prot_F-serratus_M_contig617.16970.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig617.16970.1
Unique Nameprot_F-serratus_M_contig617.16970.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length1035
Homology
BLAST of mRNA_F-serratus_M_contig617.16970.1 vs. uniprot
Match: A0A6H5L4C8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4C8_9PHAE)

HSP 1 Score: 714 bits (1844), Expect = 1.550e-231
Identity = 471/1046 (45.03%), Postives = 611/1046 (58.41%), Query Frame = 0
Query:   40 EGARRLKEQLLS-SQDESRSCLLEAAATAGWFSRAPQMPMSLMELIDSAWDDFERGLDSRRSITVDREAFEHAVRYQDLTGLSCLLSHGCGLSAPLIERLVEACGPRSVRDCMLEAAASARNPLVPALGLLKALVFA--EVSCPLHASWFSWMRAALEKLVLQVLANLPVSARALNKRVTPAGVTSIFGRVNSDASGVNSGGTSFGAGGCGPGGSSAVHRFRRPAAAGSLAGRT---------------------------------GAGAISGRRDHGGSGGVGSAASASSDGASKGKPSGAGFASGPKARESLFVAEWVFEPESRTIGMRKPSFEGPLAAALGMSWPAFISSPLVGDFLWAKFTAGIELGCLPTAKTPDQWYSNKEPPK--------------------LADSAAAXXXXXXXXXXXXXXXSSITAPSSEPHAEGEPRRSACPVCLRQMDNGEWDITVAPGLRAILVGAATKPEVFYGMPAAAAVFEAFIYVCMLVVYVLTIYRANPGPISILEVVLYVWVLGLCLKQVNESTGAAKKIVLAARGGAAEANRSRKGVRRRRWRWQGGMTATVLLAGALICRLVGLLQDPEGHDRVALAESSQEWTLFDLSLALLVVAAPLLLLHLLVSAAAFSPGLGPTVQAMTLMAREAAKVLPILACILFGCALALHVLYGEGSSLLEGTDFVSPLTGGAEYVDGFRTFGASCGTVLGAGLGVIRPPLDADVPYGEPLYIILYLFGAAVALGMVSILAGVLANSESADPVKMDQEFHLEKARAIVRATETCRQNGLPAPLNIAQWILSTIVSVVQPTRSPSSKRRAAKEACLIQGRLIFWILMGLPSVAAVIALDLVSLGCFWWISWSRVFEGPQNLPRVSLSLLGTSLWCILGSPLRLLFAWLTAARLVVRGDREGRLSGEAVRRTVLKGRAGGDYDLARLLKRTRWGGGSSRSVSERGCSVADIVASIDDPLSRGSRFKEALCC-DDDMPSTLGQIKALAKRNQESQGRTVERLKSLEGSLLVALARIESGLERGGRVQQ 1028
            EG+R LKEQLL+ S+D  +  +LE+ A AGW SR PQ+  +++EL+DSAWD+ ER +D R  ++ ++EAF+HAVR +DL GLSC+LSHG  LS  LIE LVE+CGPR VRDC LEA ASARNPLVP+LGLL ++  A  E SCPLHASWF  M+  LEKLV+QVL NLPVSARA NKR    G ++IF R+NS A  +NSG +  GAG                     + G +                                 G   + G     GSG  G +   +                  +A+ESL VAEWVFEPES  +GMR  +FEGPLA AL M W   + SPLV D LWAK TAG+EL        P Q    K   +                    + ++AA XXXXXXXXXXXXXXX++ T       A   P  S             WDIT+AP L+A+LVG A++P+VFY +PAA    +A +Y+ ML +Y + +YR  PG I   EV+LY+WVL +C  +V    G          G   +A+  R+         +GG  A  L             +D  G D V       EW  F   +AL   AAPLLL  LL   AAF P LGP V+A++L+AREA+KVLP LAC+L G ALALHV+YG+GS LLEGT+    L+GG  +VDGFRTFG SC TV  AG G I+ P D DVPYGEPLY++LY+F AA AL +VSI  GVL+N + A PV+M++ F L +AR IVRA E  R+N LP P N+AQ  L+ +VS  Q  R  S +R+A   AC + GR +FW+++G  +VA+ + L+L +L  FWW S  R+FE P+  PR+   LL T+L C + +PLRLL  W+ A   V++GD+ G+ +    R+ VLKGR GGDY L+ LL+RTRWG G   S   +G SV DIVA++DDPL RG  F+    C  D+ PST+ Q+KALAKRN E++ R  +RLK LE ++L  LAR+++  E   +VQQ
Sbjct:  715 EGSRLLKEQLLAGSEDREKGSILESVAMAGWLSRGPQLQPAVLELLDSAWDELERSVDDRLLVSAEQEAFQHAVRQRDLLGLSCVLSHGFRLSPVLIEGLVESCGPRCVRDCFLEAVASARNPLVPSLGLLSSVSTARKEASCPLHASWFLLMQNTLEKLVIQVLTNLPVSARAFNKRGIGGGRSNIFSRMNSFAP-MNSGSSMVGAGXXXXXXXXXXXXXXXXXHRRFVKGNSFNXXXXXXXXXXXXXXXXXXXXTNGTVTTGPHCGTVLLPGLGQEAGSGKAGDSRCGT-------------VIFNARAKESLLVAEWVFEPESEAVGMRGAAFEGPLALALQMGWTELVCSPLVLDLLWAKLTAGVELDVHSCGANPAQVPVEKRAREGRRGMLARSAPAPAVTAATPVHNTAAXXXXXXXXXXXXXXXXATATRVERMDPARSSPGNSKHAAA-------SWDITIAPSLQAVLVGVASRPDVFYRVPAARLALDAVVYLLMLAIYTVALYRVEPGSIGPWEVLLYIWVLSMCFSEVTTGAG----------GVVGDADTERR---------EGGTPAEPLRQRR---------RDYRG-DAV-----DGEWMCFQGFVALFASAAPLLLFRLLRGVAAFLPVLGPAVKAISLLAREASKVLPSLACLLLGTALALHVMYGDGSPLLEGTE----LSGG--FVDGFRTFGVSCRTVARAGFGDIQVP-DEDVPYGEPLYVLLYVFAAAGALALVSIYVGVLSNVKEASPVEMEKNFQLARARLIVRAAEASRRNVLPPPFNLAQGGLALVVSATQCHRHVSERRQAVSGACSVHGRFVFWLVLGPLAVASAMLLNLAALFYFWWFSVKRLFEDPRRAPRMLYVLLRTTLRCGVCAPLRLLGWWVAAVSCVLKGDKAGQRARTVARKAVLKGREGGDYHLSHLLRRTRWGAGGGSSSLAQGFSVRDIVAAMDDPLQRGGPFRNVTSCFADEGPSTVAQMKALAKRNHENEARISDRLKGLEVAVLGTLARMDAVSEETAKVQQ 1698          
BLAST of mRNA_F-serratus_M_contig617.16970.1 vs. uniprot
Match: D7FN03_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN03_ECTSI)

HSP 1 Score: 673 bits (1736), Expect = 1.160e-223
Identity = 464/1086 (42.73%), Postives = 596/1086 (54.88%), Query Frame = 0
Query:    1 MNELMTKDNGGWTPLVFAFRRGNRDVFIVAMQAFLDRGDEGARRLKEQLLS-SQDESRSCLLEAAATAGWFSRAPQMPMSLMELIDSAWDDFERGLDSRRSITVDREAFEHAVRYQDLTGLSCLLSHGCGLSAPLIERLVEACGPRSVRDCMLEAAASARNPLVPALGLLKALVFAEVSCPLHASWFSWMRAALEKLVLQVLANLPVSARALNKRVTPAGVTSIFGRVNSDASGVNSGGTSFGAGGCGPGGSSAVHRFRRPAAAG------------------------------------SLAGRTGAGAISGRRDHGGSGGVGSAASASSDGASKGKPSGAGFASGPKARESLFVAEWVFEPESRTIGMRKPSFEGPLAAALGMSWPAFISSPLVGDFLWAKFTAGIELGCLPTAKTPDQWYSN-------KEPPKLADSAAAXXXXXXXXXXXXXXXSSITAPSSEPHAEG-EPRRSACPVCLRQMDNGEWDITVAPGLRAILVGAATKPEVFYGMPAAAAVFEAFIYVCMLVVYVLTIYRANPGPISILEVVLYVWVLGLCLKQVNEST-GAAKKIVLAARGG--AAEANRSRKGVRRRRWRWQ---------GGMTATVLLAGALICRLVGLLQDPEGHDRVALAESSQEWTLFDLSLALLVVAAPLLLLHLLVSAAAFSPGLGPTVQAMTLMAREAAKVLPILACILFGCALALHVLYGEGSSLLEGTDFVSPLTGGAEYVDGFRTFGASCGTVLGAGLGVIRPPLDADVPYGEPLYIILYLFGAAVALGMVSILAGVLANSESADPVKMDQEFHLEKARAIVRATETCRQNGLPAPLNIAQWILSTIVSVVQPTRSPSSKRRAAKEACLIQGRLIFWILMGLPSVAAVIALDLVSLGCFWWISWSRVFEGPQNLPRVSLSLLGTSLWCILGSPLRLLFAWLTAARLVVRGDREGRLSGEAVRRTVLKGRAGGDYDLARLLKRTRWGGGSSRSVSERGCSVADIVASIDDPLSRGSRFKEALCC-DDDMPSTLGQIKALAKRNQESQGRTVERLKSLEGSLLVALARIESGLERGGRVQQ 1028
            M+ELMTKDNGGW+PL+FA RRGNR VF  AMQAF+DRG+EG+R LKEQLL+ S+D  +  +LE+ A AGW SR PQ+  +++EL+DSAWD+ ER LD R  ++  R     A+R         LL   CG                                                            +  LEKLVLQVL NLPVSARA NKR    G ++IF R+         G +  GAG                                                        ++    G   ++G     GSG  G     S  GA              +A+ESL VAEWVFEPES  +GMR  +FEGPLA AL M W   + SPLV D LWAK TAG+EL        P QWY+          P     +A       XXXXXXXXXX            EG +PRRS+ P  L+      WDIT+AP L+A+LVG AT P+VFY +PAA    +A +Y+ ML +Y + +YR  PG +   EV+LY+WVL +C  +V     G         R G  AAE    R  V+R R R           GG  +TV+L  A++CRL   +QD  G D V       EW  F   +ALL  AAPLLL  LL   AAF P LGPTV+A++L+AREA+KVLP LAC+L G ALALHV+YG+GS LLEGT+    L GG+  VDGFRTFG SC TV  AG G I+  LD DVPYGEPLY++LY+F AA ALG+VSIL GVL+N + A PV+M++ F L +AR IVRA E  R+N LP P N+AQ  L+ +VS  Q  R  S +R+A   AC + GR +FW+++G  ++A+ + L+L +L CFWW S  R+FE P+  PR+   LL T+L C + +PLRLL  W+ A   V++GD+ G+ +  AVR+ VLKGR GGDY L+ LL+RTRWG G   S   +G SV DI A++DDPL RG  F+    C  D+ PST+ Q+KALAKRN E++ R  +RLK LE ++L  LAR+++  E   +VQQ
Sbjct:    1 MSELMTKDNGGWSPLMFASRRGNRFVFFAAMQAFIDRGEEGSRLLKEQLLAGSEDREKGSILESVAMAGWLSRGPQLQPAVLELLDSAWDELERSLDDRLLVSGARGVLRAALR-------EGLLPGSCGFG----------------------------------------------------------QKTLEKLVLQVLTNLPVSARAFNKRGIGGGRSNIFSRMXXXXX-XXXGASMVGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNGMVTMGPHCGTVLLAGLGQEAGSGKAGD----SRRGA---------VIFNARAKESLLVAEWVFEPESEAVGMRGAAFEGPLALALQMGWTELVCSPLVLDLLWAKLTAGVELDVHSCGANPAQWYARLPGPSAGSAPAPAVTAATPVHNTAXXXXXXXXXXXXXXXXXXATRVEGVDPRRSS-PGHLKNAA-ASWDITIAPSLQAVLVGVATGPDVFYRVPAARLALDAVVYLLMLAIYTVALYRVEPGSVDPWEVLLYIWVLSMCFSEVATGVWGVVGDADTDPREGGTAAEPLGQRHRVKRSRKRGSLCSCSSPFFGGKFSTVVLMAAMMCRLGDYVQD-SGGDAV-----DGEWRCFQGFVALLASAAPLLLFRLLGGVAAFLPVLGPTVKAISLLAREASKVLPSLACLLLGTALALHVMYGDGSPLLEGTE----LPGGS--VDGFRTFGVSCRTVARAGFGDIQV-LDEDVPYGEPLYVLLYVFAAAGALGLVSILVGVLSNLKEASPVEMEKNFQLARARLIVRAAEASRRNVLPPPFNLAQGGLALVVSATQCHRHVSERRQAVSGACSVHGRFVFWLVLGPLALASAMLLNLAALFCFWWFSVKRLFEDPRRAPRMLYVLLCTTLCCGVCAPLRLLGWWVAAVSCVLKGDKVGQRARTAVRKAVLKGREGGDYHLSHLLRRTRWGAGGGSSSLAQGFSVRDIAAAMDDPLQRGGPFRNVSSCFADEGPSTVAQMKALAKRNHENEARISDRLKGLEVAVLGTLARMDAVSEETAKVQQ 992          
BLAST of mRNA_F-serratus_M_contig617.16970.1 vs. uniprot
Match: A0A6H5JJ53_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJ53_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 3.180e-8
Identity = 64/201 (31.84%), Postives = 99/201 (49.25%), Query Frame = 0
Query:   11 GWTPLVFAFRRGNRDVFIVAMQAFLDRGDEGARRLKEQLLSSQDESRSC---LLEAAATAGWFSRAPQMPMSLMELIDSAWDDFERGLDSRRSITVDREAFEHAVRYQDLTGLSCLLSHGCGLSAPLIERLVE---ACGPRSVRDCMLEAAASARNPLVPALGLLKALVFAEVSCPLHASWFSWMRAALEKLVLQVLANLP 205
            GWTPL  A  RG        M A ++  +  A  LKEQL  S D+       L+ AAA++   SR+  +   L EL+    D  E    +RR     R A ++A  Y  L  LSCL+++GC +S   +  L+    A G  +   C+ +   +ARNPL+PA  +L+A+  A      H  +   M++ +++LV ++L  LP
Sbjct:  532 GWTPL-HAAARGXXXXMGAVMTALVNYME--ADELKEQLSQSHDKDSDLPTPLMFAAASSSLDSRS--LNPLLSELLGCMCDIDE----ARRQ----RTAVDYAAAYGRLDTLSCLIAYGCEISDQTVTTLLSGDLAVGAAAFNRCIWKGITTARNPLIPAHNVLRAVSRAADRDAKHRQFLLRMQSDVDELVQEMLQQLP 719          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig617.16970.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L4C8_9PHAE1.550e-23145.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FN03_ECTSI1.160e-22342.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JJ53_9PHAE3.180e-831.84Ion_trans domain-containing protein n=2 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 648..667
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 872..898
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 628..647
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 476..498
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 824..852
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 599..627
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 557..579
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 899..1034
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 499..503
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 525..556
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 750..823
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 580..598
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 853..871
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..475
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 668..724
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 504..524
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 725..749
NoneNo IPR availableTMHMMTMhelixcoord: 867..889
NoneNo IPR availableTMHMMTMhelixcoord: 605..627
NoneNo IPR availableTMHMMTMhelixcoord: 476..498
NoneNo IPR availableTMHMMTMhelixcoord: 648..667
NoneNo IPR availableTMHMMTMhelixcoord: 727..749
NoneNo IPR availableTMHMMTMhelixcoord: 819..841
NoneNo IPR availableTMHMMTMhelixcoord: 559..581

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig617contigF-serratus_M_contig617:279548..300827 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig617.16970.1mRNA_F-serratus_M_contig617.16970.1Fucus serratus malemRNAF-serratus_M_contig617 279548..301208 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig617.16970.1 ID=prot_F-serratus_M_contig617.16970.1|Name=mRNA_F-serratus_M_contig617.16970.1|organism=Fucus serratus male|type=polypeptide|length=1035bp
MNELMTKDNGGWTPLVFAFRRGNRDVFIVAMQAFLDRGDEGARRLKEQLL
SSQDESRSCLLEAAATAGWFSRAPQMPMSLMELIDSAWDDFERGLDSRRS
ITVDREAFEHAVRYQDLTGLSCLLSHGCGLSAPLIERLVEACGPRSVRDC
MLEAAASARNPLVPALGLLKALVFAEVSCPLHASWFSWMRAALEKLVLQV
LANLPVSARALNKRVTPAGVTSIFGRVNSDASGVNSGGTSFGAGGCGPGG
SSAVHRFRRPAAAGSLAGRTGAGAISGRRDHGGSGGVGSAASASSDGASK
GKPSGAGFASGPKARESLFVAEWVFEPESRTIGMRKPSFEGPLAAALGMS
WPAFISSPLVGDFLWAKFTAGIELGCLPTAKTPDQWYSNKEPPKLADSAA
AAAAAAAAAAAATATASSITAPSSEPHAEGEPRRSACPVCLRQMDNGEWD
ITVAPGLRAILVGAATKPEVFYGMPAAAAVFEAFIYVCMLVVYVLTIYRA
NPGPISILEVVLYVWVLGLCLKQVNESTGAAKKIVLAARGGAAEANRSRK
GVRRRRWRWQGGMTATVLLAGALICRLVGLLQDPEGHDRVALAESSQEWT
LFDLSLALLVVAAPLLLLHLLVSAAAFSPGLGPTVQAMTLMAREAAKVLP
ILACILFGCALALHVLYGEGSSLLEGTDFVSPLTGGAEYVDGFRTFGASC
GTVLGAGLGVIRPPLDADVPYGEPLYIILYLFGAAVALGMVSILAGVLAN
SESADPVKMDQEFHLEKARAIVRATETCRQNGLPAPLNIAQWILSTIVSV
VQPTRSPSSKRRAAKEACLIQGRLIFWILMGLPSVAAVIALDLVSLGCFW
WISWSRVFEGPQNLPRVSLSLLGTSLWCILGSPLRLLFAWLTAARLVVRG
DREGRLSGEAVRRTVLKGRAGGDYDLARLLKRTRWGGGSSRSVSERGCSV
ADIVASIDDPLSRGSRFKEALCCDDDMPSTLGQIKALAKRNQESQGRTVE
RLKSLEGSLLVALARIESGLERGGRVQQHRPSDH*
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