prot_F-serratus_M_contig1449.3178.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1449.3178.1
Unique Nameprot_F-serratus_M_contig1449.3178.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length122
Homology
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BLAST of mRNA_F-serratus_M_contig1449.3178.1 vs. uniprot
Match: D8LEW9_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW9_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 4.410e-7
Identity = 37/86 (43.02%), Postives = 48/86 (55.81%), Query Frame = 0 
Query:   46 ENSINQSIQSALRTLFRELSGGEGGGGKVDVERAGITGT----------TSASVEALRVALAKVPGERFALGETEDAAEALETILG 121
            E   +  ++++LR LFRELS  +GG                        TSASVEALR ALA++ G RF  G+ +DAAEA+ETILG
Sbjct: 1612 EKEPSHRVEASLRALFRELSEVDGGXXXXXXXXXXXXXXXXXXXXXXXXTSASVEALRTALAELSGARFGAGKMDDAAEAMETILG 1697
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1449.3178.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LEW9_ECTSI4.410e-743.02USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..121
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1449contigF-serratus_M_contig1449:205375..206039 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1449.3178.1mRNA_F-serratus_M_contig1449.3178.1Fucus serratus malemRNAF-serratus_M_contig1449 203406..206280 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1449.3178.1 ID=prot_F-serratus_M_contig1449.3178.1|Name=mRNA_F-serratus_M_contig1449.3178.1|organism=Fucus serratus male|type=polypeptide|length=122bp
MLLFSSISCTISAFSLYGEYVVRSFLPNGVFYLVTTGWVFDISLCENSIN
QSIQSALRTLFRELSGGEGGGGKVDVERAGITGTTSASVEALRVALAKVP
GERFALGETEDAAEALETILG*
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