2056.76Uncharacterized protein n=9 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXX2_9PHAE4.870e-1944.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTK6_9PHAE2.470e-1852.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY90_9PHAE1.080e-1752.56Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KR24_9PHAE1.520e-1752.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KP70_9PHAE1.970e-1751.28Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KD60_9PHAE2.870e-1751.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLN0_9PHAE3.060e-1751.28Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L4G9_9PHAE3.140e-1751.28Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 6..81
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..93
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 6..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig824contigF-serratus_M_contig824:281982..282260 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig824.19642.1mRNA_F-serratus_M_contig824.19642.1Fucus serratus malemRNAF-serratus_M_contig824 281982..282260 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig824.19642.1 ID=prot_F-serratus_M_contig824.19642.1|Name=mRNA_F-serratus_M_contig824.19642.1|organism=Fucus serratus male|type=polypeptide|length=93bp
EEFPKYRALVGSLMWLAVMTRPDIANALRPCSRHSHNPSPRHWKALLQVA
SYVNATKEIGLRFVRGSGLRLSVYADADYAAMVRGLCHDSSFI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like