prot_F-serratus_M_contig619.17003.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig619.17003.1
Unique Name	prot_F-serratus_M_contig619.17003.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	289

Homology

[Close]

BLAST of mRNA_F-serratus_M_contig619.17003.1 vs. uniprot
Match: A0A6H5K0I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0I6_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 3.890e-32
Identity = 94/166 (56.63%), Postives = 108/166 (65.06%), Query Frame = 0

Query:    1 MIGVLKA-------WR---WRGNE--RDPRKLARFSSPFASGEMAALGVVAGHAAAALRRLNHEPIQRQ--------GENDSASEKKQETAAMKEEVDSLREAMGQLSKSARGLVRQRDDARAELARAKGTLRRMVPALREVHDRQLGFRHYHDLIVNMSRRVLQE 146
            M+GVLKA       WR    RG+E  R P K       F+ GEMAAL VVAG AAAALRR+     +R+           D   E ++   A+KEE+  LREAM  LS SA+GL RQRD+ARA LARAKGTLRRMVPALRE  DRQLGFRHYHDLIVNMS+ VLQ+
Sbjct: 1077 MMGVLKASESWLLAWREQQHRGDEGHRPPDK------GFSGGEMAALAVVAGQAAAALRRVGAAASEREEVLQELDAXXADRVDETQKREEAVKEEMKHLREAMEHLSGSAKGLARQRDEARAALARAKGTLRRMVPALREARDRQLGFRHYHDLIVNMSKNVLQD 1236

[Close]

BLAST of mRNA_F-serratus_M_contig619.17003.1 vs. uniprot
Match: D7FQ01_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ01_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 1.360e-30
Identity = 123/309 (39.81%), Postives = 143/309 (46.28%), Query Frame = 0

Query:    7 AWR---WRGNE--RDPRKLARFSSPFASGEMAALGVVAGHAAAALRRLNHEPIQRQ--------GENDSASEKKQETAAMKEEVDSLREAMGQLSKSARGLVRQRDDARAELARAKGTLRRMVPALREVHDRQLGFRHYHDLIVNMSRRVLQE--------DPEETSVSLTPPLIGHSRHLRGRGGSGGG------SISNGXXXXXXXXXXXXXXXXXXXXXPSPT---AVTGEVGAA-------EAQRTRGGIGGAPT------FLPRHPDDRVFGSTVSGNGHRGVGGVKGGPSILNALRMTAGDGG 272
            AWR    RG+E  R P K       F+  EMAAL VVAG AAAALRR+     +R+           D   E ++   A+KEE+  LREAM  +S SA+GL RQRD+ARA LARAKGTLRRMVPALRE  DRQLGFRHYHDLIVNMS+ VLQ+        D E        P   H+     RGG G G        S G                     P  T   A+ G  G         +  R   G G AP         P  P D+   +          GG + GP IL  LR TA  GG
Sbjct:  572 AWREQQHRGDEGHRPPDK------GFSGREMAALAVVAGQAAAALRRVGAAASEREEVLEELDAXXADRVDETQKREEAVKEEMKHLREAMEHVSGSAKGLARQRDEARAALARAKGTLRRMVPALREARDRQLGFRHYHDLIVNMSKNVLQDGDGANPEADDERGRKGGVAPTPCHAD----RGGGGNGIHRCCRDASVGSHTRHNNNGSIGEDMGTRGNSPGATSTIAIFGSEGGGVSGIPGRQGPRLAAGGGSAPLSECGFKVSPSSPRDKAAAAVSFARSGDDGGGDRFGPEILTVLRETAAAGG 870

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig619.17003.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig619.17003.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5K0I6_9PHAE	3.890e-32	56.63	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FQ01_ECTSI	1.360e-30	39.81	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 91..111
None	No IPR available	COILS	Coil	Coil	coord: 63..83

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig619	contig	F-serratus_M_contig619:368674..370742 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig619.17003.1	mRNA_F-serratus_M_contig619.17003.1	Fucus serratus male	mRNA	F-serratus_M_contig619 368571..370829 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig619.17003.1 ID=prot_F-serratus_M_contig619.17003.1|Name=mRNA_F-serratus_M_contig619.17003.1|organism=Fucus serratus male|type=polypeptide|length=289bp
MIGVLKAWRWRGNERDPRKLARFSSPFASGEMAALGVVAGHAAAALRRLN
HEPIQRQGENDSASEKKQETAAMKEEVDSLREAMGQLSKSARGLVRQRDD
ARAELARAKGTLRRMVPALREVHDRQLGFRHYHDLIVNMSRRVLQEDPEE
TSVSLTPPLIGHSRHLRGRGGSGGGSISNGVGGGKRPDSRGASRRASPRR
SPSPTAVTGEVGAAEAQRTRGGIGGAPTFLPRHPDDRVFGSTVSGNGHRG
VGGVKGGPSILNALRMTAGDGGRGQKDGSSRSHERYRA*