mRNA_F-serratus_M_contig1450.3206.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Match: D7G294_ECTSI (18S rRNA aminocarboxypropyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G294_ECTSI) HSP 1 Score: 371 bits (953), Expect = 3.380e-126 Identity = 178/216 (82.41%), Postives = 199/216 (92.13%), Query Frame = 1
Query: 160 AREMIERERDKGTKVETSLSVRLRMWDFEQCDVKRCTGRKLCRLGLVKEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSVMDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERCEEEASSRREGASLEDMMPPSYSDEDESG 807
AREMI+RERD+ ++ S++V LRMWDFEQCDVK+CTGRKLCRLGLV+EMELGAPFSGLVLSPNG TVSPAD+E++ETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYG+PMKL+CAEAIAATLYIVGHQDEAV VMD+FGWGAEFLRVN +VL+ YAAC DGAEVVKAQ +L RCEEEA+SRR+ S+EDMMPPSYSDE+E G
Sbjct: 57 AREMIDRERDESGELAQSITVSLRMWDFEQCDVKKCTGRKLCRLGLVREMELGAPFSGLVLSPNGELTVSPADREVVETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGKPMKLTCAEAIAATLYIVGHQDEAVKVMDQFGWGAEFLRVNEDVLETYAACADGAEVVKAQAAFLARCEEEANSRRDAVSMEDMMPPSYSDEEEYG 272
BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Match: A0A835YJ70_9STRA (18S rRNA aminocarboxypropyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ70_9STRA) HSP 1 Score: 305 bits (780), Expect = 6.350e-100 Identity = 150/241 (62.24%), Postives = 181/241 (75.10%), Query Frame = 1
Query: 109 KIQSSNRSRISHHGRFG---AREMIERERDKGTKVETSLSVRLRMWDFEQCDVKRCTGRKLCRLGLVKEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSVMDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERCEEEASSRREGASLEDMMPPSYSDEDESGSDSNG 822
K + RS H G F A E + + L VRLRMWDFEQCD KRCTGR+LCRLG +KEM+LGAPF GLVLSPNG TVSP D+EI++TLG+SVIDCSWARLD++PFHQMRRGHHRLLPFLVAANPVNYG+P KL+CAEA+AATL IVG +++ VMD+FGWG EFL++NA+VLD YAAC+ GAEV+ AQ YL +CE EA++RR +DM+PP+Y DE S+ G
Sbjct: 36 KRSVATRSGGHHAGYFSGGRAAETADEQEGAAAAAAKGLGVRLRMWDFEQCDPKRCTGRRLCRLGFIKEMDLGAPFQGLVLSPNGEKTVSPEDREIVDTLGISVIDCSWARLDDVPFHQMRRGHHRLLPFLVAANPVNYGKPFKLTCAEALAATLVIVGLREQGALVMDQFGWGPEFLKINADVLDRYAACSSGAEVITAQAAYLAQCEAEAAARRRP---DDMLPPAYDSSDEGESEGEG 273
BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Match: G4ZJA7_PHYSP (18S rRNA aminocarboxypropyltransferase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZJA7_PHYSP) HSP 1 Score: 255 bits (652), Expect = 2.650e-80 Identity = 128/196 (65.31%), Postives = 150/196 (76.53%), Query Frame = 1
Query: 211 SLSVRLRMWDFEQCDVKRCTGRKLCRLGLVKEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSVMDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERCEEEASSRREGASLEDMMPPSYSDED 798
+ V LRMWDF+QCD KRCTGRKLCRLG +K M+ GA F GLVLSP G S VSPAD+ I+E G+SVIDCSWA++ E+P+ Q+R G HRLLPFLVAAN VNYGRP KLSCAEAIAATLYIVG +DEAV +MDEF WGAEFL++NA+ L+AYAAC D A+VV AQ YL C+ E R L+ MM PS +D
Sbjct: 41 AFPVTLRMWDFQQCDSKRCTGRKLCRLGYIKSMKPGAHFRGLVLSPAGESIVSPADRGIVEGTGISVIDCSWAKVQELPYKQLRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGLKDEAVQLMDEFSWGAEFLKINADCLEAYAACEDSAQVVAAQEAYLAACQAENEQR-----LQRMMLPSLESDD 231
BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Match: A0A8K1C8Q2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8Q2_PYTOL) HSP 1 Score: 253 bits (647), Expect = 4.490e-79 Identity = 126/199 (63.32%), Postives = 150/199 (75.38%), Query Frame = 1
Query: 148 GRFGAREMIERERDKGTKVETSLSVRLRMWDFEQCDVKRCTGRKLCRLGLVKEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSVMDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERCEEEASSR 744
G RE E E + K S V LRMWDF+QCD KRCTGRK+CRLG VK M+ G PF G+VLSP G VSPAD EI+ +LG+SVIDCSWA++ E+P+ Q+R G+HRLLPFLVAAN VNYGRP KL+CAEAIAATLYIVG +DEAV V++EF WG EFL++N E L+AYAAC A+VV+AQ YL CEEE +R
Sbjct: 35 GAAAPRERGEEETEINFK-RRSFPVTLRMWDFQQCDSKRCTGRKMCRLGYVKSMKPGQPFRGIVLSPAGEQAVSPADLEIVTSLGISVIDCSWAKVQELPYKQLRSGYHRLLPFLVAANSVNYGRPHKLTCAEAIAATLYIVGMKDEAVQVLEEFQWGMEFLKINFECLEAYAACETSADVVEAQNAYLAACEEELRAR 232
BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Match: A0A3M6VVZ0_9STRA (18S rRNA aminocarboxypropyltransferase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VVZ0_9STRA) HSP 1 Score: 252 bits (644), Expect = 1.270e-78 Identity = 127/210 (60.48%), Postives = 152/210 (72.38%), Query Frame = 1
Query: 175 ERERDKGTKVETS--------------LSVRLRMWDFEQCDVKRCTGRKLCRLGLVKEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSVMDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERCEEEASSRREGASL 762
+R R+K T+ TS V LRMWDF+QCD KRCTGRKLCRLG +K M+ GA F GLVLSP G VS AD +++ + G+SVIDCSWA++ E+P+ Q+R G HRLLPFLVAAN VNYGRP KLSCAEAIAATLYIVG QDEA+ VMDEF WGAEFL++NA+ L AYAACT+ AEVV+AQ YL C+ E R++ L
Sbjct: 15 DRRRNKYTEAITSRGDEESETNYRRRAFPVTLRMWDFQQCDAKRCTGRKLCRLGYIKSMKPGAHFRGLVLSPAGEQAVSRADLDLVTSSGISVIDCSWAKVQELPYKQLRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGLQDEAIQVMDEFSWGAEFLKINADCLQAYAACTNSAEVVEAQNAYLAACQTEQKERQQHMDL 224
BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Match: A0A2D4BYV1_PYTIN (18S rRNA aminocarboxypropyltransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BYV1_PYTIN) HSP 1 Score: 249 bits (635), Expect = 2.550e-77 Identity = 124/223 (55.61%), Postives = 158/223 (70.85%), Query Frame = 1
Query: 88 GASGRRPKIQSSNRSRISHHGRFGAREMIERERDKGTKV----ETSLSVRLRMWDFEQCDVKRCTGRKLCRLGLVKEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSVMDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERCEEEASSR 744
GA GR+P+ + + + +ER++G S + LRMWDF+QCD KRCTGRKLCRL VK M+ G PF G+VLSP G +SPAD+EI+ETLG+SVIDCSWA++ E+P+ Q+R G+HRLLPF AN VNYG+P KLSCAEAIAATLYIVG +DEAV +M+EF WG EFL++N + L+AYAAC + A+VV+AQ YL CEEE +R
Sbjct: 19 GAGGRQPRKSRGRDAPV-----------VSQEREEGESEISFKRRSFPITLRMWDFQQCDSKRCTGRKLCRLAYVKSMKPGQPFRGIVLSPAGEQALSPADREIVETLGISVIDCSWAKVQELPYKQLRSGYHRLLPF--HANTVNYGKPYKLSCAEAIAATLYIVGMKDEAVQIMEEFSWGMEFLKINMDCLEAYAACENSAQVVEAQNAYLAACEEEHKAR 228
BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Match: A0A6A3KBB7_9STRA (18S rRNA aminocarboxypropyltransferase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3KBB7_9STRA) HSP 1 Score: 249 bits (635), Expect = 3.120e-77 Identity = 119/178 (66.85%), Postives = 142/178 (79.78%), Query Frame = 1
Query: 211 SLSVRLRMWDFEQCDVKRCTGRKLCRLGLVKEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSVMDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERCEEEASSR 744
+ V LRMWDF+QCD KRCTGRKLCRLG ++ M+ GA F GLVLSP G VSPAD+ I++ G+S IDCSWA++ E+P+ Q+R G HRLLPFLVAAN VNYGRP KLSCAEAIAATLYIVG +DEAV +MDEF WGAEFL++NA+ L+AYAAC + AEVV+AQT YL C+ E R
Sbjct: 41 AFPVTLRMWDFQQCDSKRCTGRKLCRLGYIQSMKPGAHFRGLVLSPAGEQVVSPADRGIVQGSGISAIDCSWAKVQELPYKQVRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGLKDEAVQLMDEFSWGAEFLKINADCLEAYAACENSAEVVEAQTAYLTACQTEHEQR 218
BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Match: D0P2X0_PHYIT (18S rRNA aminocarboxypropyltransferase n=11 Tax=Phytophthora TaxID=4783 RepID=D0P2X0_PHYIT) HSP 1 Score: 246 bits (628), Expect = 6.780e-77 Identity = 118/179 (65.92%), Postives = 141/179 (78.77%), Query Frame = 1
Query: 226 LRMWDFEQCDVKRCTGRKLCRLGLVKEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSVMDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERCEEEASSRREGASL 762
LRMWDF+QCD KRCTGRKLCRLG +K M+ GA F GLVLSP G VSPAD+ I+E G+SVIDCSWA++ E+P+ Q+R G HRLLPFLVAAN VNYGRP KLSCAEAIAATLYIVG + EA +MDEF WGAEFL++NA+ L+AY+ACT+ EVV+AQ YL C+ E R + +L
Sbjct: 3 LRMWDFQQCDSKRCTGRKLCRLGYIKSMKPGAHFRGLVLSPAGEQIVSPADRTIVEGTGISVIDCSWAKVQELPYKQLRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGLKQEATQLMDEFSWGAEFLKINADCLEAYSACTNSTEVVEAQDAYLTACQTEHMERLQRINL 181
BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Match: M4BTS6_HYAAE (18S rRNA aminocarboxypropyltransferase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BTS6_HYAAE) HSP 1 Score: 247 bits (631), Expect = 1.020e-76 Identity = 119/179 (66.48%), Postives = 140/179 (78.21%), Query Frame = 1
Query: 226 LRMWDFEQCDVKRCTGRKLCRLGLVKEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSVMDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERCEEEASSRREGASL 762
LRMWDF+QCD KRCTGRKLCRLG +K M+ G F GLVLSP G VS AD+E++ G+SVIDCSWA++ E+P+ Q+R G HRLLPFLVAAN VNYGRP KLSCAEAIAATLYIVG QDEA VMDEF WGAEFL++NA+ L AYAAC + A+VVKAQ +YL C+ E R++ L
Sbjct: 46 LRMWDFQQCDAKRCTGRKLCRLGYIKSMKPGMHFRGLVLSPAGEQAVSAADRELVMGTGISVIDCSWAKVQELPYKQLRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGCQDEARQVMDEFSWGAEFLKINADCLAAYAACENSAQVVKAQNDYLAACQSEHKERQQQMKL 224
BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Match: A0A7R9UC21_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UC21_9STRA) HSP 1 Score: 243 bits (621), Expect = 1.100e-76 Identity = 114/171 (66.67%), Postives = 137/171 (80.12%), Query Frame = 1
Query: 211 SLSVRLRMWDFEQCDVKRCTGRKLCRLGLVKEMELGAPFSGLVLSPNGSSTVSPADKEIIETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGRPMKLSCAEAIAATLYIVGHQDEAVSVMDEFGWGAEFLRVNAEVLDAYAACTDGAEVVKAQTEYLERC 723
+ V+LRMWDF QCD KRCTGR+L R GL++ M L A F GLVLSP G VSPAD+ +++TLG+SVIDCSW RLD++PF ++R GHHRLLPFLVAANPVNYGRP KLSCAEA+AATL IVGHQ+ A +++D FGWG EFL++NAE+L YAAC EVV+AQ YLE C
Sbjct: 15 NFPVKLRMWDFAQCDAKRCTGRRLERFGLLRNMPLTAKFQGLVLSPLGKLIVSPADRGLVDTLGISVIDCSWNRLDDVPFRRLRSGHHRLLPFLVAANPVNYGRPSKLSCAEALAATLVIVGHQELAETLLDRFGWGREFLKINAELLARYAACESAEEVVQAQDAYLEAC 185 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1450.3206.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1450.3206.1 >prot_F-serratus_M_contig1450.3206.1 ID=prot_F-serratus_M_contig1450.3206.1|Name=mRNA_F-serratus_M_contig1450.3206.1|organism=Fucus serratus male|type=polypeptide|length=283bp MERGRPLKGKGGGKRGKGKNHSGGGGGDGGASGRRPKIQSSNRSRISHHGback to top mRNA from alignment at F-serratus_M_contig1450:117808..120832+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1450.3206.1 ID=mRNA_F-serratus_M_contig1450.3206.1|Name=mRNA_F-serratus_M_contig1450.3206.1|organism=Fucus serratus male|type=mRNA|length=3025bp|location=Sequence derived from alignment at F-serratus_M_contig1450:117808..120832+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1450:117808..120832+ >mRNA_F-serratus_M_contig1450.3206.1 ID=mRNA_F-serratus_M_contig1450.3206.1|Name=mRNA_F-serratus_M_contig1450.3206.1|organism=Fucus serratus male|type=CDS|length=1698bp|location=Sequence derived from alignment at F-serratus_M_contig1450:117808..120832+ (Fucus serratus male)back to top |