prot_F-serratus_M_contig1425.3044.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1425.3044.1
Unique Nameprot_F-serratus_M_contig1425.3044.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length491
Homology
BLAST of mRNA_F-serratus_M_contig1425.3044.1 vs. uniprot
Match: D7FVA4_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVA4_ECTSI)

HSP 1 Score: 299 bits (766), Expect = 8.470e-93
Identity = 211/496 (42.54%), Postives = 281/496 (56.65%), Query Frame = 0
Query:    5 RKGAGLALLTLGLGVWRAWGQVTVETCDDLISSIA--DGATTLELKGDFTCIEEISVDEGVEVSIDGASHTLSIGNDLVYEEGTNA---LIYNKGTLTLTNLTVTVADTSADNKFRAIYNEGDLTVNLCTFSSLNLGADPVDDGGVIYSESAGGTVSIESSEFTSNGCRLQGGAIHAAADEQLTITDCEFSDNEAGTTDDESASGGDVYAADGVTLVVQSSNFRGSAAAYGGAAIHCCGATITGSRFIDAESGSAGNEHYGGAILVGLPDE-GCTQELEMTNSTFSKCSVQETDGAGGSLAVFDTSATLDDITINDSQGSAVLFQSSDADGSHAIKMSSMEFQYNTDPSAAYASNSLEQGSAFILQNTAAED--ESVMMGTFDTVHCYSNDPYECEMVFDLAGVTYNGDIKCQICNMDSERLWVGLDENSI--ADGSGDTEDSSXXXXXXXXXXIVIGLSLALGLTLVVIGALAVWKIRVRKNARRLMEDMGDGDL 490
            RK A LAL  LGL   +A     V TC  LI+++    G  T+EL+G FTC   I+V    +V+I GA +T+++G        T+A   L  N+GTL L  +T     T                     + +       +  GGVIYS+SAG T+SI  S F SN                          NE GT      +GGDVYA   V L V  + F  SAA YGGAAI CCGA I+ + F  A++          A+LV  PD+ GC +EL+++NSTFS C+V  T GAGGS+A+FDTSAT+ D T   S G+AVLF SS   G H + M  ++F  NT P+ AYA+++ EQG+A ++ NT   D   +V MG F+ ++C++N+PYECE V+D + + ++G+ KCQIC+++ ER   G D++ I  ++ S D + SS          IVIGLSLALGLTLVVIGALAVWK RVRKNARRLMEDMG+GDL
Sbjct:    5 RKSAVLALFFLGLAARQA---SAVTTCLALITAVEAISGTGTVELEGGFTCEAYITVAASQDVTISGA-YTITLGAPFAGSTNTDAGGSLFENEGTLKLDGITFATETTDGXXXXXXXXXXXXXXXXXELYPTGIF----LSRGGVIYSDSAG-TISISDSTFKSNLASEXXXXXXXXXXXXXXXXXXXXXXNEVGTGVAADGAGGDVYAGTNVDLTVTGTTFSTSAAEYGGAAIECCGAVISDTVFTGADTXXXXXXXXX-ALLVNRPDQDGCPRELDLSNSTFSGCTVGSTTGAGGSVAIFDTSATITDCTFESSVGTAVLFSSSSDSGEHQLLMDYVQFNLNTFPAEAYATDT-EQGAAIVVTNTGVADGETTVTMGEFNDMYCFANEPYECEFVYDQSDIVHSGEFKCQICDIEGERQQSGTDDDLIDASERSIDGDSSSDNQG------IVIGLSLALGLTLVVIGALAVWKFRVRKNARRLMEDMGEGDL 483          
BLAST of mRNA_F-serratus_M_contig1425.3044.1 vs. uniprot
Match: D7FV99_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV99_ECTSI)

HSP 1 Score: 237 bits (604), Expect = 1.580e-68
Identity = 176/466 (37.77%), Postives = 241/466 (51.72%), Query Frame = 0
Query:    5 RKGAGLALLTLGLGVWRAWGQVTVETCDDLISSIA--DGATTLELKGDFTCIEEISVDEGVEVSIDGASHTLSIGNDLVYEEGTNA---LIYNKGTLTLTNLTVTVADTSADNKFRAIYNEGDLTVNLCTFSSLNLGADPVDDGGVIYSESAGGTVSIESSEFTSNGCRLQGGAIHAAADEQLTITDCEFSDNEAGTTDDESASGGDVYAADGVTLVVQSSNFRGSAAAYGGAAIHCCGATITGSRFIDAESGSAGNEHYGGAILVGLPDEG-CTQELEMTNSTFSKCSVQETDGAGGSLAVFDTSATLDDITINDSQGSAVLFQSSDADGSHAIKMSSMEFQYNTDPSAAYASNSLEQGSAFILQNTAAED--ESVMMGTFDTVHCYSNDPYECEMVFDLAGVTYNGDIKCQICNMDSERLWVGLDENSIADGSGDTEDSSXXXXXXXXXXIVIGLSLALGLTLV 462
            RK AGLAL  LGL   +A     V TC  LI+++    G  T EL+G FTC   I+V    +V+I GA +T+++G        T+A   L  N+GTL L  +T     T                           GA  +  GGV+YS+SAG T+SI  S FTSN                          NE GT  D   +GGDVY    V L V  + F  S A YGGAAI CCGA I+   F               A+LV  PD+  C ++L++++STFS C+V  T GAGGS+A+FDTSAT+ D T   S G+AVLF SS   G H + M+ ++F  NT P+ AY +++ EQG+A ++ NT   D   +V MG FD ++C++N+PYECE V+D + + +NG+ KCQIC++D  +   G D     D +G  + SS          I+IGLS AL L ++
Sbjct:    5 RKSAGLALFFLGLAARQA---SAVTTCPALITAVEAISGTGTAELEGSFTCDTHITVAASQDVTISGA-YTITLGPLFAGSTDTDAGGSLFMNEGTLKLDGITFA---TXXXXXXXXXXXXXXXXXXXXXXELYPTGAF-LSRGGVVYSDSAG-TISISDSTFTSNLASEXXXXXXXXXXXXXXXXXXXXRGNEVGTGVDADGAGGDVYVGTNVELTVTGTTFSTSVAEYGGAAIECCGAVISNCTFXXXXXXXXXXXXXX-ALLVNRPDQDPCPRDLDLSDSTFSGCTVVSTTGAGGSVAIFDTSATITDCTFESSVGTAVLFSSSSDSGEHQLLMNYVQFNLNTLPAEAYVTDT-EQGAAIVVTNTGVADGETTVTMGEFDDIYCFANEPYECEFVYDQSDIVHNGEFKCQICDIDGVQQVSGTD----GDLTGSIDQSSSSNSWDSKDYIIIGLSAALALCII 455          
BLAST of mRNA_F-serratus_M_contig1425.3044.1 vs. uniprot
Match: D7FVA0_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVA0_ECTSI)

HSP 1 Score: 215 bits (547), Expect = 9.060e-61
Identity = 154/404 (38.12%), Postives = 226/404 (55.94%), Query Frame = 0
Query:   44 TLELKGDFTCIEEISVDEGVEVSIDGASHTLSIGNDLVYEEGTNA---LIYNKGTLTLTNLTVTVADTSADNKFRAIYNEGDLTVNLCTFSSL--NLGADPVDDGGVIYSESAGGTVSIESSEFTSNGCRLQGGAIHAAADEQLTITDCEFSDNEAGTTDDESASGGDVYAADGVTLVVQSSNFRGSAAAYGGAAIHCCGATITGSRFIDAESGSAGNEHYGGAILVGLPDE-GCTQELEMTNSTFSKCSVQETDGAGGSLAVFDTSATLDDITINDSQGSAVLFQSSDADGSHAIKMSSMEFQYNTDPSAAYASNSLEQGSAFILQNTAAED--ESVMMGTFDTVHCYSNDPYECEMVFDLAGVTYNGDIKCQICNMDSERLWV-GLDENSIADGSGDTEDSS 438
            T+EL+  FTC   I+VD   +V+I GA +T+++G        T+A   L  N+GTL L  +T     T  +   RA++N G           L  + G + +  GGVIYS+S G  ++I +S F SN    +GGA++A   E LTITD  F+ NE GT  +E  +GGDVYA   V L V  + F  SAA Y                                 +LV  PD+  C++EL+++++ FS CSV  T GAGGS+A+FDTSAT+ D T   S G+AVLF SS   G H + M  ++F  NT P+ AYA+++ EQG+A ++ NT  E+   +V+MG F+ ++C+ NDPYECE V+D + + ++G+  CQ+C +D  R  V G D++S+ +G G T  S+
Sbjct:    6 TVELESGFTCDAHITVDASQDVTISGA-YTITLGALFAGSTATDAGGSLFVNEGTLELDGITFATEATDGN---RAVWN-GXXXXXXXXXXELFPSGGGEFLARGGVIYSDSDG-EIAISASTFKSNIASERGGAVYAIGSETLTITDSLFTVNEVGTGVEEGGAGGDVYAGINVELTVTGTTFSTSAAEYXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXLLVNRPDQDACSRELDLSDTIFSGCSVVSTTGAGGSVAIFDTSATITDCTFESSVGTAVLFSSSSDSGEHQLLMDYVQFNLNTLPAEAYATDT-EQGAAIVVTNTGVEEGNTTVVMGEFNDMYCFGNDPYECEFVYDQSDIVHSGEFNCQLCVIDGVRQEVSGTDDDSV-EGIGQTSSST 400          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1425.3044.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FVA4_ECTSI8.470e-9342.54Probable extracellular nuclease n=1 Tax=Ectocarpus... [more]
D7FV99_ECTSI1.580e-6837.77Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7FVA0_ECTSI9.060e-6138.12Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 471..490
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 449..470
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..448
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.848
NoneNo IPR availableTMHMMTMhelixcoord: 448..470
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 35..354

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1425contigF-serratus_M_contig1425:202360..211882 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1425.3044.1mRNA_F-serratus_M_contig1425.3044.1Fucus serratus malemRNAF-serratus_M_contig1425 202093..213275 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1425.3044.1 ID=prot_F-serratus_M_contig1425.3044.1|Name=mRNA_F-serratus_M_contig1425.3044.1|organism=Fucus serratus male|type=polypeptide|length=491bp
MTSIRKGAGLALLTLGLGVWRAWGQVTVETCDDLISSIADGATTLELKGD
FTCIEEISVDEGVEVSIDGASHTLSIGNDLVYEEGTNALIYNKGTLTLTN
LTVTVADTSADNKFRAIYNEGDLTVNLCTFSSLNLGADPVDDGGVIYSES
AGGTVSIESSEFTSNGCRLQGGAIHAAADEQLTITDCEFSDNEAGTTDDE
SASGGDVYAADGVTLVVQSSNFRGSAAAYGGAAIHCCGATITGSRFIDAE
SGSAGNEHYGGAILVGLPDEGCTQELEMTNSTFSKCSVQETDGAGGSLAV
FDTSATLDDITINDSQGSAVLFQSSDADGSHAIKMSSMEFQYNTDPSAAY
ASNSLEQGSAFILQNTAAEDESVMMGTFDTVHCYSNDPYECEMVFDLAGV
TYNGDIKCQICNMDSERLWVGLDENSIADGSGDTEDSSSSGSSDSNEGIV
IGLSLALGLTLVVIGALAVWKIRVRKNARRLMEDMGDGDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence