prot_F-serratus_M_contig6.16617.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6.16617.1
Unique Nameprot_F-serratus_M_contig6.16617.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length121
Homology
BLAST of mRNA_F-serratus_M_contig6.16617.1 vs. uniprot
Match: A0A6H5KHU7_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHU7_9PHAE)

HSP 1 Score: 223 bits (568), Expect = 1.340e-68
Identity = 105/121 (86.78%), Postives = 117/121 (96.69%), Query Frame = 0
Query:    1 MVYPPSLKLISTWFKHRRGVALGTIIGGLALGSALPHLIVGAGGVGDRWRIVTYSTSAMSVLSGLMVIAFVPTGPFPFSKAKFSLRTLPRLASNRGVVLATLGYCAHMWELYGLWTWFLTL 121
            +VYPPSLKLISTWFK+ RGVALGTIIGGL+LGSALPHLIVGAGGVGDRWRIVTYSTS ++++SG+MV+AFVPTGPFPFSKAKFSL+T+PRLA NRGVVLATL YCAHMWELYGLWTWFL+L
Sbjct:  207 LVYPPSLKLISTWFKNGRGVALGTIIGGLSLGSALPHLIVGAGGVGDRWRIVTYSTSILALISGVMVLAFVPTGPFPFSKAKFSLQTIPRLARNRGVVLATLAYCAHMWELYGLWTWFLSL 327          
BLAST of mRNA_F-serratus_M_contig6.16617.1 vs. uniprot
Match: D8LQR1_ECTSI (Possible transporter, Major facilitator superfamily (MFS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQR1_ECTSI)

HSP 1 Score: 209 bits (531), Expect = 8.980e-63
Identity = 98/114 (85.96%), Postives = 110/114 (96.49%), Query Frame = 0
Query:    8 KLISTWFKHRRGVALGTIIGGLALGSALPHLIVGAGGVGDRWRIVTYSTSAMSVLSGLMVIAFVPTGPFPFSKAKFSLRTLPRLASNRGVVLATLGYCAHMWELYGLWTWFLTL 121
            +LISTWFK+ RGVALGTIIGGL+LGSALPHLIVGAGGVGDRWRIVTYSTS ++++SG+MV+AFVPTGPFPFSKAKFSL+T+PRLA NRGVVLATL YCAHMWELYGLWTWFL+L
Sbjct:  249 QLISTWFKYGRGVALGTIIGGLSLGSALPHLIVGAGGVGDRWRIVTYSTSILALISGVMVLAFVPTGPFPFSKAKFSLQTIPRLAGNRGVVLATLAYCAHMWELYGLWTWFLSL 362          
BLAST of mRNA_F-serratus_M_contig6.16617.1 vs. uniprot
Match: A0A6M9PK21_9BURK (MFS transporter n=1 Tax=Polynucleobacter sp. LimPoW16 TaxID=1743162 RepID=A0A6M9PK21_9BURK)

HSP 1 Score: 137 bits (346), Expect = 1.270e-36
Identity = 65/120 (54.17%), Postives = 85/120 (70.83%), Query Frame = 0
Query:    1 MVYPPSLKLISTWFKHRRGVALGTIIGGLALGSALPHLIVGAGGVGDRWRIVTYSTSAMSVLSGLMVIAFVPTGPFPFSKAKFSLRTLPRLASNRGVVLATLGYCAHMWELYGLWTWFLT 120
            +VYPPSLKLI+TWF   RGVALG ++G + LGSA PH I   GG+  RW IV  +T+  ++L  L++  FV  GPFPF +A F+L  + ++  NRG+VLA+LGY  HMWELY +W WFLT
Sbjct:  120 LVYPPSLKLIATWFTKGRGVALGALVGAITLGSASPHFINAIGGL--RWEIVIVATTLATLLGALILQLFVHEGPFPFPRAPFNLGRMGQVFKNRGIVLASLGYFGHMWELYAMWAWFLT 237          
BLAST of mRNA_F-serratus_M_contig6.16617.1 vs. uniprot
Match: UPI00190D25A5 (MFS transporter n=1 Tax=Noviherbaspirillum pedocola TaxID=2801341 RepID=UPI00190D25A5)

HSP 1 Score: 135 bits (341), Expect = 6.320e-36
Identity = 62/120 (51.67%), Postives = 83/120 (69.17%), Query Frame = 0
Query:    1 MVYPPSLKLISTWFKHRRGVALGTIIGGLALGSALPHLIVGAGGVGDRWRIVTYSTSAMSVLSGLMVIAFVPTGPFPFSKAKFSLRTLPRLASNRGVVLATLGYCAHMWELYGLWTWFLT 120
            +VYPPSLKLI+TWF   RGVALG ++G L LGSA+PHL+   GG+  RW++V  +T+ ++++   MV  FV  GP+PF +A F  R +     NRG+V  +LGY  HMWELY +W WFLT
Sbjct:  115 LVYPPSLKLIATWFARGRGVALGVLVGALTLGSAMPHLVNAVGGL--RWQVVISATTILTLVGAAMVQLFVHEGPYPFPRAPFDPRRVTDALKNRGIVYVSLGYFGHMWELYAMWAWFLT 232          
BLAST of mRNA_F-serratus_M_contig6.16617.1 vs. uniprot
Match: UPI001FE14329 (MFS transporter n=1 Tax=Methyloceanibacter sp. wino2 TaxID=2170729 RepID=UPI001FE14329)

HSP 1 Score: 133 bits (334), Expect = 1.350e-35
Identity = 63/118 (53.39%), Postives = 83/118 (70.34%), Query Frame = 0
Query:    2 VYPPSLKLISTWFKHRRGVALGTIIGGLALGSALPHLIVGAGGVGDRWRIVTYSTSAMSVLSGLMVIAFVPTGPFPFSKAKFSLRTLPRLASNRGVVLATLGYCAHMWELYGLWTWFL 119
            VYPP+LKLISTWF+  RGVALG++IG L LGSA+PH I   GG+   WRIV  +TS  S+L+ +++I  +  GP+PF+K KF    + +  +NR  VL T+GY  HMWELY +WTW L
Sbjct:  126 VYPPALKLISTWFRKGRGVALGSVIGALTLGSAMPHAINALGGL--DWRIVIVTTSIASLLAAVLMITLLREGPYPFAKTKFDPSQIKQALANRVFVLGTVGYLGHMWELYAMWTWLL 241          
BLAST of mRNA_F-serratus_M_contig6.16617.1 vs. uniprot
Match: A0A7V9IC56_9ACTN (MFS transporter n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9IC56_9ACTN)

HSP 1 Score: 134 bits (337), Expect = 1.360e-35
Identity = 64/117 (54.70%), Postives = 82/117 (70.09%), Query Frame = 0
Query:    2 VYPPSLKLISTWFKHRRGVALGTIIGGLALGSALPHLIVGAGGVGDRWRIVTYSTSAMSVLSGLMVIAFVPTGPFPFSKAKFSLRTLPRLASNRGVVLATLGYCAHMWELYGLWTWF 118
            VYPPSLKL STWF+  RGVALG ++G L +GSA PHL+ G GG+   WR V ++TSA++V+ GL+    VP GP PF +A+F      ++ SNR V LA+LGY  HMWELY +W WF
Sbjct:   95 VYPPSLKLSSTWFQKGRGVALGILVGALTIGSAAPHLVNGLGGL--EWRTVIWATSALTVIGGLVAGFLVPEGPHPFPQARFDPTQAGQVFSNRAVRLASLGYFGHMWELYAMWAWF 209          
BLAST of mRNA_F-serratus_M_contig6.16617.1 vs. uniprot
Match: A0A349B4Y2_9ACTN (MFS transporter (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B4Y2_9ACTN)

HSP 1 Score: 129 bits (325), Expect = 2.860e-35
Identity = 62/117 (52.99%), Postives = 78/117 (66.67%), Query Frame = 0
Query:    2 VYPPSLKLISTWFKHRRGVALGTIIGGLALGSALPHLIVGAGGVGDRWRIVTYSTSAMSVLSGLMVIAFVPTGPFPFSKAKFSLRTLPRLASNRGVVLATLGYCAHMWELYGLWTWF 118
            +YPP LK ++TWF+ RRG ALG ++G L LGSA+PHL+ G GGV  RW +V   TS ++V  GL+       GPFPF KA F    +PR  ++ GV LATLGY  HMWELY +W WF
Sbjct:   99 IYPPGLKSMATWFRLRRGTALGVMVGALTLGSAVPHLVNGLGGV--RWEVVIVVTSGLTVTGGLVAELAGRDGPFPFPKAVFDPTQVPRAFADPGVRLATLGYFGHMWELYAMWAWF 213          
BLAST of mRNA_F-serratus_M_contig6.16617.1 vs. uniprot
Match: A0A538HTS8_9ACTN (MFS transporter n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538HTS8_9ACTN)

HSP 1 Score: 132 bits (331), Expect = 1.340e-34
Identity = 62/118 (52.54%), Postives = 82/118 (69.49%), Query Frame = 0
Query:    2 VYPPSLKLISTWFKHRRGVALGTIIGGLALGSALPHLIVGAGGVGDRWRIVTYSTSAMSVLSGLMVIAFVPTGPFPFSKAKFSLRTLPRLASNRGVVLATLGYCAHMWELYGLWTWFL 119
            VYPP+LKL++TWF+  RG ALG ++G L LGS+LPHL+ G GG+   W +V   TSA++V  GL+ +  V  GP+PF +A F  R    + +NRGV LA+LGY  HMWELY +W WFL
Sbjct:  114 VYPPALKLMATWFRRSRGTALGILVGALTLGSSLPHLVNGLGGL--DWHVVIGVTSALTVAGGLIALTVVREGPYPFPQATFDPRQARLVFANRGVRLASLGYFGHMWELYAMWAWFL 229          
BLAST of mRNA_F-serratus_M_contig6.16617.1 vs. uniprot
Match: A0A6L5G2I6_9ACTN (MFS transporter n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A6L5G2I6_9ACTN)

HSP 1 Score: 132 bits (332), Expect = 1.340e-34
Identity = 61/118 (51.69%), Postives = 82/118 (69.49%), Query Frame = 0
Query:    2 VYPPSLKLISTWFKHRRGVALGTIIGGLALGSALPHLIVGAGGVGDRWRIVTYSTSAMSVLSGLMVIAFVPTGPFPFSKAKFSLRTLPRLASNRGVVLATLGYCAHMWELYGLWTWFL 119
            VYPP+LKL+STWF+  RG ALG ++G + LGSA PHL+ G GG+   W+IV  +TS ++ L G++V+A +  GPFPF +A F  R    +  +RGV LA LGY  HMWELY +W WF+
Sbjct:  117 VYPPALKLMSTWFQRGRGTALGILVGAITLGSAAPHLVNGLGGL--DWKIVIVTTSLLTALGGILVVARIDDGPFPFPRAVFDPRKASLVLHDRGVRLACLGYFGHMWELYAMWAWFI 232          
BLAST of mRNA_F-serratus_M_contig6.16617.1 vs. uniprot
Match: A0A3A3GQ25_9BURK (MFS transporter n=2 Tax=Noviherbaspirillum sedimenti TaxID=2320865 RepID=A0A3A3GQ25_9BURK)

HSP 1 Score: 132 bits (332), Expect = 1.470e-34
Identity = 60/120 (50.00%), Postives = 84/120 (70.00%), Query Frame = 0
Query:    1 MVYPPSLKLISTWFKHRRGVALGTIIGGLALGSALPHLIVGAGGVGDRWRIVTYSTSAMSVLSGLMVIAFVPTGPFPFSKAKFSLRTLPRLASNRGVVLATLGYCAHMWELYGLWTWFLT 120
            +VYPPSLK I+TWF   RGVALG ++G + LGSA PHL+   GG+   W+IV  +TSA +    L+++ +V  GP+PF +A F+   + ++  NRG+VLA++GY  HMWELY +W WFLT
Sbjct:  122 LVYPPSLKFIATWFLRGRGVALGVLVGAVTLGSASPHLVNAIGGL--NWQIVIIATSAATAAGALLLVLYVNEGPYPFPRAPFNPGRVKQVFFNRGIVLASIGYFGHMWELYAMWAWFLT 239          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6.16617.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KHU7_9PHAE1.340e-6886.78MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LQR1_ECTSI8.980e-6385.96Possible transporter, Major facilitator superfamil... [more]
A0A6M9PK21_9BURK1.270e-3654.17MFS transporter n=1 Tax=Polynucleobacter sp. LimPo... [more]
UPI00190D25A56.320e-3651.67MFS transporter n=1 Tax=Noviherbaspirillum pedocol... [more]
UPI001FE143291.350e-3553.39MFS transporter n=1 Tax=Methyloceanibacter sp. win... [more]
A0A7V9IC56_9ACTN1.360e-3554.70MFS transporter n=1 Tax=Actinomycetia bacterium Ta... [more]
A0A349B4Y2_9ACTN2.860e-3552.99MFS transporter (Fragment) n=1 Tax=Acidimicrobiace... [more]
A0A538HTS8_9ACTN1.340e-3452.54MFS transporter n=1 Tax=Actinomycetia bacterium Ta... [more]
A0A6L5G2I6_9ACTN1.340e-3451.69MFS transporter n=1 Tax=Actinomycetia bacterium Ta... [more]
A0A3A3GQ25_9BURK1.470e-3450.00MFS transporter n=2 Tax=Noviherbaspirillum sedimen... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 1..121
e-value: 1.8E-9
score: 38.6
NoneNo IPR availablePANTHERPTHR43791:SF11coord: 2..118
NoneNo IPR availablePANTHERPTHR43791FAMILY NOT NAMEDcoord: 2..118
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 77..96
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..76
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..39
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 97..118
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..50
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 119..121
NoneNo IPR availableTMHMMTMhelixcoord: 19..41
NoneNo IPR availableTMHMMTMhelixcoord: 56..78
NoneNo IPR availableTMHMMTMhelixcoord: 97..119
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 2..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6contigF-serratus_M_contig6:978782..982662 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6.16617.1mRNA_F-serratus_M_contig6.16617.1Fucus serratus malemRNAF-serratus_M_contig6 978782..982679 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6.16617.1 ID=prot_F-serratus_M_contig6.16617.1|Name=mRNA_F-serratus_M_contig6.16617.1|organism=Fucus serratus male|type=polypeptide|length=121bp
MVYPPSLKLISTWFKHRRGVALGTIIGGLALGSALPHLIVGAGGVGDRWR
IVTYSTSAMSVLSGLMVIAFVPTGPFPFSKAKFSLRTLPRLASNRGVVLA
TLGYCAHMWELYGLWTWFLTL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf