prot_F-serratus_M_contig144.3140.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig144.3140.1
Unique Nameprot_F-serratus_M_contig144.3140.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length107
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig144.3140.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 4..27
e-value: 0.009
score: 25.2
coord: 28..51
e-value: 0.0053
score: 26.0
coord: 52..75
e-value: 1.6E-5
score: 34.4
coord: 77..99
e-value: 0.43
score: 19.6
NoneNo IPR availableSMARTSM00364LRR_bac_2coord: 4..23
e-value: 40.0
score: 9.1
coord: 52..71
e-value: 31.0
score: 9.9
coord: 28..47
e-value: 95.0
score: 6.3
NoneNo IPR availablePANTHERPTHR45842FAMILY NOT NAMEDcoord: 1..106
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 1..106
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..106
e-value: 1.2E-30
score: 108.4
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 30..89
e-value: 5.1E-16
score: 58.2
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 30..51
score: 6.441
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 6..27
score: 5.956
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 54..75
score: 7.82
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 78..99
score: 6.026

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig144contigF-serratus_M_contig144:532315..535370 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig144.3140.1mRNA_F-serratus_M_contig144.3140.1Fucus serratus malemRNAF-serratus_M_contig144 532315..535370 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig144.3140.1 ID=prot_F-serratus_M_contig144.3140.1|Name=mRNA_F-serratus_M_contig144.3140.1|organism=Fucus serratus male|type=polypeptide|length=107bp
FADLTALELLSLRRNALTSLPDTLLTGLHNLTYVDFQHNNLEELPERAFT
DLVNLQKLYLNENSLTSLPDDCFSGAYGLQHLYLDWNRLQRLPVGIFGGM
SELKTL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt