prot_F-serratus_M_contig6.16613.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6.16613.1
Unique Nameprot_F-serratus_M_contig6.16613.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length143
Homology
BLAST of mRNA_F-serratus_M_contig6.16613.1 vs. uniprot
Match: A0A6H5KJW5_9PHAE (Peptide deformylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJW5_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 2.490e-84
Identity = 120/142 (84.51%), Postives = 130/142 (91.55%), Query Frame = 0
Query:    1 MFKVMYASKGVGLAAPQVGVNKRLMVFNPEGDPKNWLDEAVLVNPRIVATGKGKVIDEEGCLSFPGMRGNVERNNWVKVEAQNAKGKKIKKKYTDWTARIFQHEYDHLDGTVYIDHLTSEGRQKVQPVLDKLISDFGEGAAL 142
            MFK+MYA+KGVGLAAPQVGVNKRLMVFNPEGD KNWLDEA+LVNP+IVA+GKGK+  EEGCLSFPGM G VER NWVKVEA NAKGKK+KKKYTDWTARIFQHEYDHLDGTVYIDHL+   R+KVQPVLDKL+SDFGE  AL
Sbjct:  134 MFKIMYAAKGVGLAAPQVGVNKRLMVFNPEGDAKNWLDEAILVNPKIVASGKGKITAEEGCLSFPGMEGKVERRNWVKVEAVNAKGKKVKKKYTDWTARIFQHEYDHLDGTVYIDHLSPSEREKVQPVLDKLVSDFGEDGAL 275          
BLAST of mRNA_F-serratus_M_contig6.16613.1 vs. uniprot
Match: A0A1Z5KQL3_FISSO (Peptide deformylase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQL3_FISSO)

HSP 1 Score: 212 bits (540), Expect = 1.730e-67
Identity = 99/142 (69.72%), Postives = 115/142 (80.99%), Query Frame = 0
Query:    1 MFKVMYASKGVGLAAPQVGVNKRLMVFNPEGDPKNWLDEAVLVNPRIVATGKGKVIDEEGCLSFPGMRGNVERNNWVKVEAQNAKGKKIKKKYTDWTARIFQHEYDHLDGTVYIDHLTSEGRQKVQPVLDKLISDFGEGAAL 142
            MF VMYA+ GVGLAAPQVGVNKRLMV+N  GDPK WLDE ++VNP IV   + + ++ EGCLSFPGM G VER+ W+KVEA N KGKK K+K+TDW ARIFQHEYDHLDGTVYID L  EGR KVQ  L++LI++FGEG AL
Sbjct:   78 MFMVMYAAAGVGLAAPQVGVNKRLMVYNQSGDPKKWLDEVIMVNPTIVEFSEARNVETEGCLSFPGMDGPVERSKWIKVEAMNMKGKKFKRKFTDWEARIFQHEYDHLDGTVYIDRLDEEGRSKVQHRLNELIAEFGEGGAL 219          
BLAST of mRNA_F-serratus_M_contig6.16613.1 vs. uniprot
Match: A0A7S1GJC1_CYCTE (Peptide deformylase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GJC1_CYCTE)

HSP 1 Score: 209 bits (532), Expect = 6.260e-66
Identity = 98/142 (69.01%), Postives = 113/142 (79.58%), Query Frame = 0
Query:    1 MFKVMYASKGVGLAAPQVGVNKRLMVFNPEGDPKNWLDEAVLVNPRIVATGKGKVIDEEGCLSFPGMRGNVERNNWVKVEAQNAKGKKIKKKYTDWTARIFQHEYDHLDGTVYIDHLTSEGRQKVQPVLDKLISDFGEGAAL 142
            MF VMYA++GVGLAAPQVGVNKRLMV+NP GD K WLDE VLVNPRIV    G  ++ EGCLSFP M G+V+R+ W+KVEA   KG+K+KKK+  W ARIFQHEYDHLDG VYID L+ +GR  VQP LD+LI DFGEG AL
Sbjct:  103 MFLVMYAAEGVGLAAPQVGVNKRLMVYNPSGDSKKWLDEVVLVNPRIVQLSDGTDVEIEGCLSFPDMNGDVQRSKWIKVEALTPKGRKVKKKFNGWEARIFQHEYDHLDGVVYIDRLSEKGRSDVQPRLDELIQDFGEGGAL 244          
BLAST of mRNA_F-serratus_M_contig6.16613.1 vs. uniprot
Match: A0A7S1U4W5_9STRA (Peptide deformylase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4W5_9STRA)

HSP 1 Score: 207 bits (527), Expect = 1.120e-65
Identity = 98/142 (69.01%), Postives = 115/142 (80.99%), Query Frame = 0
Query:    1 MFKVMYASKGVGLAAPQVGVNKRLMVFNPEGDPKNWLDEAVLVNPRIVATGKGKVIDEEGCLSFPGMRGNVERNNWVKVEAQNAKGKKIKKKYTDWTARIFQHEYDHLDGTVYIDHLTSEGRQKVQPVLDKLISDFGEGAAL 142
            MFKVMYA++GVGLAAPQVGVNKRLMV+NPEGD + WL E VLVNPRIV   +    + EGCLSFP M G VERN W+KVEAQN KGKK+KKK+T W ARIFQHEYDHLDG VY D L ++ +++VQ  LD+L++DFGEG AL
Sbjct:   66 MFKVMYAAQGVGLAAPQVGVNKRLMVYNPEGDARKWLAEVVLVNPRIVERSEAVDEESEGCLSFPDMDGKVERNKWIKVEAQNLKGKKLKKKFTGWEARIFQHEYDHLDGVVYPDRLDAKEKKRVQERLDELVADFGEGGAL 207          
BLAST of mRNA_F-serratus_M_contig6.16613.1 vs. uniprot
Match: A0A7S2PCD3_9STRA (Peptide deformylase n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PCD3_9STRA)

HSP 1 Score: 209 bits (531), Expect = 2.370e-65
Identity = 95/142 (66.90%), Postives = 114/142 (80.28%), Query Frame = 0
Query:    1 MFKVMYASKGVGLAAPQVGVNKRLMVFNPEGDPKNWLDEAVLVNPRIVATGKGKVIDEEGCLSFPGMRGNVERNNWVKVEAQNAKGKKIKKKYTDWTARIFQHEYDHLDGTVYIDHLTSEGRQKVQPVLDKLISDFGEGAAL 142
            MF VMYA+ GVGLAAPQVG+NKRLMV+N  GDPK W+ E ++VNP IV   +   ++EEGCLSFP M G+V+R+ W+KVEAQN KGKKIKKK+  W ARIFQHEYDHLDG VYID LT +GR+++QP LD+LI  FGEG AL
Sbjct:  135 MFLVMYATNGVGLAAPQVGINKRLMVYNEHGDPKKWMSEVIMVNPTIVEFSEASDVEEEGCLSFPDMGGDVDRSKWIKVEAQNLKGKKIKKKFRGWEARIFQHEYDHLDGKVYIDRLTEDGRKEIQPKLDELIDTFGEGGAL 276          
BLAST of mRNA_F-serratus_M_contig6.16613.1 vs. uniprot
Match: B8BSA6_THAPS (Peptide deformylase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BSA6_THAPS)

HSP 1 Score: 202 bits (515), Expect = 3.120e-64
Identity = 92/142 (64.79%), Postives = 113/142 (79.58%), Query Frame = 0
Query:    1 MFKVMYASKGVGLAAPQVGVNKRLMVFNPEGDPKNWLDEAVLVNPRIVATGKGKVIDEEGCLSFPGMRGNVERNNWVKVEAQNAKGKKIKKKYTDWTARIFQHEYDHLDGTVYIDHLTSEGRQKVQPVLDKLISDFGEGAAL 142
            MF VMYA+ G GLAAPQVG+NKRLMV+N  GD K W+ E ++VNP+IV       I++EGCLSFP M G+V+R+ W+KVEAQN KGKKIKKK+T W ARIFQHEYDHLDG VY+D L+ EGR++VQ  LD+L+ +FGEG AL
Sbjct:   39 MFLVMYATNGAGLAAPQVGINKRLMVYNESGDSKRWMQEVIMVNPKIVEFSSATDIEQEGCLSFPEMGGDVQRSKWIKVEAQNLKGKKIKKKFTGWEARIFQHEYDHLDGVVYVDRLSEEGRKEVQGRLDELVEEFGEGGAL 180          
BLAST of mRNA_F-serratus_M_contig6.16613.1 vs. uniprot
Match: A0A7S1YIG9_9STRA (Peptide deformylase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YIG9_9STRA)

HSP 1 Score: 206 bits (523), Expect = 3.530e-64
Identity = 98/143 (68.53%), Postives = 113/143 (79.02%), Query Frame = 0
Query:    1 MFKVMYASKGVGLAAPQVGVNKRLMVFNPEGDPKNWLDEAVLVNPRIVATGKGKVIDEEGCLSFPGMRGNVERNNWVKVEAQNAKGKKIKKKYTDWTARIFQHEYDHLDGTVYIDHLTSEGRQKVQPVLDKLISDF-GEGAAL 142
            MF VMYA+ GVGLAAPQVG+NKRLM+FN  GD   WLDE VLVNPRIV  G G  ++ EGCLSFPGM G V+RN W++VEA N +GKKIKKK+ DW ARIFQHEYDHLDGTVYIDHL  E R +VQP LD+LI ++ GE  A+
Sbjct:  131 MFLVMYAANGVGLAAPQVGINKRLMIFNEHGDKTKWLDEMVLVNPRIVKKGGGTDVETEGCLSFPGMNGPVQRNKWIQVEALNKRGKKIKKKFFDWEARIFQHEYDHLDGTVYIDHLAEEARAEVQPRLDELIEEYDGEDGAV 273          
BLAST of mRNA_F-serratus_M_contig6.16613.1 vs. uniprot
Match: K0T4T4_THAOC (Peptide deformylase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T4T4_THAOC)

HSP 1 Score: 201 bits (512), Expect = 2.190e-63
Identity = 91/142 (64.08%), Postives = 113/142 (79.58%), Query Frame = 0
Query:    1 MFKVMYASKGVGLAAPQVGVNKRLMVFNPEGDPKNWLDEAVLVNPRIVATGKGKVIDEEGCLSFPGMRGNVERNNWVKVEAQNAKGKKIKKKYTDWTARIFQHEYDHLDGTVYIDHLTSEGRQKVQPVLDKLISDFGEGAAL 142
            MF VMYA+ GVGLAAPQVG+NKRLMV+N  GDPK W+ E + VNP+IV     K I+ EGCLSFP M G+V+R+ W+K+EAQN KGKKIKKK+  W AR+FQHEYDHL+ TVYID LT EGR++VQP L++L+ +FG+G  L
Sbjct:   67 MFLVMYATNGVGLAAPQVGINKRLMVYNDTGDPKKWMKENIFVNPKIVEYSDAKDIETEGCLSFPDMNGDVQRSKWIKIEAQNLKGKKIKKKFKGWEARVFQHEYDHLERTVYIDRLTDEGRKEVQPRLNELVGEFGDGGEL 208          
BLAST of mRNA_F-serratus_M_contig6.16613.1 vs. uniprot
Match: A0A4D9D349_9STRA (Peptide deformylase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D349_9STRA)

HSP 1 Score: 201 bits (510), Expect = 2.250e-63
Identity = 98/142 (69.01%), Postives = 110/142 (77.46%), Query Frame = 0
Query:    1 MFKVMYASKGVGLAAPQVGVNKRLMVFNPEGDPKNWLDEAVLVNPRIVATGKGKVIDEEGCLSFPGMRGNVERNNWVKVEAQNAKGKKIKKKYTDWTARIFQHEYDHLDGTVYIDHLTSEGRQKVQPVLDKLISDFGEGAAL 142
            MFKVMYA  GVGLAAPQVGVN+RLMVFNP+GD   WL+E +L NP IV       I EEGCLSFPGM G+VER+  +KV  QNAKGKK  KK+ DW ARIFQHEYDHLDG +Y+D L  E +QKVQPVLDKL+SDFG G AL
Sbjct:   46 MFKVMYAMNGVGLAAPQVGVNQRLMVFNPQGDRLKWLNEVILCNPVIVEKSGKTDIMEEGCLSFPGMAGDVERSLTIKVTFQNAKGKKFTKKFRDWEARIFQHEYDHLDGVLYMDRLVPESKQKVQPVLDKLVSDFGPGGAL 187          
BLAST of mRNA_F-serratus_M_contig6.16613.1 vs. uniprot
Match: A0A7S3V6U4_9STRA (Peptide deformylase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V6U4_9STRA)

HSP 1 Score: 201 bits (512), Expect = 6.170e-63
Identity = 91/142 (64.08%), Postives = 115/142 (80.99%), Query Frame = 0
Query:    1 MFKVMYASKGVGLAAPQVGVNKRLMVFNPEGDPKNWLDEAVLVNPRIVATGKGKVIDEEGCLSFPGMRGNVERNNWVKVEAQNAKGKKIKKKYTDWTARIFQHEYDHLDGTVYIDHLTSEGRQKVQPVLDKLISDFGEGAAL 142
            MF VMYA++GVGLAAPQVG+NK++MV+N  GD K WL E V+VNP+IV   +GK ++ EGCLSFPGM G+V+R+ W+KVEAQN KGKK+KKK+  W ARIFQHEYDHLDGT+Y D LT EG+  V+  LD+L+++FGEG  L
Sbjct:  100 MFLVMYATQGVGLAAPQVGINKKMMVYNETGDKKKWLKETVMVNPKIVDFSEGKDVESEGCLSFPGMNGDVQRSKWIKVEAQNLKGKKMKKKFKGWEARIFQHEYDHLDGTLYPDRLTDEGKDLVKQRLDELVTEFGEGGEL 241          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6.16613.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJW5_9PHAE2.490e-8484.51Peptide deformylase n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A1Z5KQL3_FISSO1.730e-6769.72Peptide deformylase n=2 Tax=Fistulifera solaris Ta... [more]
A0A7S1GJC1_CYCTE6.260e-6669.01Peptide deformylase n=1 Tax=Cyclophora tenuis TaxI... [more]
A0A7S1U4W5_9STRA1.120e-6569.01Peptide deformylase n=1 Tax=Phaeomonas parva TaxID... [more]
A0A7S2PCD3_9STRA2.370e-6566.90Peptide deformylase n=2 Tax=Skeletonema marinoi Ta... [more]
B8BSA6_THAPS3.120e-6464.79Peptide deformylase (Fragment) n=1 Tax=Thalassiosi... [more]
A0A7S1YIG9_9STRA3.530e-6468.53Peptide deformylase n=1 Tax=Grammatophora oceanica... [more]
K0T4T4_THAOC2.190e-6364.08Peptide deformylase n=1 Tax=Thalassiosira oceanica... [more]
A0A4D9D349_9STRA2.250e-6369.01Peptide deformylase n=1 Tax=Nannochloropsis salina... [more]
A0A7S3V6U4_9STRA6.170e-6364.08Peptide deformylase n=1 Tax=Chaetoceros debilis Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023635Peptide deformylasePRINTSPR01576PDEFORMYLASEcoord: 90..119
score: 39.32
coord: 71..89
score: 32.16
coord: 59..70
score: 55.86
IPR023635Peptide deformylaseTIGRFAMTIGR00079TIGR00079coord: 1..126
e-value: 7.5E-40
score: 134.1
IPR023635Peptide deformylasePFAMPF01327Pep_deformylasecoord: 1..121
e-value: 1.6E-43
score: 148.1
IPR023635Peptide deformylasePIRSFPIRSF004749Pep_defcoord: 1..138
e-value: 1.3E-46
score: 156.6
IPR023635Peptide deformylasePANTHERPTHR10458PEPTIDE DEFORMYLASEcoord: 1..130
IPR023635Peptide deformylaseHAMAPMF_00163Pep_deformylasecoord: 1..132
score: 18.421
IPR036821Peptide deformylase superfamilyGENE3D3.90.45.10coord: 1..140
e-value: 7.8E-52
score: 176.8
IPR036821Peptide deformylase superfamilySUPERFAMILY56420Peptide deformylasecoord: 1..131
NoneNo IPR availablePANTHERPTHR10458:SF2PEPTIDE DEFORMYLASEcoord: 1..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6contigF-serratus_M_contig6:875348..881148 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6.16613.1mRNA_F-serratus_M_contig6.16613.1Fucus serratus malemRNAF-serratus_M_contig6 875223..881945 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6.16613.1 ID=prot_F-serratus_M_contig6.16613.1|Name=mRNA_F-serratus_M_contig6.16613.1|organism=Fucus serratus male|type=polypeptide|length=143bp
MFKVMYASKGVGLAAPQVGVNKRLMVFNPEGDPKNWLDEAVLVNPRIVAT
GKGKVIDEEGCLSFPGMRGNVERNNWVKVEAQNAKGKKIKKKYTDWTARI
FQHEYDHLDGTVYIDHLTSEGRQKVQPVLDKLISDFGEGAAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023635Peptide_deformylase
IPR036821Peptide_deformylase_sf