prot_F-serratus_M_contig643.17356.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig643.17356.1
Unique Nameprot_F-serratus_M_contig643.17356.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length141
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig643.17356.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 4..36
e-value: 950.0
score: 4.1
coord: 41..73
e-value: 0.022
score: 23.9
coord: 78..110
e-value: 0.22
score: 20.6
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 12..139
e-value: 2.8E-15
score: 56.0
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10coord: 3..140
e-value: 1.9E-23
score: 85.0
NoneNo IPR availablePANTHERPTHR13068:SF78MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEINcoord: 12..67
coord: 56..137
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 56..137
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 12..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig643contigF-serratus_M_contig643:271161..272153 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig643.17356.1mRNA_F-serratus_M_contig643.17356.1Fucus serratus malemRNAF-serratus_M_contig643 271160..272153 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig643.17356.1 ID=prot_F-serratus_M_contig643.17356.1|Name=mRNA_F-serratus_M_contig643.17356.1|organism=Fucus serratus male|type=polypeptide|length=141bp
ANTLQAHHTIAQVLNLSVERTLAAKIRWFEETLGMDRAEVTRMVTTLPCL
FGYRIEENMELKIAWLQDALGASRATALGMMVKWPGIFTCSIERNLQPTL
DFFRGDLDGGLEEVRKAVASSPRLLGASIEKRMRPRAARML
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
IPR038538MTERF_sf