prot_F-serratus_M_contig791.19200.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig791.19200.1
Unique Nameprot_F-serratus_M_contig791.19200.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length229
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig791.19200.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 67..127
e-value: 6.0E-10
score: 39.1
coord: 156..193
e-value: 1.4E-4
score: 21.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 46..80
e-value: 2.6E-8
score: 31.5
coord: 82..115
e-value: 5.2E-10
score: 36.9
coord: 198..228
e-value: 1.8E-6
score: 25.8
coord: 118..143
e-value: 1.9E-4
score: 19.4
coord: 162..193
e-value: 8.6E-5
score: 20.5
coord: 11..45
e-value: 3.1E-11
score: 40.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 9..56
e-value: 9.6E-13
score: 48.1
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 198..227
e-value: 7.9E-4
score: 19.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 195..228
score: 11.115
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 9..43
score: 12.945
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 44..78
score: 11.904
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 79..113
score: 12.847
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 159..193
score: 11.082
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 114..148
score: 9.24
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..153
e-value: 6.1E-46
score: 159.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 154..228
e-value: 1.7E-16
score: 62.0
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 5..143
coord: 156..227

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig791contigF-serratus_M_contig791:137729..141131 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig791.19200.1mRNA_F-serratus_M_contig791.19200.1Fucus serratus malemRNAF-serratus_M_contig791 137729..141151 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig791.19200.1 ID=prot_F-serratus_M_contig791.19200.1|Name=mRNA_F-serratus_M_contig791.19200.1|organism=Fucus serratus male|type=polypeptide|length=229bp
MGDAGVARDCFSYNTAMHGYGRNGDWEKAIALLQDMRDNDVRPDIVSYST
VLAACGKAGEWQRGKTILEEMRADGIAPNVFSFGSLINACGKAGRWELAV
ETLDEMRASGLVPNEHNWSTAIDACGKAGEWQEALELLGQLEEAAATAGG
AGGQVLRLSTTMYNFVLEACARAGKWDRGAEILERMKGSTCAPPDARTYA
KVIEACAKGEKWEQAIRYLDEMREAGIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf