prot_F-serratus_M_contig617.16964.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig617.16964.1
Unique Nameprot_F-serratus_M_contig617.16964.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length149
Homology
BLAST of mRNA_F-serratus_M_contig617.16964.1 vs. uniprot
Match: D7FHF7_ECTSI (40S ribosomal protein S12 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHF7_ECTSI)

HSP 1 Score: 254 bits (650), Expect = 2.970e-85
Identity = 126/141 (89.36%), Postives = 131/141 (92.91%), Query Frame = 0
Query:    8 MNEEVPQETTPAEVTEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGPDGEATKIVPCSCAVVTDYGEQSQALQVLLDHLKKGGD 148
            M EEV  E T +   EVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDC+NPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIG +GEATKIVPCSCAVVTDYGEQ+QAL VLL+HLKKGGD
Sbjct:    1 MKEEVAVEETGSPEVEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCDNPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGAEGEATKIVPCSCAVVTDYGEQTQALGVLLEHLKKGGD 141          
BLAST of mRNA_F-serratus_M_contig617.16964.1 vs. uniprot
Match: A0A835YYB7_9STRA (40S ribosomal protein S12 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYB7_9STRA)

HSP 1 Score: 226 bits (575), Expect = 9.180e-74
Identity = 109/148 (73.65%), Postives = 126/148 (85.14%), Query Frame = 0
Query:    1 MGAEDVEMNEEVPQETTPAEVTEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGPDGEATKIVPCSCAVVTDYGEQSQALQVLLDHLKKGGD 148
            M +EDV    E P    PA   +V E+SV DALKEVLKKALIFDGLRRGLHEC KALDRG+ARLCCLAKDCENPEYT+LVRALC+EG VH+IMV+TRQ+LGQWAGLCKI  +GEATK+VPCSCAVVTD+G +S AL VL++HL+KGG+
Sbjct:    1 MSSEDVA---EAPAAAAPAPAADVAELSVPDALKEVLKKALIFDGLRRGLHECVKALDRGTARLCCLAKDCENPEYTRLVRALCEEGGVHIIMVNTRQQLGQWAGLCKIDAEGEATKVVPCSCAVVTDFGTESPALTVLMEHLRKGGE 145          
BLAST of mRNA_F-serratus_M_contig617.16964.1 vs. uniprot
Match: A0A7S2CVX4_9STRA (40S ribosomal protein S12 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CVX4_9STRA)

HSP 1 Score: 196 bits (497), Expect = 7.190e-62
Identity = 91/130 (70.00%), Postives = 112/130 (86.15%), Query Frame = 0
Query:   15 ETTPAEVTEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGPDGEATKIVPCSCAVVTDYGEQSQALQVLLDHLK 144
            E    E  EV+E+ VLDALKEVLKKAL+ DGL RGLHECAKALD+ +A+LCCLAKDC+NPEYT+LVRALC+EG V+L+MVDT ++LG+W GLCKI  +GEATK+V CSCAV+T++GE+SQAL VLL+ LK
Sbjct:   12 EAAETEEVEVEEMGVLDALKEVLKKALVHDGLSRGLHECAKALDKHTAKLCCLAKDCDNPEYTKLVRALCEEGGVNLVMVDTGKQLGEWCGLCKIDEEGEATKVVRCSCAVITEFGEESQALNVLLEFLK 141          
BLAST of mRNA_F-serratus_M_contig617.16964.1 vs. uniprot
Match: A0A7S2CD91_9STRA (40S ribosomal protein S12 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CD91_9STRA)

HSP 1 Score: 187 bits (474), Expect = 2.070e-58
Identity = 92/137 (67.15%), Postives = 112/137 (81.75%), Query Frame = 0
Query:   10 EEVPQETTPAEV-TEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGPDGEATKIVPCSCAVVTDYGEQSQALQVLLDHLKK 145
            EEV  E    E   EV+E+ VLDALKEVLKKAL+ DGLRRGLHE  KALDR SA+LCCLAKDC+NPEY +LVRALC+EG V+L+MV+T + LG+W GLCKI  +GEA K+V CSCAVVT++GE++QAL +LL+ LKK
Sbjct:    4 EEVMDEVAAEEPEVEVEEMGVLDALKEVLKKALVHDGLRRGLHEGVKALDRHSAKLCCLAKDCDNPEYNKLVRALCEEGGVNLVMVETGKTLGEWCGLCKIDENGEAVKVVRCSCAVVTEFGEETQALNILLEFLKK 140          
BLAST of mRNA_F-serratus_M_contig617.16964.1 vs. uniprot
Match: K0T7T2_THAOC (40S ribosomal protein S12 n=2 Tax=Thalassiosira TaxID=35127 RepID=K0T7T2_THAOC)

HSP 1 Score: 180 bits (457), Expect = 7.730e-56
Identity = 88/128 (68.75%), Postives = 105/128 (82.03%), Query Frame = 0
Query:   21 VTEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGPDGEATKIVPCSCAVVTDYGEQSQALQVLLDHLKKGGD 148
            V EV E++VLDALKEVLKKALI DGLR+GLHECAKALDR SARLCCLAKDCEN EY +L+RALC EG V +IMVD+ ++LG W GL K+  DGE  K V  SCAV+TD+GE+++AL VLLD+L+K  D
Sbjct:   14 VEEVAEMNVLDALKEVLKKALIHDGLRKGLHECAKALDRRSARLCCLAKDCENEEYKKLIRALCAEGEVSVIMVDSGKDLGAWCGLAKLDADGEVKKAVRTSCAVITDFGEETRALTVLLDYLQKQSD 141          
BLAST of mRNA_F-serratus_M_contig617.16964.1 vs. uniprot
Match: A0A7S1UV16_9STRA (40S ribosomal protein S12 n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UV16_9STRA)

HSP 1 Score: 180 bits (456), Expect = 1.250e-55
Identity = 86/140 (61.43%), Postives = 109/140 (77.86%), Query Frame = 0
Query:    9 NEEVPQETTPAEVTEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGPDGEATKIVPCSCAVVTDYGEQSQALQVLLDHLKKGGD 148
            ++EV +   P E  E   +SVLDALKEVLKKA+I DGL++GLHECAKALDR SARLCCLAKDCEN EY +L+RALC EG VH++MVD+ ++LG W GL K+  DG   K V  SCAV+TD+GE+++AL +LLD+L+K  D
Sbjct:    3 DDEVDEAPAPVEEEEEVAMSVLDALKEVLKKAMIHDGLKKGLHECAKALDRRSARLCCLAKDCENEEYKKLIRALCAEGEVHVVMVDSGKDLGAWCGLAKLQDDGSVKKAVRTSCAVITDFGEETRALTILLDYLQKQAD 142          
BLAST of mRNA_F-serratus_M_contig617.16964.1 vs. uniprot
Match: A0A7S2LXQ0_9STRA (40S ribosomal protein S12 n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LXQ0_9STRA)

HSP 1 Score: 179 bits (454), Expect = 7.880e-55
Identity = 86/126 (68.25%), Postives = 104/126 (82.54%), Query Frame = 0
Query:   23 EVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGPDGEATKIVPCSCAVVTDYGEQSQALQVLLDHLKKGGD 148
            EV E++VLDALKEVLKKAL+ DGLR+GLHECAKALDR SARLCCLAKDCEN EY +L+RALC EG V +IMVD+ ++LG W GL K+  DGE  K V  SCAV+TD+GE+++AL VLLD+L+K  D
Sbjct:   54 EVAEMNVLDALKEVLKKALVHDGLRKGLHECAKALDRRSARLCCLAKDCENEEYKKLIRALCAEGEVSVIMVDSGKDLGAWCGLAKLDADGEVKKAVRTSCAVITDFGEETRALSVLLDYLQKQAD 179          
BLAST of mRNA_F-serratus_M_contig617.16964.1 vs. uniprot
Match: A0A7S1CEP1_9STRA (40S ribosomal protein S12 n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CEP1_9STRA)

HSP 1 Score: 178 bits (451), Expect = 8.980e-55
Identity = 83/135 (61.48%), Postives = 104/135 (77.04%), Query Frame = 0
Query:   13 PQETTPAEVTEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGPDGEATKIVPCSCAVVTDYGEQSQALQVLLDHLKKGG 147
            P+E T AE  +   +    AL+EVLKKAL+ DGL+RGLHE AKALDRGSARLCCLA+DC+ P YT+LVRALC  G + L+MV   +ELG+WAGLCKI  +G ATK+V CSC  VTDYG++S+AL +LLD +K+ G
Sbjct:   13 PEEETKAEPEKTGPMDTRTALREVLKKALMHDGLKRGLHEAAKALDRGSARLCCLAEDCDEPNYTRLVRALCSNGGIPLVMVPKGEELGEWAGLCKIDKEGNATKVVKCSCVAVTDYGQESEALSILLDLIKQSG 147          
BLAST of mRNA_F-serratus_M_contig617.16964.1 vs. uniprot
Match: A0A7S2HNH8_9STRA (40S ribosomal protein S12 n=2 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2HNH8_9STRA)

HSP 1 Score: 177 bits (450), Expect = 9.570e-55
Identity = 88/137 (64.23%), Postives = 110/137 (80.29%), Query Frame = 0
Query:   14 QETTPAEVTEVKEI--SVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGPDGEATKIVPCSCAVVTDYGEQSQALQVLLDHLKKGGD 148
            +E  PAEV EV+E+  SVLDALKEVLKKALI +GL++GLHECAKALDR +ARLCCLAKDCEN EY +L+RALC EG V +IMVD+ ++LG W GL K+  +G   K V  SCAV+TD+GE+++AL VLLD+L+K  D
Sbjct:    5 EEAAPAEVEEVEEVEMSVLDALKEVLKKALIHNGLKKGLHECAKALDRKTARLCCLAKDCENEEYKKLIRALCAEGEVSVIMVDSGKDLGAWCGLAKLDDEGGVKKAVRTSCAVITDFGEETRALTVLLDYLQKQAD 141          
BLAST of mRNA_F-serratus_M_contig617.16964.1 vs. uniprot
Match: A0A6T5YAX8_9STRA (40S ribosomal protein S12 n=3 Tax=Bacillariophyta TaxID=2836 RepID=A0A6T5YAX8_9STRA)

HSP 1 Score: 176 bits (447), Expect = 2.820e-54
Identity = 85/131 (64.89%), Postives = 106/131 (80.92%), Query Frame = 0
Query:   18 PAEVTEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGPDGEATKIVPCSCAVVTDYGEQSQALQVLLDHLKKGGD 148
            PA V EV E+SVLDALKEVLKK+++ DGLR+GLHECAKALDR +ARLCCLAKDCEN EY +L+RALC EG VH++MV++ +ELG W GL K+  DG   K V  SCAV+TD+GE+++AL +LLD L+K  D
Sbjct:   12 PAVVEEV-EMSVLDALKEVLKKSMVHDGLRKGLHECAKALDRRAARLCCLAKDCENEEYKKLIRALCAEGEVHVVMVESGKELGAWCGLAKLNDDGSVKKAVRTSCAVITDFGEETRALTILLDFLQKQAD 141          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig617.16964.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHF7_ECTSI2.970e-8589.3640S ribosomal protein S12 n=2 Tax=Ectocarpus TaxID... [more]
A0A835YYB7_9STRA9.180e-7473.6540S ribosomal protein S12 n=1 Tax=Tribonema minus ... [more]
A0A7S2CVX4_9STRA7.190e-6270.0040S ribosomal protein S12 n=1 Tax=Florenciella par... [more]
A0A7S2CD91_9STRA2.070e-5867.1540S ribosomal protein S12 n=1 Tax=Dictyocha specul... [more]
K0T7T2_THAOC7.730e-5668.7540S ribosomal protein S12 n=2 Tax=Thalassiosira Ta... [more]
A0A7S1UV16_9STRA1.250e-5561.4340S ribosomal protein S12 n=1 Tax=Grammatophora oc... [more]
A0A7S2LXQ0_9STRA7.880e-5568.2540S ribosomal protein S12 n=1 Tax=Skeletonema mari... [more]
A0A7S1CEP1_9STRA8.980e-5561.4840S ribosomal protein S12 n=1 Tax=Bicosoecida sp. ... [more]
A0A7S2HNH8_9STRA9.570e-5564.2340S ribosomal protein S12 n=2 Tax=Lithodesmiaceae ... [more]
A0A6T5YAX8_9STRA2.820e-5464.8940S ribosomal protein S12 n=3 Tax=Bacillariophyta ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000530Ribosomal protein S12ePRINTSPR00972RIBSOMALS12Ecoord: 116..129
score: 57.79
coord: 36..49
score: 68.18
coord: 91..112
score: 49.59
coord: 50..66
score: 52.94
IPR000530Ribosomal protein S12ePANTHERPTHR1184340S RIBOSOMAL PROTEIN S12coord: 15..145
IPR000530Ribosomal protein S12ePROSITEPS01189RIBOSOMAL_S12Ecoord: 32..50
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 8..146
e-value: 4.1E-51
score: 173.7
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 29..144
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 31..125
e-value: 1.2E-22
score: 79.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig617contigF-serratus_M_contig617:228531..229982 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig617.16964.1mRNA_F-serratus_M_contig617.16964.1Fucus serratus malemRNAF-serratus_M_contig617 227822..229982 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig617.16964.1 ID=prot_F-serratus_M_contig617.16964.1|Name=mRNA_F-serratus_M_contig617.16964.1|organism=Fucus serratus male|type=polypeptide|length=149bp
MGAEDVEMNEEVPQETTPAEVTEVKEISVLDALKEVLKKALIFDGLRRGL
HECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQEL
GQWAGLCKIGPDGEATKIVPCSCAVVTDYGEQSQALQVLLDHLKKGGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000530Ribosomal_S12e
IPR029064L30e-like
IPR004038Ribosomal_L7Ae/L30e/S12e/Gad45