prot_F-serratus_M_contig1450.3206.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1450.3206.1
Unique Name	prot_F-serratus_M_contig1450.3206.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	283

Homology

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BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Match: D7G294_ECTSI (18S rRNA aminocarboxypropyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G294_ECTSI)

HSP 1 Score: 371 bits (953), Expect = 3.380e-126
Identity = 178/216 (82.41%), Postives = 199/216 (92.13%), Query Frame = 0

Query:   54 AREMIERERDKGTKVETSLSVRLRMWDFEQCDVKRCTGRKLCRLGLVKEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSVMDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERCEEEASSRREGASLEDMMPPSYSDEDESG 269
            AREMI+RERD+  ++  S++V LRMWDFEQCDVK+CTGRKLCRLGLV+EMELGAPFSGLVLSPNG  TVSPAD+E++ETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYG+PMKL+CAEAIAATLYIVGHQDEAV VMD+FGWGAEFLRVN +VL+ YAAC DGAEVVKAQ  +L RCEEEA+SRR+  S+EDMMPPSYSDE+E G
Sbjct:   57 AREMIDRERDESGELAQSITVSLRMWDFEQCDVKKCTGRKLCRLGLVREMELGAPFSGLVLSPNGELTVSPADREVVETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGKPMKLTCAEAIAATLYIVGHQDEAVKVMDQFGWGAEFLRVNEDVLETYAACADGAEVVKAQAAFLARCEEEANSRRDAVSMEDMMPPSYSDEEEYG 272

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BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Match: A0A835YJ70_9STRA (18S rRNA aminocarboxypropyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ70_9STRA)

HSP 1 Score: 305 bits (780), Expect = 6.350e-100
Identity = 150/241 (62.24%), Postives = 181/241 (75.10%), Query Frame = 0

Query:   37 KIQSSNRSRISHHGRFG---AREMIERERDKGTKVETSLSVRLRMWDFEQCDVKRCTGRKLCRLGLVKEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSVMDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERCEEEASSRREGASLEDMMPPSYSDEDESGSDSNG 274
            K   + RS   H G F    A E  + +          L VRLRMWDFEQCD KRCTGR+LCRLG +KEM+LGAPF GLVLSPNG  TVSP D+EI++TLG+SVIDCSWARLD++PFHQMRRGHHRLLPFLVAANPVNYG+P KL+CAEA+AATL IVG +++   VMD+FGWG EFL++NA+VLD YAAC+ GAEV+ AQ  YL +CE EA++RR     +DM+PP+Y   DE  S+  G
Sbjct:   36 KRSVATRSGGHHAGYFSGGRAAETADEQEGAAAAAAKGLGVRLRMWDFEQCDPKRCTGRRLCRLGFIKEMDLGAPFQGLVLSPNGEKTVSPEDREIVDTLGISVIDCSWARLDDVPFHQMRRGHHRLLPFLVAANPVNYGKPFKLTCAEALAATLVIVGLREQGALVMDQFGWGPEFLKINADVLDRYAACSSGAEVITAQAAYLAQCEAEAAARRRP---DDMLPPAYDSSDEGESEGEG 273

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BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Match: G4ZJA7_PHYSP (18S rRNA aminocarboxypropyltransferase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZJA7_PHYSP)

HSP 1 Score: 255 bits (652), Expect = 2.650e-80
Identity = 128/196 (65.31%), Postives = 150/196 (76.53%), Query Frame = 0

Query:   71 SLSVRLRMWDFEQCDVKRCTGRKLCRLGLVKEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSVMDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERCEEEASSRREGASLEDMMPPSYSDED 266
            +  V LRMWDF+QCD KRCTGRKLCRLG +K M+ GA F GLVLSP G S VSPAD+ I+E  G+SVIDCSWA++ E+P+ Q+R G HRLLPFLVAAN VNYGRP KLSCAEAIAATLYIVG +DEAV +MDEF WGAEFL++NA+ L+AYAAC D A+VV AQ  YL  C+ E   R     L+ MM PS   +D
Sbjct:   41 AFPVTLRMWDFQQCDSKRCTGRKLCRLGYIKSMKPGAHFRGLVLSPAGESIVSPADRGIVEGTGISVIDCSWAKVQELPYKQLRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGLKDEAVQLMDEFSWGAEFLKINADCLEAYAACEDSAQVVAAQEAYLAACQAENEQR-----LQRMMLPSLESDD 231

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BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Match: A0A8K1C8Q2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8Q2_PYTOL)

HSP 1 Score: 253 bits (647), Expect = 4.490e-79
Identity = 126/199 (63.32%), Postives = 150/199 (75.38%), Query Frame = 0

Query:   50 GRFGAREMIERERDKGTKVETSLSVRLRMWDFEQCDVKRCTGRKLCRLGLVKEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSVMDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERCEEEASSR 248
            G    RE  E E +   K   S  V LRMWDF+QCD KRCTGRK+CRLG VK M+ G PF G+VLSP G   VSPAD EI+ +LG+SVIDCSWA++ E+P+ Q+R G+HRLLPFLVAAN VNYGRP KL+CAEAIAATLYIVG +DEAV V++EF WG EFL++N E L+AYAAC   A+VV+AQ  YL  CEEE  +R
Sbjct:   35 GAAAPRERGEEETEINFK-RRSFPVTLRMWDFQQCDSKRCTGRKMCRLGYVKSMKPGQPFRGIVLSPAGEQAVSPADLEIVTSLGISVIDCSWAKVQELPYKQLRSGYHRLLPFLVAANSVNYGRPHKLTCAEAIAATLYIVGMKDEAVQVLEEFQWGMEFLKINFECLEAYAACETSADVVEAQNAYLAACEEELRAR 232

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BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Match: A0A3M6VVZ0_9STRA (18S rRNA aminocarboxypropyltransferase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VVZ0_9STRA)

HSP 1 Score: 252 bits (644), Expect = 1.270e-78
Identity = 127/210 (60.48%), Postives = 152/210 (72.38%), Query Frame = 0

Query:   59 ERERDKGTKVETS--------------LSVRLRMWDFEQCDVKRCTGRKLCRLGLVKEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSVMDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERCEEEASSRREGASL 254
            +R R+K T+  TS                V LRMWDF+QCD KRCTGRKLCRLG +K M+ GA F GLVLSP G   VS AD +++ + G+SVIDCSWA++ E+P+ Q+R G HRLLPFLVAAN VNYGRP KLSCAEAIAATLYIVG QDEA+ VMDEF WGAEFL++NA+ L AYAACT+ AEVV+AQ  YL  C+ E   R++   L
Sbjct:   15 DRRRNKYTEAITSRGDEESETNYRRRAFPVTLRMWDFQQCDAKRCTGRKLCRLGYIKSMKPGAHFRGLVLSPAGEQAVSRADLDLVTSSGISVIDCSWAKVQELPYKQLRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGLQDEAIQVMDEFSWGAEFLKINADCLQAYAACTNSAEVVEAQNAYLAACQTEQKERQQHMDL 224

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BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Match: A0A2D4BYV1_PYTIN (18S rRNA aminocarboxypropyltransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BYV1_PYTIN)

HSP 1 Score: 249 bits (635), Expect = 2.550e-77
Identity = 124/223 (55.61%), Postives = 158/223 (70.85%), Query Frame = 0

Query:   30 GASGRRPKIQSSNRSRISHHGRFGAREMIERERDKGTKV----ETSLSVRLRMWDFEQCDVKRCTGRKLCRLGLVKEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSVMDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERCEEEASSR 248
            GA GR+P+      + +           + +ER++G         S  + LRMWDF+QCD KRCTGRKLCRL  VK M+ G PF G+VLSP G   +SPAD+EI+ETLG+SVIDCSWA++ E+P+ Q+R G+HRLLPF   AN VNYG+P KLSCAEAIAATLYIVG +DEAV +M+EF WG EFL++N + L+AYAAC + A+VV+AQ  YL  CEEE  +R
Sbjct:   19 GAGGRQPRKSRGRDAPV-----------VSQEREEGESEISFKRRSFPITLRMWDFQQCDSKRCTGRKLCRLAYVKSMKPGQPFRGIVLSPAGEQALSPADREIVETLGISVIDCSWAKVQELPYKQLRSGYHRLLPF--HANTVNYGKPYKLSCAEAIAATLYIVGMKDEAVQIMEEFSWGMEFLKINMDCLEAYAACENSAQVVEAQNAYLAACEEEHKAR 228

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BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Match: A0A6A3KBB7_9STRA (18S rRNA aminocarboxypropyltransferase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3KBB7_9STRA)

HSP 1 Score: 249 bits (635), Expect = 3.120e-77
Identity = 119/178 (66.85%), Postives = 142/178 (79.78%), Query Frame = 0

Query:   71 SLSVRLRMWDFEQCDVKRCTGRKLCRLGLVKEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSVMDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERCEEEASSR 248
            +  V LRMWDF+QCD KRCTGRKLCRLG ++ M+ GA F GLVLSP G   VSPAD+ I++  G+S IDCSWA++ E+P+ Q+R G HRLLPFLVAAN VNYGRP KLSCAEAIAATLYIVG +DEAV +MDEF WGAEFL++NA+ L+AYAAC + AEVV+AQT YL  C+ E   R
Sbjct:   41 AFPVTLRMWDFQQCDSKRCTGRKLCRLGYIQSMKPGAHFRGLVLSPAGEQVVSPADRGIVQGSGISAIDCSWAKVQELPYKQVRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGLKDEAVQLMDEFSWGAEFLKINADCLEAYAACENSAEVVEAQTAYLTACQTEHEQR 218

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BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Match: D0P2X0_PHYIT (18S rRNA aminocarboxypropyltransferase n=11 Tax=Phytophthora TaxID=4783 RepID=D0P2X0_PHYIT)

HSP 1 Score: 246 bits (628), Expect = 6.780e-77
Identity = 118/179 (65.92%), Postives = 141/179 (78.77%), Query Frame = 0

Query:   76 LRMWDFEQCDVKRCTGRKLCRLGLVKEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSVMDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERCEEEASSRREGASL 254
            LRMWDF+QCD KRCTGRKLCRLG +K M+ GA F GLVLSP G   VSPAD+ I+E  G+SVIDCSWA++ E+P+ Q+R G HRLLPFLVAAN VNYGRP KLSCAEAIAATLYIVG + EA  +MDEF WGAEFL++NA+ L+AY+ACT+  EVV+AQ  YL  C+ E   R +  +L
Sbjct:    3 LRMWDFQQCDSKRCTGRKLCRLGYIKSMKPGAHFRGLVLSPAGEQIVSPADRTIVEGTGISVIDCSWAKVQELPYKQLRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGLKQEATQLMDEFSWGAEFLKINADCLEAYSACTNSTEVVEAQDAYLTACQTEHMERLQRINL 181

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BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Match: M4BTS6_HYAAE (18S rRNA aminocarboxypropyltransferase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BTS6_HYAAE)

HSP 1 Score: 247 bits (631), Expect = 1.020e-76
Identity = 119/179 (66.48%), Postives = 140/179 (78.21%), Query Frame = 0

Query:   76 LRMWDFEQCDVKRCTGRKLCRLGLVKEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSVMDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERCEEEASSRREGASL 254
            LRMWDF+QCD KRCTGRKLCRLG +K M+ G  F GLVLSP G   VS AD+E++   G+SVIDCSWA++ E+P+ Q+R G HRLLPFLVAAN VNYGRP KLSCAEAIAATLYIVG QDEA  VMDEF WGAEFL++NA+ L AYAAC + A+VVKAQ +YL  C+ E   R++   L
Sbjct:   46 LRMWDFQQCDAKRCTGRKLCRLGYIKSMKPGMHFRGLVLSPAGEQAVSAADRELVMGTGISVIDCSWAKVQELPYKQLRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGCQDEARQVMDEFSWGAEFLKINADCLAAYAACENSAQVVKAQNDYLAACQSEHKERQQQMKL 224

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BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Match: A0A7R9UC21_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UC21_9STRA)

HSP 1 Score: 243 bits (621), Expect = 1.100e-76
Identity = 114/171 (66.67%), Postives = 137/171 (80.12%), Query Frame = 0

Query:   71 SLSVRLRMWDFEQCDVKRCTGRKLCRLGLVKEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSVMDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERC 241
            +  V+LRMWDF QCD KRCTGR+L R GL++ M L A F GLVLSP G   VSPAD+ +++TLG+SVIDCSW RLD++PF ++R GHHRLLPFLVAANPVNYGRP KLSCAEA+AATL IVGHQ+ A +++D FGWG EFL++NAE+L  YAAC    EVV+AQ  YLE C
Sbjct:   15 NFPVKLRMWDFAQCDAKRCTGRRLERFGLLRNMPLTAKFQGLVLSPLGKLIVSPADRGLVDTLGISVIDCSWNRLDDVPFRRLRSGHHRLLPFLVAANPVNYGRPSKLSCAEALAATLVIVGHQELAETLLDRFGWGREFLKINAELLARYAACESAEEVVQAQDAYLEAC 185

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G294_ECTSI	3.380e-126	82.41	18S rRNA aminocarboxypropyltransferase n=2 Tax=Ect...	[more]
A0A835YJ70_9STRA	6.350e-100	62.24	18S rRNA aminocarboxypropyltransferase n=1 Tax=Tri...	[more]
G4ZJA7_PHYSP	2.650e-80	65.31	18S rRNA aminocarboxypropyltransferase n=1 Tax=Phy...	[more]
A0A8K1C8Q2_PYTOL	4.490e-79	63.32	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A3M6VVZ0_9STRA	1.270e-78	60.48	18S rRNA aminocarboxypropyltransferase n=2 Tax=Per...	[more]
A0A2D4BYV1_PYTIN	2.550e-77	55.61	18S rRNA aminocarboxypropyltransferase n=1 Tax=Pyt...	[more]
A0A6A3KBB7_9STRA	3.120e-77	66.85	18S rRNA aminocarboxypropyltransferase n=2 Tax=Phy...	[more]
D0P2X0_PHYIT	6.780e-77	65.92	18S rRNA aminocarboxypropyltransferase n=11 Tax=Ph...	[more]
M4BTS6_HYAAE	1.020e-76	66.48	18S rRNA aminocarboxypropyltransferase n=1 Tax=Hya...	[more]
A0A7R9UC21_9STRA	1.100e-76	66.67	Hypothetical protein (Fragment) n=1 Tax=Pinguiococ...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007177	Ribosome biogenesis protein, C-terminal	PFAM	PF04034	Ribo_biogen_C	coord: 112..238 e-value: 7.5E-53 score: 177.6
IPR007209	RNase L inhibitor RLI, possible metal-binding domain	PFAM	PF04068	RLI	coord: 74..105 e-value: 2.3E-10 score: 40.1
IPR022968	Ribosome biogenesis protein	PANTHER	PTHR20426	FAMILY NOT NAMED	coord: 60..257
IPR022968	Ribosome biogenesis protein	HAMAP	MF_01116	TSR3	coord: 74..239 score: 39.958
None	No IPR available	PRODOM	PD016638		coord: 94..237 e-value: 3.0E-45 score: 459.0

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1450	contig	F-serratus_M_contig1450:117808..120832 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1450.3206.1	mRNA_F-serratus_M_contig1450.3206.1	Fucus serratus male	mRNA	F-serratus_M_contig1450 117808..120832 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1450.3206.1 ID=prot_F-serratus_M_contig1450.3206.1|Name=mRNA_F-serratus_M_contig1450.3206.1|organism=Fucus serratus male|type=polypeptide|length=283bp
MERGRPLKGKGGGKRGKGKNHSGGGGGDGGASGRRPKIQSSNRSRISHHG
RFGAREMIERERDKGTKVETSLSVRLRMWDFEQCDVKRCTGRKLCRLGLV
KEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPF
HQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSV
MDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERCEEEASSRRE
GASLEDMMPPSYSDEDESGSDSNGDDARDLAEN

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007177	TDD_dom
IPR007209	RNaseL-inhib_metal-bd_dom
IPR022968	Rbsm_biogenesis