prot_F-serratus_M_contig812.19522.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig812.19522.1
Unique Nameprot_F-serratus_M_contig812.19522.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length144
Homology
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BLAST of mRNA_F-serratus_M_contig812.19522.1 vs. uniprot
Match: A0A6H5K7N2_9PHAE (LysM domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7N2_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 1.730e-13
Identity = 47/102 (46.08%), Postives = 54/102 (52.94%), Query Frame = 0 
Query:    1 MQWGAEGGVWYGDGNPGRGDMN-------GEGMDQDEQWGQQRAGAFGAPPRWSGVSH--VAADFVRPADALGPGLEEHLPFIVAHTLVKVLRDPMLSVHYQ 93
            +QWGAEGGVW+GDG               G+G     QWG                      A  + PADALG GLEEHLPF+V HT+VKVLRDP+LS HYQ
Sbjct: 2032 IQWGAEGGVWFGDGGXXXXXXXXXXXXXXGQG-----QWGXXXXXXXXXXXXXXXXXXXXAGAGIMLPADALGTGLEEHLPFMVTHTMVKVLRDPLLSAHYQ 2128
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig812.19522.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K7N2_9PHAE1.730e-1346.08LysM domain-containing protein (Fragment) n=1 Tax=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig812contigF-serratus_M_contig812:123566..124392 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig812.19522.1mRNA_F-serratus_M_contig812.19522.1Fucus serratus malemRNAF-serratus_M_contig812 123566..124401 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig812.19522.1 ID=prot_F-serratus_M_contig812.19522.1|Name=mRNA_F-serratus_M_contig812.19522.1|organism=Fucus serratus male|type=polypeptide|length=144bp
MQWGAEGGVWYGDGNPGRGDMNGEGMDQDEQWGQQRAGAFGAPPRWSGVS
HVAADFVRPADALGPGLEEHLPFIVAHTLVKVLRDPMLSVHYQSAVDTSV
KVCCGSGGGPRLTEFALHNTGGAFASGSFVGSLGPGIGIGGVVG
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