mRNA_F-serratus_M_contig800.19410.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig800.19410.1 vs. uniprot
Match: A0A6H5KA59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA59_9PHAE) HSP 1 Score: 282 bits (721), Expect = 1.450e-82 Identity = 149/323 (46.13%), Postives = 203/323 (62.85%), Query Frame = 1
Query: 481 VPLLNAKNLKQIKMAEGDRAGTSLLKWDEECVKRHLGAIADSVATQDELAGFVLMTGEQPLHFMRLAGVVEAPGLQQNVAQSCSMTFTSSDRLIFTQAKHSAEVGVPSMAFCHAFIPCFHDQWSSRTWSSFYASIHTSQILQVFVQQTLSTKYHSTGCACHDICSELCL-VGGYMRTDKGVDGATQTLGDYDPEGLMKQFDKTRHMRHALVVRYVDCATNSVRQTVAMAHPNIPASKLYEMVHSIEEKITLRAADWFKYKTLPTPLRAQAFQSLRTSTPLLKRRSYQLLVLVLFIVALSTFTFNVTAGVFMIIGILIALGGSY 1446
+P ++ + K ++M G A L +WD EC +HL AI DSV T D+L F LM GE+ ++ + LAG+V+APGL ++ Q C + FT+ RLIFTQA HSA VG+P M + + C HD+WS RTW+++ A+I+ S++LQVFV Q LST Y ++ C +DI LC GG M ++K +DG TQTLGD+DP M ++DKTR MRHALV+RYVDCA++SV +T AMAHP++PAS+LYEM SIE IT+R DW K K+LPT L A F + + TA VFM+ +L+AL G+Y
Sbjct: 1 MPQIDPSSRKMLQMTSGVAA--DLEEWDIECATKHLDAIKDSVTTHDDLHEFTLMKGEKVVNALDLAGLVDAPGLFDDLTQRCRVVFTNKKRLIFTQANHSAVVGLPKMRCLASLLTCCHDRWSRRTWTAYCATINASEVLQVFVHQELSTSYQTSTCTFNDILEFLCCPTGGSMYSEKDIDGVTQTLGDHDPGDCMSRWDKTRFMRHALVIRYVDCASHSVLETRAMAHPSVPASQLYEMARSIEANITVRMTDWTKSKSLPTALDASRFDNSSPXXXXXXXXXXXXXXXXXXXXXXXXXAVDTTAAVFMVFAVLVALYGAY 321
BLAST of mRNA_F-serratus_M_contig800.19410.1 vs. uniprot
Match: D7FWP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWP8_ECTSI) HSP 1 Score: 273 bits (698), Expect = 6.740e-80 Identity = 139/311 (44.69%), Postives = 201/311 (64.63%), Query Frame = 1
Query: 643 MTGEQPLHFMRLAGVVEAPGLQQNVAQSCSMTFTSSDRLIFTQAKHSAEVGVPSMAFCHAFIPCFHDQWSSRTWSSFYASIHTSQILQVFVQQTLSTKYHSTGCACHDICSELCL-VGGYMRTDKGVDGATQTLGDYDPEGLMKQFDKTRHMRHALVVRYVDCATNSVRQTVAMAHPNIPASKLYEMVHSIEEKITLRAADWFKYKTLPTPLRAQAFQSLRTSTPLLKRRSYQLLVLVLFIVALSTFTFNVTAGVFMIIGILIALGGSYYKLAMVIAEASDLVP----ESGGILLPTTQGLGGVIFVIAFF 1560
M GE ++ + LAG+ +APGL V Q C + FT+ RL+FTQA HSAEVG+P M + + CFHD+WS R W+S+YASI S++LQVFVQQTL+T Y ++ C D LC GG ++++K ++G TQTLGD+DP M ++DKTR MRHALV+RY+DCA+NSV++T MA + PASKLYEM +I+ IT++A +W +K+LP PL AQ F++ L+K++ Y++LV +L +V+L F N TA VFM+I + A+ G+Y + A SG +T G +++++FF
Sbjct: 1 MKGEHAVNVLDLAGMEDAPGLYDTVTQQCRVVFTNEKRLVFTQANHSAEVGLPKMNCLASLLTCFHDRWSRRKWTSYYASIKASEVLQVFVQQTLTTSYQTSTCTFTDFLDVLCCPTGGTLKSEKDINGVTQTLGDHDPGSCMTRWDKTRFMRHALVIRYLDCASNSVQETTLMALASTPASKLYEMARAIDTNITIKANNWLSHKSLPNPLAAQPFRNQTPPQALIKQKPYKILVFILLVVSLIFFAINPTAAVFMLIAVFAAVFGAYSGSKSPVMRARKSAGFGMFGSGSKTTVSTNAFGLAVYLLSFF 311
BLAST of mRNA_F-serratus_M_contig800.19410.1 vs. uniprot
Match: D7FH32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH32_ECTSI) HSP 1 Score: 271 bits (692), Expect = 2.870e-77 Identity = 172/426 (40.38%), Postives = 230/426 (53.99%), Query Frame = 1
Query: 352 GVPDSE--RVYFHSKDYPFAAEQFDRLEEARFNMNRDDLRSGGADVPL--LNAKNLKQIKMAEGDRAGTSLLKWDEECVKRHLGAIADSVATQDELAGFVLMTGEQPLHFMRLAGVVEAPGLQQNVAQSCSMTFTSSDRLIFTQAKHSAEVGVPSMAFCHAFIPCFHDQWSSRTWSSFYASIHTSQILQVFVQQTLSTKYHSTGCACHDICSELCL-VGGYMRTDKGVDGATQTLGDYDPEGLMKQFDKTRHMRHALVVRYVDCATNSVRQTVAMAHPNIPASKLYEMVHSIEEKITLRAADWFKYKTLPTPLRAQAFQSLRTSTPLLKRRSYQLLVLVLFIVALSTFTFNVTAGVFMIIGILIALGGSYYKLAMV---IAEASDLVPESGGILLPTTQGLGGVIFVIAFFSALV*S*TSSITSLS 1605
G P +E YF + YPF A QFDR E + G D + ++ + K ++M G A L KWD EC ++HL AI DSV T D+L F M GE+ ++ + LAG+ EAPG+ V Q C + FT+ RLIFTQ +LQVFVQQ L+T Y ++ C +DI LC GG M ++K + G TQTLGD+DP M ++DKTRHMRHALV+RYVDCA+NSV++T AMAHP+IPAS+LYEM SIE IT+R ADW K K+LPT L A +F + S PL KR+SY+ L+ +L IV+L F N TA VFM + +L AL G+Y + A + + + G G ++ ++FF L + SS S S
Sbjct: 92 GAPAAEVDEAYFFTDVYPFTAAQFDRERENLLGHHT------GLDPKMAQIDPSSRKMLQMTSGVAA--DLEKWDIECARKHLDAIKDSVTTHDDLHQFTFMKGEKVVNALDLAGLEEAPGVFDEVTQRCRVVFTNKKRLIFTQ------------------------------------------VLQVFVQQKLTTSYQTSTCTFNDILDFLCCPTGGTMYSEKNIHGVTQTLGDHDPGDCMSRWDKTRHMRHALVIRYVDCASNSVKETTAMAHPSIPASQLYEMARSIEANITIRTADWMKCKSLPTALNAGSFNNSPPSPPLFKRKSYKGLMFLLLIVSLIFFAVNPTAAVFMFLSVLAALFGAYSGSKTQQKRVRNAGSWILNAASKRTLGSNGAGAGVYALSFFLGLQNTDGSSSQSAS 467 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig800.19410.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig800.19410.1 >prot_F-serratus_M_contig800.19410.1 ID=prot_F-serratus_M_contig800.19410.1|Name=mRNA_F-serratus_M_contig800.19410.1|organism=Fucus serratus male|type=polypeptide|length=476bp MQDFGDRRNSEGNGTTSDSSSRPSLGGTGYTQGGRVSVAPTRTPPRHDDVback to top mRNA from alignment at F-serratus_M_contig800:172608..191426+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig800.19410.1 ID=mRNA_F-serratus_M_contig800.19410.1|Name=mRNA_F-serratus_M_contig800.19410.1|organism=Fucus serratus male|type=mRNA|length=18819bp|location=Sequence derived from alignment at F-serratus_M_contig800:172608..191426+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig800:172608..191426+ >mRNA_F-serratus_M_contig800.19410.1 ID=mRNA_F-serratus_M_contig800.19410.1|Name=mRNA_F-serratus_M_contig800.19410.1|organism=Fucus serratus male|type=CDS|length=2856bp|location=Sequence derived from alignment at F-serratus_M_contig800:172608..191426+ (Fucus serratus male)back to top |