mRNA_F-serratus_M_contig1450.3206.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1450.3206.1
Unique NamemRNA_F-serratus_M_contig1450.3206.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Match: D7G294_ECTSI (18S rRNA aminocarboxypropyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G294_ECTSI)

HSP 1 Score: 371 bits (953), Expect = 3.380e-126
Identity = 178/216 (82.41%), Postives = 199/216 (92.13%), Query Frame = 1
Query:  160 AREMIERERDKGTKVETSLSVRLRMWDFEQCDVKRCTGRKLCRLGLVKEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSVMDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERCEEEASSRREGASLEDMMPPSYSDEDESG 807
            AREMI+RERD+  ++  S++V LRMWDFEQCDVK+CTGRKLCRLGLV+EMELGAPFSGLVLSPNG  TVSPAD+E++ETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYG+PMKL+CAEAIAATLYIVGHQDEAV VMD+FGWGAEFLRVN +VL+ YAAC DGAEVVKAQ  +L RCEEEA+SRR+  S+EDMMPPSYSDE+E G
Sbjct:   57 AREMIDRERDESGELAQSITVSLRMWDFEQCDVKKCTGRKLCRLGLVREMELGAPFSGLVLSPNGELTVSPADREVVETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGKPMKLTCAEAIAATLYIVGHQDEAVKVMDQFGWGAEFLRVNEDVLETYAACADGAEVVKAQAAFLARCEEEANSRRDAVSMEDMMPPSYSDEEEYG 272          
BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Match: A0A835YJ70_9STRA (18S rRNA aminocarboxypropyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ70_9STRA)

HSP 1 Score: 305 bits (780), Expect = 6.350e-100
Identity = 150/241 (62.24%), Postives = 181/241 (75.10%), Query Frame = 1
Query:  109 KIQSSNRSRISHHGRFG---AREMIERERDKGTKVETSLSVRLRMWDFEQCDVKRCTGRKLCRLGLVKEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSVMDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERCEEEASSRREGASLEDMMPPSYSDEDESGSDSNG 822
            K   + RS   H G F    A E  + +          L VRLRMWDFEQCD KRCTGR+LCRLG +KEM+LGAPF GLVLSPNG  TVSP D+EI++TLG+SVIDCSWARLD++PFHQMRRGHHRLLPFLVAANPVNYG+P KL+CAEA+AATL IVG +++   VMD+FGWG EFL++NA+VLD YAAC+ GAEV+ AQ  YL +CE EA++RR     +DM+PP+Y   DE  S+  G
Sbjct:   36 KRSVATRSGGHHAGYFSGGRAAETADEQEGAAAAAAKGLGVRLRMWDFEQCDPKRCTGRRLCRLGFIKEMDLGAPFQGLVLSPNGEKTVSPEDREIVDTLGISVIDCSWARLDDVPFHQMRRGHHRLLPFLVAANPVNYGKPFKLTCAEALAATLVIVGLREQGALVMDQFGWGPEFLKINADVLDRYAACSSGAEVITAQAAYLAQCEAEAAARRRP---DDMLPPAYDSSDEGESEGEG 273          
BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Match: G4ZJA7_PHYSP (18S rRNA aminocarboxypropyltransferase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZJA7_PHYSP)

HSP 1 Score: 255 bits (652), Expect = 2.650e-80
Identity = 128/196 (65.31%), Postives = 150/196 (76.53%), Query Frame = 1
Query:  211 SLSVRLRMWDFEQCDVKRCTGRKLCRLGLVKEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSVMDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERCEEEASSRREGASLEDMMPPSYSDED 798
            +  V LRMWDF+QCD KRCTGRKLCRLG +K M+ GA F GLVLSP G S VSPAD+ I+E  G+SVIDCSWA++ E+P+ Q+R G HRLLPFLVAAN VNYGRP KLSCAEAIAATLYIVG +DEAV +MDEF WGAEFL++NA+ L+AYAAC D A+VV AQ  YL  C+ E   R     L+ MM PS   +D
Sbjct:   41 AFPVTLRMWDFQQCDSKRCTGRKLCRLGYIKSMKPGAHFRGLVLSPAGESIVSPADRGIVEGTGISVIDCSWAKVQELPYKQLRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGLKDEAVQLMDEFSWGAEFLKINADCLEAYAACEDSAQVVAAQEAYLAACQAENEQR-----LQRMMLPSLESDD 231          
BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Match: A0A8K1C8Q2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8Q2_PYTOL)

HSP 1 Score: 253 bits (647), Expect = 4.490e-79
Identity = 126/199 (63.32%), Postives = 150/199 (75.38%), Query Frame = 1
Query:  148 GRFGAREMIERERDKGTKVETSLSVRLRMWDFEQCDVKRCTGRKLCRLGLVKEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSVMDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERCEEEASSR 744
            G    RE  E E +   K   S  V LRMWDF+QCD KRCTGRK+CRLG VK M+ G PF G+VLSP G   VSPAD EI+ +LG+SVIDCSWA++ E+P+ Q+R G+HRLLPFLVAAN VNYGRP KL+CAEAIAATLYIVG +DEAV V++EF WG EFL++N E L+AYAAC   A+VV+AQ  YL  CEEE  +R
Sbjct:   35 GAAAPRERGEEETEINFK-RRSFPVTLRMWDFQQCDSKRCTGRKMCRLGYVKSMKPGQPFRGIVLSPAGEQAVSPADLEIVTSLGISVIDCSWAKVQELPYKQLRSGYHRLLPFLVAANSVNYGRPHKLTCAEAIAATLYIVGMKDEAVQVLEEFQWGMEFLKINFECLEAYAACETSADVVEAQNAYLAACEEELRAR 232          
BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Match: A0A3M6VVZ0_9STRA (18S rRNA aminocarboxypropyltransferase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VVZ0_9STRA)

HSP 1 Score: 252 bits (644), Expect = 1.270e-78
Identity = 127/210 (60.48%), Postives = 152/210 (72.38%), Query Frame = 1
Query:  175 ERERDKGTKVETS--------------LSVRLRMWDFEQCDVKRCTGRKLCRLGLVKEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSVMDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERCEEEASSRREGASL 762
            +R R+K T+  TS                V LRMWDF+QCD KRCTGRKLCRLG +K M+ GA F GLVLSP G   VS AD +++ + G+SVIDCSWA++ E+P+ Q+R G HRLLPFLVAAN VNYGRP KLSCAEAIAATLYIVG QDEA+ VMDEF WGAEFL++NA+ L AYAACT+ AEVV+AQ  YL  C+ E   R++   L
Sbjct:   15 DRRRNKYTEAITSRGDEESETNYRRRAFPVTLRMWDFQQCDAKRCTGRKLCRLGYIKSMKPGAHFRGLVLSPAGEQAVSRADLDLVTSSGISVIDCSWAKVQELPYKQLRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGLQDEAIQVMDEFSWGAEFLKINADCLQAYAACTNSAEVVEAQNAYLAACQTEQKERQQHMDL 224          
BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Match: A0A2D4BYV1_PYTIN (18S rRNA aminocarboxypropyltransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BYV1_PYTIN)

HSP 1 Score: 249 bits (635), Expect = 2.550e-77
Identity = 124/223 (55.61%), Postives = 158/223 (70.85%), Query Frame = 1
Query:   88 GASGRRPKIQSSNRSRISHHGRFGAREMIERERDKGTKV----ETSLSVRLRMWDFEQCDVKRCTGRKLCRLGLVKEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSVMDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERCEEEASSR 744
            GA GR+P+      + +           + +ER++G         S  + LRMWDF+QCD KRCTGRKLCRL  VK M+ G PF G+VLSP G   +SPAD+EI+ETLG+SVIDCSWA++ E+P+ Q+R G+HRLLPF   AN VNYG+P KLSCAEAIAATLYIVG +DEAV +M+EF WG EFL++N + L+AYAAC + A+VV+AQ  YL  CEEE  +R
Sbjct:   19 GAGGRQPRKSRGRDAPV-----------VSQEREEGESEISFKRRSFPITLRMWDFQQCDSKRCTGRKLCRLAYVKSMKPGQPFRGIVLSPAGEQALSPADREIVETLGISVIDCSWAKVQELPYKQLRSGYHRLLPF--HANTVNYGKPYKLSCAEAIAATLYIVGMKDEAVQIMEEFSWGMEFLKINMDCLEAYAACENSAQVVEAQNAYLAACEEEHKAR 228          
BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Match: A0A6A3KBB7_9STRA (18S rRNA aminocarboxypropyltransferase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3KBB7_9STRA)

HSP 1 Score: 249 bits (635), Expect = 3.120e-77
Identity = 119/178 (66.85%), Postives = 142/178 (79.78%), Query Frame = 1
Query:  211 SLSVRLRMWDFEQCDVKRCTGRKLCRLGLVKEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSVMDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERCEEEASSR 744
            +  V LRMWDF+QCD KRCTGRKLCRLG ++ M+ GA F GLVLSP G   VSPAD+ I++  G+S IDCSWA++ E+P+ Q+R G HRLLPFLVAAN VNYGRP KLSCAEAIAATLYIVG +DEAV +MDEF WGAEFL++NA+ L+AYAAC + AEVV+AQT YL  C+ E   R
Sbjct:   41 AFPVTLRMWDFQQCDSKRCTGRKLCRLGYIQSMKPGAHFRGLVLSPAGEQVVSPADRGIVQGSGISAIDCSWAKVQELPYKQVRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGLKDEAVQLMDEFSWGAEFLKINADCLEAYAACENSAEVVEAQTAYLTACQTEHEQR 218          
BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Match: D0P2X0_PHYIT (18S rRNA aminocarboxypropyltransferase n=11 Tax=Phytophthora TaxID=4783 RepID=D0P2X0_PHYIT)

HSP 1 Score: 246 bits (628), Expect = 6.780e-77
Identity = 118/179 (65.92%), Postives = 141/179 (78.77%), Query Frame = 1
Query:  226 LRMWDFEQCDVKRCTGRKLCRLGLVKEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSVMDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERCEEEASSRREGASL 762
            LRMWDF+QCD KRCTGRKLCRLG +K M+ GA F GLVLSP G   VSPAD+ I+E  G+SVIDCSWA++ E+P+ Q+R G HRLLPFLVAAN VNYGRP KLSCAEAIAATLYIVG + EA  +MDEF WGAEFL++NA+ L+AY+ACT+  EVV+AQ  YL  C+ E   R +  +L
Sbjct:    3 LRMWDFQQCDSKRCTGRKLCRLGYIKSMKPGAHFRGLVLSPAGEQIVSPADRTIVEGTGISVIDCSWAKVQELPYKQLRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGLKQEATQLMDEFSWGAEFLKINADCLEAYSACTNSTEVVEAQDAYLTACQTEHMERLQRINL 181          
BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Match: M4BTS6_HYAAE (18S rRNA aminocarboxypropyltransferase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BTS6_HYAAE)

HSP 1 Score: 247 bits (631), Expect = 1.020e-76
Identity = 119/179 (66.48%), Postives = 140/179 (78.21%), Query Frame = 1
Query:  226 LRMWDFEQCDVKRCTGRKLCRLGLVKEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSVMDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERCEEEASSRREGASL 762
            LRMWDF+QCD KRCTGRKLCRLG +K M+ G  F GLVLSP G   VS AD+E++   G+SVIDCSWA++ E+P+ Q+R G HRLLPFLVAAN VNYGRP KLSCAEAIAATLYIVG QDEA  VMDEF WGAEFL++NA+ L AYAAC + A+VVKAQ +YL  C+ E   R++   L
Sbjct:   46 LRMWDFQQCDAKRCTGRKLCRLGYIKSMKPGMHFRGLVLSPAGEQAVSAADRELVMGTGISVIDCSWAKVQELPYKQLRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGCQDEARQVMDEFSWGAEFLKINADCLAAYAACENSAQVVKAQNDYLAACQSEHKERQQQMKL 224          
BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Match: A0A7R9UC21_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UC21_9STRA)

HSP 1 Score: 243 bits (621), Expect = 1.100e-76
Identity = 114/171 (66.67%), Postives = 137/171 (80.12%), Query Frame = 1
Query:  211 SLSVRLRMWDFEQCDVKRCTGRKLCRLGLVKEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSVMDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERC 723
            +  V+LRMWDF QCD KRCTGR+L R GL++ M L A F GLVLSP G   VSPAD+ +++TLG+SVIDCSW RLD++PF ++R GHHRLLPFLVAANPVNYGRP KLSCAEA+AATL IVGHQ+ A +++D FGWG EFL++NAE+L  YAAC    EVV+AQ  YLE C
Sbjct:   15 NFPVKLRMWDFAQCDAKRCTGRRLERFGLLRNMPLTAKFQGLVLSPLGKLIVSPADRGLVDTLGISVIDCSWNRLDDVPFRRLRSGHHRLLPFLVAANPVNYGRPSKLSCAEALAATLVIVGHQELAETLLDRFGWGREFLKINAELLARYAACESAEEVVQAQDAYLEAC 185          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G294_ECTSI3.380e-12682.4118S rRNA aminocarboxypropyltransferase n=2 Tax=Ect... [more]
A0A835YJ70_9STRA6.350e-10062.2418S rRNA aminocarboxypropyltransferase n=1 Tax=Tri... [more]
G4ZJA7_PHYSP2.650e-8065.3118S rRNA aminocarboxypropyltransferase n=1 Tax=Phy... [more]
A0A8K1C8Q2_PYTOL4.490e-7963.32Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3M6VVZ0_9STRA1.270e-7860.4818S rRNA aminocarboxypropyltransferase n=2 Tax=Per... [more]
A0A2D4BYV1_PYTIN2.550e-7755.6118S rRNA aminocarboxypropyltransferase n=1 Tax=Pyt... [more]
A0A6A3KBB7_9STRA3.120e-7766.8518S rRNA aminocarboxypropyltransferase n=2 Tax=Phy... [more]
D0P2X0_PHYIT6.780e-7765.9218S rRNA aminocarboxypropyltransferase n=11 Tax=Ph... [more]
M4BTS6_HYAAE1.020e-7666.4818S rRNA aminocarboxypropyltransferase n=1 Tax=Hya... [more]
A0A7R9UC21_9STRA1.100e-7666.67Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1450contigF-serratus_M_contig1450:117808..120832 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score372.1
Seed ortholog evalue2.3e-100
Seed eggNOG ortholog2880.D7G294
Preferred nameTSR3
KEGG koko:K09140
Hectar predicted targeting categoryother localisation
GOsGO:0000154,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0022613,GO:0030490,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0071704,GO:0071840,GO:0090304,GO:1901360
EggNOG free text desc.rRNA processing
EggNOG OGsCOG2042@1,KOG3154@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Exons7
Model size849
Cds size849
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929436.138785-CDS-F-serratus_M_contig1450:117807..1179951622929436.138785-CDS-F-serratus_M_contig1450:117807..117995Fucus serratus maleCDSF-serratus_M_contig1450 117808..117995 +
1690962851.192641-CDS-F-serratus_M_contig1450:117807..1179951690962851.192641-CDS-F-serratus_M_contig1450:117807..117995Fucus serratus maleCDSF-serratus_M_contig1450 117808..117995 +
1622929436.1526358-CDS-F-serratus_M_contig1450:118043..1181471622929436.1526358-CDS-F-serratus_M_contig1450:118043..118147Fucus serratus maleCDSF-serratus_M_contig1450 118044..118147 +
1690962851.202231-CDS-F-serratus_M_contig1450:118043..1181471690962851.202231-CDS-F-serratus_M_contig1450:118043..118147Fucus serratus maleCDSF-serratus_M_contig1450 118044..118147 +
1622929436.1643064-CDS-F-serratus_M_contig1450:118752..1188411622929436.1643064-CDS-F-serratus_M_contig1450:118752..118841Fucus serratus maleCDSF-serratus_M_contig1450 118753..118841 +
1690962851.2099156-CDS-F-serratus_M_contig1450:118752..1188411690962851.2099156-CDS-F-serratus_M_contig1450:118752..118841Fucus serratus maleCDSF-serratus_M_contig1450 118753..118841 +
1622929436.1810467-CDS-F-serratus_M_contig1450:119281..1193561622929436.1810467-CDS-F-serratus_M_contig1450:119281..119356Fucus serratus maleCDSF-serratus_M_contig1450 119282..119356 +
1690962851.2175298-CDS-F-serratus_M_contig1450:119281..1193561690962851.2175298-CDS-F-serratus_M_contig1450:119281..119356Fucus serratus maleCDSF-serratus_M_contig1450 119282..119356 +
1622929436.2079773-CDS-F-serratus_M_contig1450:119991..1201171622929436.2079773-CDS-F-serratus_M_contig1450:119991..120117Fucus serratus maleCDSF-serratus_M_contig1450 119992..120117 +
1690962851.2252069-CDS-F-serratus_M_contig1450:119991..1201171690962851.2252069-CDS-F-serratus_M_contig1450:119991..120117Fucus serratus maleCDSF-serratus_M_contig1450 119992..120117 +
1622929436.2238114-CDS-F-serratus_M_contig1450:120273..1203931622929436.2238114-CDS-F-serratus_M_contig1450:120273..120393Fucus serratus maleCDSF-serratus_M_contig1450 120274..120393 +
1690962851.2330403-CDS-F-serratus_M_contig1450:120273..1203931690962851.2330403-CDS-F-serratus_M_contig1450:120273..120393Fucus serratus maleCDSF-serratus_M_contig1450 120274..120393 +
1622929436.235562-CDS-F-serratus_M_contig1450:120685..1208321622929436.235562-CDS-F-serratus_M_contig1450:120685..120832Fucus serratus maleCDSF-serratus_M_contig1450 120686..120832 +
1690962851.249773-CDS-F-serratus_M_contig1450:120685..1208321690962851.249773-CDS-F-serratus_M_contig1450:120685..120832Fucus serratus maleCDSF-serratus_M_contig1450 120686..120832 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1450.3206.1prot_F-serratus_M_contig1450.3206.1Fucus serratus malepolypeptideF-serratus_M_contig1450 117808..120832 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1450.3206.1

>prot_F-serratus_M_contig1450.3206.1 ID=prot_F-serratus_M_contig1450.3206.1|Name=mRNA_F-serratus_M_contig1450.3206.1|organism=Fucus serratus male|type=polypeptide|length=283bp
MERGRPLKGKGGGKRGKGKNHSGGGGGDGGASGRRPKIQSSNRSRISHHG
RFGAREMIERERDKGTKVETSLSVRLRMWDFEQCDVKRCTGRKLCRLGLV
KEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPF
HQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSV
MDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERCEEEASSRRE
GASLEDMMPPSYSDEDESGSDSNGDDARDLAEN
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mRNA from alignment at F-serratus_M_contig1450:117808..120832+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1450.3206.1 ID=mRNA_F-serratus_M_contig1450.3206.1|Name=mRNA_F-serratus_M_contig1450.3206.1|organism=Fucus serratus male|type=mRNA|length=3025bp|location=Sequence derived from alignment at F-serratus_M_contig1450:117808..120832+ (Fucus serratus male)
ATGGAACGGGGTCGACCGCTGAAGGGTAAAGGCGGAGGGAAGAGAGGAAA GGGGAAGAATCATTCTGGTGGGGGTGGCGGTGATGGTGGTGCAAGCGGAA GGAGACCCAAGATCCAGAGTAGCAACCGCTCTCGCATCTCTCATCATGGA AGGTTCGGAGCGCGCGAGATGATCGAACGCGAAAGGGAGTGGAGCGGGGG CGAGACAGGGAGAACTGCCGGAACGGTCGACGGGAGCAAAGGAACTAAGG TTGAGACTTCACTTTCGGTCCGCCTTCGGATGTGGGACTTCGAGCAGTGC GACGTGAAACGCTGCACTGGTCGCAAGCTCTGCCGACTCGGTGAGACAGC ACCCGTGGCTCTTGCAATTATTTACTTATTATATGTAATTTAATCGGAAC TTATTTGTGCCATCATAAAGCTGTCGTCCCCTTTGTGGTTATTGATTGCG CAGCTTCACGGCGCTGTTCAAAGGTAGATAGATCCCCGTTAAAGTGAGAT AGATCCCCGTCCGTTCTCAAGGTCACCGTGTAGCATTATCTCCCGAAATG GATACTTGTAGTCTATGTATCCTCTGATGTACAGCTATTAATCGTCTGTA TCTTTTTTTATTAATGGTTTGAACTTGATGACTAGTATTTGACAGCTGTA CagtAGTACACGAACAGTCAACACTCTGACGACCCTCGACCTCATGATCC GTGGTGATATCGTACGAGAACTTCACCCCCGCACTAATTTGCTTTCGTCG AATCAACAGCGATCCATAATAATTACAGTACTACAGACAGTTGTACTTTA CTTTTCTGATTGCACCTCTCGCGGATGGACAACCTTCGTACAACAGTAAT ACTAGTCATAACTCACACACCGTCGCCCCTCACCAGCCCCATACTTGTAC CTGTCTCGCCAATTTGTCGATCGCGCCTCGGCCACAAACGCCCAGGGCTC GTGAAGGAGATGGAGCTCGGCGCGCCGTTTTCGGGACTGGTTCTCAGCCC CAACGGTAGTTCTACCGTATCGCCCGCGGACAAGGTAAAGTACACTTACC TACGGCGAGCGTGCCTTGGGCTGCGCTCGGGACCTTCCGTGACACCCAAA AGGCGGTCTACAGTACCCCGTTCGTCTCAGCAAACGACACGACAAGATCC CTTGTGGCGACCACGGGTTCGGGCAAGAAAATTAACAGATGGCAACGAAC TGTGTGTGTCTGCGCGTGTGTGTGTGCATCGAGCTCGACCTCTGGGAGGA GGATCACGAGGCAATCTGGAACCGTGGACAACACTAGAGAATAGTATTTT GTGGCAGAGGAGGACTGCTCCTGCACTACGAGTGCACCCTCGGCGCCTTA TGTTCGCCACCCGCGGAGACGGCACTCACACCCTTTCGTCTCTCTCATCA GCGTGCTTAGGGACCGTTGTAATCACTGTCGATCCTGCGTCACCCCGACT TGTGCCCTTACATCTCGGCGGCAGGAGATCATCGAGACGCTGGGCATGTC GGTGATAGATTGCTCCTGGGCAAGATTGGACGAAATCCCTTTCCACCAGG TCAGTACGAGAATCGCCCCCCGGCCTCACCCCCTCTTTTCTCAGTCGCGG CATGGTACAAATCTTGCATCACAAATCGCGCGCAGGGCGTGCCATCGTGT CTGAGAACACGGCGCCCCTCCCTTCCCTCCTTTGTCGCAGCCGCGGAGCG ATCGTTCCGAGCGAAAGCCAGATCGCATCCGTCATACAAGCAGACGGAGA GTCGTTTTCACGCGGGCATCAAGAAAGGAAGAGAGGGAACTATTTTTCCC CTTGGGTATAGACAGTGCCCTCTAGTGCTGCAGTGGTCTCTTGTGTCTTT GTGTGGCTCCTTGGTTGCACCGATCTATGCCGCTGAACAGTTGCACGGCA GAGCGGGCTACTGTATGAATGCGTACTCACCAGAGTTCTTCCAGAGCATC GTGTTCTCTCCCTCTCCCTTCGCCGAAAGTAGATGTCTTTGCACAGATGA AGTGCGCAGACAGTCCCTCTGGAACCGCACCATGAAAAACTTTTGCTTTA CTGTGCCCGTCAATCCAACACACATACCTTTCAAATTACGCCCCACCCCT CCCCCACACTCCACCCCCTCCAACGCATCATAGCCTGTCCGGCGCGTGTC AATCCCTTGGTGTGGTACGATGCCATGACGTCAGATGCGACGTGGTCACC ACCGGCTTCTACCCTTCCTCGTGGCGGCCAATCCTGTAAACTACGGGCGG CCGATGAAGCTCTCCTGCGCCGAGGCCATCGCGGCGACACTTTACATTGT CGGCCATCAGGTGTGCGCTCGAGCCTTTTTTTTTATCGCTAAATCTCCCG ATCGGTTGCCGGGCTATTATAACGCACGCAAGTCGCCGCATTCTCTCTAA TTATCCGTACTTATTCGCTTGCATACAGAATAGTATCCCCCCCCCCCCAT CCGCCGCCCCCCAAAGGACGAGGCCGTGTCGGTGATGGACGAGTTCGGGT GGGGCGCGGAATTCTTGAGGGTAAACGCTGAAGTTCTGGACGCCTACGCG GCGTGCACCGACGGGGCCGAGGTTGTGAAGGCACAGGTAAAAAATGCTTT GTACTGGATACGGGTTCCATTGCTAACGCCGTTTGAGGTGTCTCCCGCTG GCGCCGCATCCGTGTTACGGTAACTGGCGTCATTAGGGGTTGCGACCACT GGCGTCATTAAGGATTGCGATCACTGGCGAATTCGGCATATTCTCGACCT TCAAGGGGGGAGCGGGGTAAGGTCTTATAAAGGACACATATTGTCAGTGT TTCCTATCGCGGACAATGTCCGCGCGCACGCCGCTGTCATAAAGTGTATG CGTGTGTGCATTTATCGCGGTTTTCCAGACGGAGTATTTGGAGCGTTGTG AAGAAGAGGCGTCTTCGAGGCGGGAGGGCGCGTCTCTGGAAGACATGATG CCCCCCTCGTACTCCGACGAAGACGAAAGCGGCAGCGACTCGAACGGCGA CGATGCTCGGGACCTCGCCGAGAAT
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Coding sequence (CDS) from alignment at F-serratus_M_contig1450:117808..120832+

>mRNA_F-serratus_M_contig1450.3206.1 ID=mRNA_F-serratus_M_contig1450.3206.1|Name=mRNA_F-serratus_M_contig1450.3206.1|organism=Fucus serratus male|type=CDS|length=1698bp|location=Sequence derived from alignment at F-serratus_M_contig1450:117808..120832+ (Fucus serratus male)
ATGGAACGGGGTCGACCGCTGAAGGGTAAAGGCGGAGGGAAGAGAGGAAA
GGGGAAGAATCATTCTGGTGGGGGTGGCGGTGATGGTGGTGCAAGCGGAA
GGAGACCCAAGATCCAGAGTAGCAACCGCTCTCGCATCTCTCATCATGGA
AGGTTCGGAGCGCGCGAGATGATCGAACGCGAAAGGGAATGGAACGGGGT
CGACCGCTGAAGGGTAAAGGCGGAGGGAAGAGAGGAAAGGGGAAGAATCA
TTCTGGTGGGGGTGGCGGTGATGGTGGTGCAAGCGGAAGGAGACCCAAGA
TCCAGAGTAGCAACCGCTCTCGCATCTCTCATCATGGAAGGTTCGGAGCG
CGCGAGATGATCGAACGCGAAAGGGACAAAGGAACTAAGGTTGAGACTTC
ACTTTCGGTCCGCCTTCGGATGTGGGACTTCGAGCAGTGCGACGTGAAAC
GCTGCACTGGTCGCAAGCTCTGCCGACTCGCAAAGGAACTAAGGTTGAGA
CTTCACTTTCGGTCCGCCTTCGGATGTGGGACTTCGAGCAGTGCGACGTG
AAACGCTGCACTGGTCGCAAGCTCTGCCGACTCGGGCTCGTGAAGGAGAT
GGAGCTCGGCGCGCCGTTTTCGGGACTGGTTCTCAGCCCCAACGGTAGTT
CTACCGTATCGCCCGCGGACAAGGGCTCGTGAAGGAGATGGAGCTCGGCG
CGCCGTTTTCGGGACTGGTTCTCAGCCCCAACGGTAGTTCTACCGTATCG
CCCGCGGACAAGGAGATCATCGAGACGCTGGGCATGTCGGTGATAGATTG
CTCCTGGGCAAGATTGGACGAAATCCCTTTCCACCAGGAGATCATCGAGA
CGCTGGGCATGTCGGTGATAGATTGCTCCTGGGCAAGATTGGACGAAATC
CCTTTCCACCAGATGCGACGTGGTCACCACCGGCTTCTACCCTTCCTCGT
GGCGGCCAATCCTGTAAACTACGGGCGGCCGATGAAGCTCTCCTGCGCCG
AGGCCATCGCGGCGACACTTTACATTGTCGGCCATCAGATGCGACGTGGT
CACCACCGGCTTCTACCCTTCCTCGTGGCGGCCAATCCTGTAAACTACGG
GCGGCCGATGAAGCTCTCCTGCGCCGAGGCCATCGCGGCGACACTTTACA
TTGTCGGCCATCAGGACGAGGCCGTGTCGGTGATGGACGAGTTCGGGTGG
GGCGCGGAATTCTTGAGGGTAAACGCTGAAGTTCTGGACGCCTACGCGGC
GTGCACCGACGGGGCCGAGGTTGTGAAGGCACAGGACGAGGCCGTGTCGG
TGATGGACGAGTTCGGGTGGGGCGCGGAATTCTTGAGGGTAAACGCTGAA
GTTCTGGACGCCTACGCGGCGTGCACCGACGGGGCCGAGGTTGTGAAGGC
ACAGACGGAGTATTTGGAGCGTTGTGAAGAAGAGGCGTCTTCGAGGCGGG
AGGGCGCGTCTCTGGAAGACATGATGCCCCCCTCGTACTCCGACGAAGAC
GAAAGCGGCAGCGACTCGAACGGCGACGATGCTCGGGACCTCGCCGAGAA
TACGGAGTATTTGGAGCGTTGTGAAGAAGAGGCGTCTTCGAGGCGGGAGG
GCGCGTCTCTGGAAGACATGATGCCCCCCTCGTACTCCGACGAAGACGAA
AGCGGCAGCGACTCGAACGGCGACGATGCTCGGGACCTCGCCGAGAAT
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