prot_F-serratus_M_contig800.19410.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig800.19410.1
Unique Nameprot_F-serratus_M_contig800.19410.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length476
Homology
BLAST of mRNA_F-serratus_M_contig800.19410.1 vs. uniprot
Match: A0A6H5KA59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA59_9PHAE)

HSP 1 Score: 282 bits (721), Expect = 1.250e-87
Identity = 149/323 (46.13%), Postives = 203/323 (62.85%), Query Frame = 0
Query:  112 VPLLNAKNLKQIKMAEGDRAGTSLLKWDEECVKRHLGAIADSVATQDELAGFVLMTGEQPLHFMRLAGVVEAPGLQQNVAQSCSMTFTSSDRLIFTQAKHSAEVGVPSMAFCHAFIPCFHDQWSSRTWSSFYASIHTSQILQVFVQQTLSTKYHSTGCACHDICSELCL-VGGYMRTDKGVDGATQTLGDYDPEGLMKQFDKTRHMRHALVVRYVDCATNSVRQTVAMAHPNIPASKLYEMVHSIEEKITLRAADWFKYKTLPTPLRAQAFQSLRTSTPLLKRRSYQLLVLVLFIVALSTFTFNVTAGVFMIIGILIALGGSY 433
            +P ++  + K ++M  G  A   L +WD EC  +HL AI DSV T D+L  F LM GE+ ++ + LAG+V+APGL  ++ Q C + FT+  RLIFTQA HSA VG+P M    + + C HD+WS RTW+++ A+I+ S++LQVFV Q LST Y ++ C  +DI   LC   GG M ++K +DG TQTLGD+DP   M ++DKTR MRHALV+RYVDCA++SV +T AMAHP++PAS+LYEM  SIE  IT+R  DW K K+LPT L A  F +                              + TA VFM+  +L+AL G+Y
Sbjct:    1 MPQIDPSSRKMLQMTSGVAA--DLEEWDIECATKHLDAIKDSVTTHDDLHEFTLMKGEKVVNALDLAGLVDAPGLFDDLTQRCRVVFTNKKRLIFTQANHSAVVGLPKMRCLASLLTCCHDRWSRRTWTAYCATINASEVLQVFVHQELSTSYQTSTCTFNDILEFLCCPTGGSMYSEKDIDGVTQTLGDHDPGDCMSRWDKTRFMRHALVIRYVDCASHSVLETRAMAHPSVPASQLYEMARSIEANITVRMTDWTKSKSLPTALDASRFDNSSPXXXXXXXXXXXXXXXXXXXXXXXXXAVDTTAAVFMVFAVLVALYGAY 321          
BLAST of mRNA_F-serratus_M_contig800.19410.1 vs. uniprot
Match: D7FWP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWP8_ECTSI)

HSP 1 Score: 273 bits (698), Expect = 8.570e-85
Identity = 139/311 (44.69%), Postives = 201/311 (64.63%), Query Frame = 0
Query:  166 MTGEQPLHFMRLAGVVEAPGLQQNVAQSCSMTFTSSDRLIFTQAKHSAEVGVPSMAFCHAFIPCFHDQWSSRTWSSFYASIHTSQILQVFVQQTLSTKYHSTGCACHDICSELCL-VGGYMRTDKGVDGATQTLGDYDPEGLMKQFDKTRHMRHALVVRYVDCATNSVRQTVAMAHPNIPASKLYEMVHSIEEKITLRAADWFKYKTLPTPLRAQAFQSLRTSTPLLKRRSYQLLVLVLFIVALSTFTFNVTAGVFMIIGILIALGGSYYKLAMVIAEASDLVP----ESGGILLPTTQGLGGVIFVIAFF 471
            M GE  ++ + LAG+ +APGL   V Q C + FT+  RL+FTQA HSAEVG+P M    + + CFHD+WS R W+S+YASI  S++LQVFVQQTL+T Y ++ C   D    LC   GG ++++K ++G TQTLGD+DP   M ++DKTR MRHALV+RY+DCA+NSV++T  MA  + PASKLYEM  +I+  IT++A +W  +K+LP PL AQ F++      L+K++ Y++LV +L +V+L  F  N TA VFM+I +  A+ G+Y      +  A          SG     +T   G  +++++FF
Sbjct:    1 MKGEHAVNVLDLAGMEDAPGLYDTVTQQCRVVFTNEKRLVFTQANHSAEVGLPKMNCLASLLTCFHDRWSRRKWTSYYASIKASEVLQVFVQQTLTTSYQTSTCTFTDFLDVLCCPTGGTLKSEKDINGVTQTLGDHDPGSCMTRWDKTRFMRHALVIRYLDCASNSVQETTLMALASTPASKLYEMARAIDTNITIKANNWLSHKSLPNPLAAQPFRNQTPPQALIKQKPYKILVFILLVVSLIFFAINPTAAVFMLIAVFAAVFGAYSGSKSPVMRARKSAGFGMFGSGSKTTVSTNAFGLAVYLLSFF 311          
BLAST of mRNA_F-serratus_M_contig800.19410.1 vs. uniprot
Match: D7FH32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH32_ECTSI)

HSP 1 Score: 270 bits (691), Expect = 5.670e-82
Identity = 168/414 (40.58%), Postives = 225/414 (54.35%), Query Frame = 0
Query:   69 GVPDSE--RVYFHSKDYPFAAEQFDRLEEARFNMNRDDLRSGGADVPL--LNAKNLKQIKMAEGDRAGTSLLKWDEECVKRHLGAIADSVATQDELAGFVLMTGEQPLHFMRLAGVVEAPGLQQNVAQSCSMTFTSSDRLIFTQAKHSAEVGVPSMAFCHAFIPCFHDQWSSRTWSSFYASIHTSQILQVFVQQTLSTKYHSTGCACHDICSELCL-VGGYMRTDKGVDGATQTLGDYDPEGLMKQFDKTRHMRHALVVRYVDCATNSVRQTVAMAHPNIPASKLYEMVHSIEEKITLRAADWFKYKTLPTPLRAQAFQSLRTSTPLLKRRSYQLLVLVLFIVALSTFTFNVTAGVFMIIGILIALGGSYYKLAMV---IAEASDLVPESGGILLPTTQGLGGVIFVIAFFSAL 474
            G P +E    YF +  YPF A QFDR  E     +       G D  +  ++  + K ++M  G  A   L KWD EC ++HL AI DSV T D+L  F  M GE+ ++ + LAG+ EAPG+   V Q C + FT+  RLIFTQ                                          +LQVFVQQ L+T Y ++ C  +DI   LC   GG M ++K + G TQTLGD+DP   M ++DKTRHMRHALV+RYVDCA+NSV++T AMAHP+IPAS+LYEM  SIE  IT+R ADW K K+LPT L A +F +   S PL KR+SY+ L+ +L IV+L  F  N TA VFM + +L AL G+Y         +  A   +  +       + G G  ++ ++FF  L
Sbjct:   92 GAPAAEVDEAYFFTDVYPFTAAQFDRERENLLGHHT------GLDPKMAQIDPSSRKMLQMTSGVAA--DLEKWDIECARKHLDAIKDSVTTHDDLHQFTFMKGEKVVNALDLAGLEEAPGVFDEVTQRCRVVFTNKKRLIFTQ------------------------------------------VLQVFVQQKLTTSYQTSTCTFNDILDFLCCPTGGTMYSEKNIHGVTQTLGDHDPGDCMSRWDKTRHMRHALVIRYVDCASNSVKETTAMAHPSIPASQLYEMARSIEANITIRTADWMKCKSLPTALNAGSFNNSPPSPPLFKRKSYKGLMFLLLIVSLIFFAVNPTAAVFMFLSVLAALFGAYSGSKTQQKRVRNAGSWILNAASKRTLGSNGAGAGVYALSFFLGL 455          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig800.19410.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KA59_9PHAE1.250e-8746.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWP8_ECTSI8.570e-8544.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FH32_ECTSI5.670e-8240.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 475..475
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 442..452
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 414..418
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 453..474
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..394
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 419..441
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 395..413
NoneNo IPR availableTMHMMTMhelixcoord: 398..432
NoneNo IPR availableTMHMMTMhelixcoord: 452..474

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig800contigF-serratus_M_contig800:172755..189956 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig800.19410.1mRNA_F-serratus_M_contig800.19410.1Fucus serratus malemRNAF-serratus_M_contig800 172608..191426 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig800.19410.1 ID=prot_F-serratus_M_contig800.19410.1|Name=mRNA_F-serratus_M_contig800.19410.1|organism=Fucus serratus male|type=polypeptide|length=476bp
MQDFGDRRNSEGNGTTSDSSSRPSLGGTGYTQGGRVSVAPTRTPPRHDDV
PRATVRRPAEALLVQVSNGVPDSERVYFHSKDYPFAAEQFDRLEEARFNM
NRDDLRSGGADVPLLNAKNLKQIKMAEGDRAGTSLLKWDEECVKRHLGAI
ADSVATQDELAGFVLMTGEQPLHFMRLAGVVEAPGLQQNVAQSCSMTFTS
SDRLIFTQAKHSAEVGVPSMAFCHAFIPCFHDQWSSRTWSSFYASIHTSQ
ILQVFVQQTLSTKYHSTGCACHDICSELCLVGGYMRTDKGVDGATQTLGD
YDPEGLMKQFDKTRHMRHALVVRYVDCATNSVRQTVAMAHPNIPASKLYE
MVHSIEEKITLRAADWFKYKTLPTPLRAQAFQSLRTSTPLLKRRSYQLLV
LVLFIVALSTFTFNVTAGVFMIIGILIALGGSYYKLAMVIAEASDLVPES
GGILLPTTQGLGGVIFVIAFFSALV*
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