prot_F-serratus_M_contig619.17002.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig619.17002.1
Unique Nameprot_F-serratus_M_contig619.17002.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length253
Homology
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BLAST of mRNA_F-serratus_M_contig619.17002.1 vs. uniprot
Match: A0A6H5K0I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0I6_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 5.080e-23
Identity = 91/230 (39.57%), Postives = 113/230 (49.13%), Query Frame = 0 
Query:   15 LEVLARVAQEATSAFSFASSVARVFSLVEEFVAMAVPLSRGHLLLLTGKPGGEVFSLEYDQTVKPEQDAIEVFFPIGDGLVGRCISTGLPCHAVGRDGGXXXXXXXRLSSRRALKNNAV--VTPSGPADLYGLLPPDSXXXXYPEVTSSVAGTLTFSTDTSTSTGSKLA---PGPDSASTMHRTPGS-------------LAAVPADARGRRRRLAFFPAED--VDSRSP 224
            LE +A V  EA +AFS ASS+  VF+LVE+FV+     SRG LLLL G+PGG +F LE D+   P+QD +E  FPIG+GLV RC++TGL         G         SSRR    +    V  +GPADL+ L   +      P   ++  G        S     K A   P PDSAST+   P S             +  V    RG  R LAFFPA D    SRSP
Sbjct:  752 LEAVAGVFVEAAAAFSTASSIPEVFTLVEDFVSEVAISSRGRLLLLNGEPGGGMFCLESDRRAPPDQDPLEASFPIGNGLVARCVATGLAFQTRRGGNGSTGGASPPRSSRRLYSTSGALDVALAGPADLHALPLQERYDPESPSHRAAENGAHAQPLSMSFQGWKKKAVTGPIPDSASTLLPPPASWNHRRSRSPDGSPVLGVGGSGRGPSR-LAFFPASDDCESSRSP 980
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BLAST of mRNA_F-serratus_M_contig619.17002.1 vs. uniprot
Match: D7FQ01_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ01_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 7.250e-22
Identity = 62/135 (45.93%), Postives = 79/135 (58.52%), Query Frame = 0 
Query:   15 LEVLARVAQEATSAFSFASSVARVFSLVEEFVAMAVPLSRGHLLLLTGKPGGEVFSLEYDQTVKPEQDAIEVFFPIGDGLVGRCISTGLPCHAVGRDGGXXXXXXXRLSSRRALKNNAV--VTPSGPADLYGLLP 147
            LE +A    EA +AFS ASS+  VF+LVE+FV+     SRG LLLL G+PGG +F LE D+   P+QD +E  FPIG+GLV RC++TGL         G         SSRR    +    V  +GPADL+ L P
Sbjct:  395 LEAMAGAFVEAAAAFSTASSIPEVFTLVEDFVSEVAVSSRGRLLLLNGEPGGGMFCLESDRRAPPDQDPLEASFPIGNGLVARCVATGLAFQTRRGGNGSTGGASPPRSSRRLYSTSGALDVALAGPADLHALPP 529
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig619.17002.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K0I6_9PHAE5.080e-2339.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQ01_ECTSI7.250e-2245.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig619contigF-serratus_M_contig619:366998..368544 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig619.17002.1mRNA_F-serratus_M_contig619.17002.1Fucus serratus malemRNAF-serratus_M_contig619 366998..368544 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig619.17002.1 ID=prot_F-serratus_M_contig619.17002.1|Name=mRNA_F-serratus_M_contig619.17002.1|organism=Fucus serratus male|type=polypeptide|length=253bp
VGGVEASEEWVSGALEVLARVAQEATSAFSFASSVARVFSLVEEFVAMAV
PLSRGHLLLLTGKPGGEVFSLEYDQTVKPEQDAIEVFFPIGDGLVGRCIS
TGLPCHAVGRDGGGGGGDGSRLSSRRALKNNAVVTPSGPADLYGLLPPDS
HHHHYPEVTSSVAGTLTFSTDTSTSTGSKLAPGPDSASTMHRTPGSLAAV
PADARGRRRRLAFFPAEDVDSRSPPPARASPRSQGLPKRRECMSPQASAG
ASG
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