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Homology
BLAST of mRNA_F-serratus_M_contig1425.3044.1 vs. uniprot
Match: D7FVA4_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVA4_ECTSI) HSP 1 Score: 298 bits (763), Expect = 5.110e-87 Identity = 211/496 (42.54%), Postives = 281/496 (56.65%), Query Frame = 1
Query: 280 RKGAGLALLTLGLGVWRAWGQVTVETCDDLISSIA--DGATTLELKGDFTCIEEISVDEGVEVSIDGASHTLSIGNDLVYEEGTNA---LIYNKGTLTLTNLTVTVADTSADNKFRAIYNEGDLTVNLCTFSSLNLGADPVDDGGVIYSESAGGTVSIESSEFTSNGCRLQGGAIHAAADEQLTITDCEFSDNEAGTTDDESASGGDVYAADGVTLVVQSSNFRGSAAAYGGAAIHCCGATITGSRFIDAESGSAGNEHYGGAILVGLPDE-GCTQELEMTNSTFSKCSVQETDGAGGSLAVFDTSATLDDITINDSQGSAVLFQSSDADGSHAIKMSSMEFQYNTDPSAAYASNSLEQGSAFILQNTAAED--ESVMMGTFDTVHCYSNDPYECEMVFDLAGVTYNGDIKCQICNMDSERLWVGLDENSI--ADGSGDTEDSSXXXXXXXXXXIVIGLSLALGLTLVVIGALAVWKIRVRKNARRLMEDMGDGDL 1737
RK A LAL LGL +A V TC LI+++ G T+EL+G FTC I+V +V+I GA +T+++G T+A L N+GTL L +T T + + + GGVIYS+SAG T+SI S F SN NE GT +GGDVYA V L V + F SAA YGGAAI CCGA I+ + F A++ A+LV PD+ GC +EL+++NSTFS C+V T GAGGS+A+FDTSAT+ D T S G+AVLF SS G H + M ++F NT P+ AYA+++ EQG+A ++ NT D +V MG F+ ++C++N+PYECE V+D + + ++G+ KCQIC+++ ER G D++ I ++ S D + SS IVIGLSLALGLTLVVIGALAVWK RVRKNARRLMEDMG+GDL
Sbjct: 5 RKSAVLALFFLGLAARQA---SAVTTCLALITAVEAISGTGTVELEGGFTCEAYITVAASQDVTISGA-YTITLGAPFAGSTNTDAGGSLFENEGTLKLDGITFATETTDGXXXXXXXXXXXXXXXXXELYPTGIF----LSRGGVIYSDSAG-TISISDSTFKSNLASEXXXXXXXXXXXXXXXXXXXXXXNEVGTGVAADGAGGDVYAGTNVDLTVTGTTFSTSAAEYGGAAIECCGAVISDTVFTGADTXXXXXXXXX-ALLVNRPDQDGCPRELDLSNSTFSGCTVGSTTGAGGSVAIFDTSATITDCTFESSVGTAVLFSSSSDSGEHQLLMDYVQFNLNTFPAEAYATDT-EQGAAIVVTNTGVADGETTVTMGEFNDMYCFANEPYECEFVYDQSDIVHSGEFKCQICDIEGERQQSGTDDDLIDASERSIDGDSSSDNQG------IVIGLSLALGLTLVVIGALAVWKFRVRKNARRLMEDMGEGDL 483
BLAST of mRNA_F-serratus_M_contig1425.3044.1 vs. uniprot
Match: D7FV99_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV99_ECTSI) HSP 1 Score: 236 bits (603), Expect = 2.310e-64 Identity = 176/466 (37.77%), Postives = 241/466 (51.72%), Query Frame = 1
Query: 280 RKGAGLALLTLGLGVWRAWGQVTVETCDDLISSIA--DGATTLELKGDFTCIEEISVDEGVEVSIDGASHTLSIGNDLVYEEGTNA---LIYNKGTLTLTNLTVTVADTSADNKFRAIYNEGDLTVNLCTFSSLNLGADPVDDGGVIYSESAGGTVSIESSEFTSNGCRLQGGAIHAAADEQLTITDCEFSDNEAGTTDDESASGGDVYAADGVTLVVQSSNFRGSAAAYGGAAIHCCGATITGSRFIDAESGSAGNEHYGGAILVGLPDEG-CTQELEMTNSTFSKCSVQETDGAGGSLAVFDTSATLDDITINDSQGSAVLFQSSDADGSHAIKMSSMEFQYNTDPSAAYASNSLEQGSAFILQNTAAED--ESVMMGTFDTVHCYSNDPYECEMVFDLAGVTYNGDIKCQICNMDSERLWVGLDENSIADGSGDTEDSSXXXXXXXXXXIVIGLSLALGLTLV 1653
RK AGLAL LGL +A V TC LI+++ G T EL+G FTC I+V +V+I GA +T+++G T+A L N+GTL L +T T GA + GGV+YS+SAG T+SI S FTSN NE GT D +GGDVY V L V + F S A YGGAAI CCGA I+ F A+LV PD+ C ++L++++STFS C+V T GAGGS+A+FDTSAT+ D T S G+AVLF SS G H + M+ ++F NT P+ AY +++ EQG+A ++ NT D +V MG FD ++C++N+PYECE V+D + + +NG+ KCQIC++D + G D D +G + SS I+IGLS AL L ++
Sbjct: 5 RKSAGLALFFLGLAARQA---SAVTTCPALITAVEAISGTGTAELEGSFTCDTHITVAASQDVTISGA-YTITLGPLFAGSTDTDAGGSLFMNEGTLKLDGITFA---TXXXXXXXXXXXXXXXXXXXXXXELYPTGAF-LSRGGVVYSDSAG-TISISDSTFTSNLASEXXXXXXXXXXXXXXXXXXXXRGNEVGTGVDADGAGGDVYVGTNVELTVTGTTFSTSVAEYGGAAIECCGAVISNCTFXXXXXXXXXXXXXX-ALLVNRPDQDPCPRDLDLSDSTFSGCTVVSTTGAGGSVAIFDTSATITDCTFESSVGTAVLFSSSSDSGEHQLLMNYVQFNLNTLPAEAYVTDT-EQGAAIVVTNTGVADGETTVTMGEFDDIYCFANEPYECEFVYDQSDIVHNGEFKCQICDIDGVQQVSGTD----GDLTGSIDQSSSSNSWDSKDYIIIGLSAALALCII 455
BLAST of mRNA_F-serratus_M_contig1425.3044.1 vs. uniprot
Match: D7FVA0_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVA0_ECTSI) HSP 1 Score: 215 bits (547), Expect = 2.450e-57 Identity = 154/404 (38.12%), Postives = 226/404 (55.94%), Query Frame = 1
Query: 397 TLELKGDFTCIEEISVDEGVEVSIDGASHTLSIGNDLVYEEGTNA---LIYNKGTLTLTNLTVTVADTSADNKFRAIYNEGDLTVNLCTFSSL--NLGADPVDDGGVIYSESAGGTVSIESSEFTSNGCRLQGGAIHAAADEQLTITDCEFSDNEAGTTDDESASGGDVYAADGVTLVVQSSNFRGSAAAYGGAAIHCCGATITGSRFIDAESGSAGNEHYGGAILVGLPDE-GCTQELEMTNSTFSKCSVQETDGAGGSLAVFDTSATLDDITINDSQGSAVLFQSSDADGSHAIKMSSMEFQYNTDPSAAYASNSLEQGSAFILQNTAAED--ESVMMGTFDTVHCYSNDPYECEMVFDLAGVTYNGDIKCQICNMDSERLWV-GLDENSIADGSGDTEDSS 1581
T+EL+ FTC I+VD +V+I GA +T+++G T+A L N+GTL L +T T + RA++N G L + G + + GGVIYS+S G ++I +S F SN +GGA++A E LTITD F+ NE GT +E +GGDVYA V L V + F SAA Y +LV PD+ C++EL+++++ FS CSV T GAGGS+A+FDTSAT+ D T S G+AVLF SS G H + M ++F NT P+ AYA+++ EQG+A ++ NT E+ +V+MG F+ ++C+ NDPYECE V+D + + ++G+ CQ+C +D R V G D++S+ +G G T S+
Sbjct: 6 TVELESGFTCDAHITVDASQDVTISGA-YTITLGALFAGSTATDAGGSLFVNEGTLELDGITFATEATDGN---RAVWN-GXXXXXXXXXXELFPSGGGEFLARGGVIYSDSDG-EIAISASTFKSNIASERGGAVYAIGSETLTITDSLFTVNEVGTGVEEGGAGGDVYAGINVELTVTGTTFSTSAAEYXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXLLVNRPDQDACSRELDLSDTIFSGCSVVSTTGAGGSVAIFDTSATITDCTFESSVGTAVLFSSSSDSGEHQLLMDYVQFNLNTLPAEAYATDT-EQGAAIVVTNTGVEEGNTTVVMGEFNDMYCFGNDPYECEFVYDQSDIVHSGEFNCQLCVIDGVRQEVSGTDDDSV-EGIGQTSSST 400
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Hectar predicted targeting category | signal peptide |
| Exons | 6 |
| Model size | 3133 |
| Cds size | 1473 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622929409.1371112-UTR-F-serratus_M_contig1425:202092..202359 | 1622929409.1371112-UTR-F-serratus_M_contig1425:202092..202359 | Fucus serratus male | UTR | F-serratus_M_contig1425 202093..202359 + |
| 1690962838.4571323-UTR-F-serratus_M_contig1425:202092..202359 | 1690962838.4571323-UTR-F-serratus_M_contig1425:202092..202359 | Fucus serratus male | UTR | F-serratus_M_contig1425 202093..202359 + |
| 1622929409.233207-UTR-F-serratus_M_contig1425:211882..213275 | 1622929409.233207-UTR-F-serratus_M_contig1425:211882..213275 | Fucus serratus male | UTR | F-serratus_M_contig1425 211883..213275 + |
| 1690962838.5448596-UTR-F-serratus_M_contig1425:211882..213275 | 1690962838.5448596-UTR-F-serratus_M_contig1425:211882..213275 | Fucus serratus male | UTR | F-serratus_M_contig1425 211883..213275 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622929409.150204-CDS-F-serratus_M_contig1425:202359..202794 | 1622929409.150204-CDS-F-serratus_M_contig1425:202359..202794 | Fucus serratus male | CDS | F-serratus_M_contig1425 202360..202794 + |
| 1690962838.46977-CDS-F-serratus_M_contig1425:202359..202794 | 1690962838.46977-CDS-F-serratus_M_contig1425:202359..202794 | Fucus serratus male | CDS | F-serratus_M_contig1425 202360..202794 + |
| 1622929409.1612663-CDS-F-serratus_M_contig1425:209444..209777 | 1622929409.1612663-CDS-F-serratus_M_contig1425:209444..209777 | Fucus serratus male | CDS | F-serratus_M_contig1425 209445..209777 + |
| 1690962838.4872034-CDS-F-serratus_M_contig1425:209444..209777 | 1690962838.4872034-CDS-F-serratus_M_contig1425:209444..209777 | Fucus serratus male | CDS | F-serratus_M_contig1425 209445..209777 + |
| 1622929409.1744041-CDS-F-serratus_M_contig1425:210162..210396 | 1622929409.1744041-CDS-F-serratus_M_contig1425:210162..210396 | Fucus serratus male | CDS | F-serratus_M_contig1425 210163..210396 + |
| 1690962838.5013475-CDS-F-serratus_M_contig1425:210162..210396 | 1690962838.5013475-CDS-F-serratus_M_contig1425:210162..210396 | Fucus serratus male | CDS | F-serratus_M_contig1425 210163..210396 + |
| 1622929409.192066-CDS-F-serratus_M_contig1425:210600..210705 | 1622929409.192066-CDS-F-serratus_M_contig1425:210600..210705 | Fucus serratus male | CDS | F-serratus_M_contig1425 210601..210705 + |
| 1690962838.5116458-CDS-F-serratus_M_contig1425:210600..210705 | 1690962838.5116458-CDS-F-serratus_M_contig1425:210600..210705 | Fucus serratus male | CDS | F-serratus_M_contig1425 210601..210705 + |
| 1622929409.2065744-CDS-F-serratus_M_contig1425:211068..211244 | 1622929409.2065744-CDS-F-serratus_M_contig1425:211068..211244 | Fucus serratus male | CDS | F-serratus_M_contig1425 211069..211244 + |
| 1690962838.5226204-CDS-F-serratus_M_contig1425:211068..211244 | 1690962838.5226204-CDS-F-serratus_M_contig1425:211068..211244 | Fucus serratus male | CDS | F-serratus_M_contig1425 211069..211244 + |
| 1622929409.2219794-CDS-F-serratus_M_contig1425:211692..211882 | 1622929409.2219794-CDS-F-serratus_M_contig1425:211692..211882 | Fucus serratus male | CDS | F-serratus_M_contig1425 211693..211882 + |
| 1690962838.5320492-CDS-F-serratus_M_contig1425:211692..211882 | 1690962838.5320492-CDS-F-serratus_M_contig1425:211692..211882 | Fucus serratus male | CDS | F-serratus_M_contig1425 211693..211882 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1425.3044.1 >prot_F-serratus_M_contig1425.3044.1 ID=prot_F-serratus_M_contig1425.3044.1|Name=mRNA_F-serratus_M_contig1425.3044.1|organism=Fucus serratus male|type=polypeptide|length=491bp
MTSIRKGAGLALLTLGLGVWRAWGQVTVETCDDLISSIADGATTLELKGD FTCIEEISVDEGVEVSIDGASHTLSIGNDLVYEEGTNALIYNKGTLTLTN LTVTVADTSADNKFRAIYNEGDLTVNLCTFSSLNLGADPVDDGGVIYSES AGGTVSIESSEFTSNGCRLQGGAIHAAADEQLTITDCEFSDNEAGTTDDE SASGGDVYAADGVTLVVQSSNFRGSAAAYGGAAIHCCGATITGSRFIDAE SGSAGNEHYGGAILVGLPDEGCTQELEMTNSTFSKCSVQETDGAGGSLAV FDTSATLDDITINDSQGSAVLFQSSDADGSHAIKMSSMEFQYNTDPSAAY ASNSLEQGSAFILQNTAAEDESVMMGTFDTVHCYSNDPYECEMVFDLAGV TYNGDIKCQICNMDSERLWVGLDENSIADGSGDTEDSSSSGSSDSNEGIV IGLSLALGLTLVVIGALAVWKIRVRKNARRLMEDMGDGDL* back to topmRNA from alignment at F-serratus_M_contig1425:202093..213275+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig1425.3044.1 ID=mRNA_F-serratus_M_contig1425.3044.1|Name=mRNA_F-serratus_M_contig1425.3044.1|organism=Fucus serratus male|type=mRNA|length=11183bp|location=Sequence derived from alignment at F-serratus_M_contig1425:202093..213275+ (Fucus serratus male) CAAGACTTCGTCAACATTCTAGCATCAGCAGTAAGCCCCGCTCTCCCAAG
CATCTGACACTCAGATCTACACCAACGATCTGGAACAACTTTCGAGGATA
ACTTGCGTCCTGACGCTCTGAACCAGGGAGAGTCTTCAGTTAGTCGCAAG
AGAAGCTTTCCTTTCGAGGAAGCTTCCGCGTTCCGTATTTAGGGAACGAT
TGGAGTGGCTGGGACTTTCTCTAGTTGCTCTGAGAAGAGATTTCTAGCCC
CTATCCAGTGCTTTTCAATGACATCTATCCGGAAAGGCGCGGGCCTTGCC
CTTCTCACGCTTGGACTAGGGGTTTGGCGGGCATGGGGGCAAGTCACAGT
CGAGACGTGCGACGACCTCATAAGTAGCATCGCGGATGGGGCAACAACGT
TGGAGCTCAAGGGCGACTTCACCTGCATTGAAGAGATCAGCGTCGACGAA
GGCGTGGAAGTATCTATCGACGGGGCCAGCCATACGCTCTCCATCGGTAA
CGATCTGGTGTACGAGGAAGGAACGAATGCACTGATTTACAACAAGGGCA
CCCTCACGCTAACCAACCTCACGGTTACTGTAGCCGATACCTCAGCCGAC
AACAAATTTCGCGCTATTTACAACGAGGGGGACCTGACCGTGAACCTCTG
CACCTTCAGCAGTCTCAACTTGGGAGCGGACCCTGTCGATGACGGAGGGG
TGGTGAGTGGCGTAGGACTTCTGTAGGACATCTGCTAGCGGTAGAGGCGA
TCCTCGGCGTTGAATGTCACACTGGCCTCACAAACGAACAGGTATCGCAC
GAGTTCTCACAGCTTAGAACATTCGTGATGTCCGGTGTTCTGTACTTTCA
AGCTGGCTACTTCCCTCTCCACAAATGTTGGCCATCCCTTCTCGCCGCAC
TCGTTGAGGGTTACTGCATCTATTAATCATAATGCTGTACCCAGCGTCCT
CAACCTTTTGGGCGGAATGTAGGGGGCCTCTCGGCGTTCCTTCCGACTGC
TACCGGCGGGTTTATTTTTTCAAATCTAGCTCTTGCGGCGGATGTCTCGC
AACTTTGCTTTGCTTTGTCTTCGGGGTCGCCGAAATGAAACTGAATCTGA
AAATAGAAAATTTGGTGCAAATTTATGGGAGATGACTGGTGGCAGCATCT
CGTTTCACCGTGCTCTTTAAATTTGAGAGCACAAACAGTTTCTGGCGTGT
CTTTCTAGTGGTTGTACTACAACTGTATTTATGTAATGTATAGACACACT
TATACAGGAGCAGAGTATAGTAGCCGGGTGTACCAGTAGGTTACTAATCC
TGCTCTATGATACTCGTGGGTTAGCTGAACAAGGAAAACGAATATTTCCC
TGTCCCCGTTCGCGCGTTAGAATTTGGTCTCGCGAGGCAGGTTCAGCGGT
CTCACCTTGCGTCAGCTTGCTCACTGTCTACACTCAGCTGAAGTGTTTAC
TCACGAGATTCCTTCCGCGTTCGGCGACGGTGTTGATTTATTTCTTCCGC
GATTGAGTCAGTCCCGAGTTTATCAGGTCACGCAATTGCGGACCGATGGT
GTTCACTGCCGAGAGTCCGCCGGCACAGGGTCAGTAGTCCTCGTGGTATT
TCCACTAACGGGTATGTTCTCACCCAAACCTTTTGACTGCTGAGAAGGTT
TCGATGCGTTTATACCTTCTTGAAACGGGTGCTACCTTTTCAGGTTTCAC
GAATGTACTCGTCTGCGCCGTAAAAATGTCACCCTGACTAATTATACTGC
TGTAGCTCTAATAAATACCTGGTAGAGTTTTTACAGACAGTACTGCACCT
CAACACTATTAACAGTAATATTAATACTCAAAACCACACCCAACCAATAT
CTACTTCACAAACGGGGACTGGGCTGCATCGCGAGAGACATCGAAGGGGG
TAGAGTGAAAAAAAGAAAAAAAATGCCGATTCGCGCTGTAGATGCAAATC
AGAATCTGCGAGACTCGAGTTTTCTCTTTAAAAATAAACTCAGTGAGGCG
CGGTGCTCGAAACCGTCTGACACTATCATAACAAATTGTTGGTTCCACGT
AGTGTATCGATCTGGTTGCGGCACAAACTCACAAAAATCATCCCAATTTT
CTTCGATGAAAGATTGGTACGTACGGTTATGCTGGTCAGTTAGTAACCTC
GAATCTCGGCATATCTCGACGCAGTCACACGAACTGAGATTAAAGAATCG
TGCCATAGAGTGGATAACGATTAATTCGTGGGTACTGTACACAAAATTGA
CTTAACGGTCAACGAGGGAAAGGGACGGTTGAGACCTCGCGATAAAAATT
AAGGCAAGTACCGCAGAAGGAAGGTGGAGAAATCCTGTGTTTGACCTCGG
CTGGTGCGTTCACAAGTCTGACGTCCGCAGTAATTTTATACGCGTAGAAT
GTCTCTGCGGCCTTGTTGTAAAATGTAAATGTACTATTTAGTAAACTATA
AGCCTTTATTGTGTAAGGCCAACCTCTATGGGAAACGAAAAAACAGAAAC
GCAAAATACAGAAATTTGTCATTTCTGTGGCCAAAAAAATCCGTGGGGAA
AAACTGTAGTTGGTCGTTTATGGGATAAAGGAAAAATACAAAAAAAAACG
GGGAGCATATCGGGTTAACCCCGGCATTTTCGGCCACCCATCACCGCGCA
GAGACAGGTGCAAGTATGTACACATGGCGAGTATGGATCAACCGGGTAAG
GTTGCCAGTCCTGCTCGTGGTCAACTGAACAGGGAAAAAAAATATTTCCC
TCTCCGCGTTTGTGCCCGAGACTTTAGTCCGGCGAGACAGGGTCGTTTAG
TACTTAATTACGAGTACATCGCAAATAGAGTTGGCAGAGCGACATCGTTT
CAACAGCTTTTATGAATTTCCTCCAGATCTGCTTGCCCGGGCCCATCACC
TCAACAGATTCTATAAATTTCCTCCAAATCTGCTGCTCCGGCGATCATCG
CACAACTACTGCTGCTCAGCAGCCACCGTACAACAGCACTCGCGAGCTCT
TCTTTGCCGATATTTGATAGGAGGGATGCTACAGTCCCGACCTTCCAATC
GTTCTTGGAAGGCGTGAATCATTTCTGCGGCAAACTAAACTTGTCGAGCC
ACCTACAGAGATGAACCTCCCACAGAAATTCGCCATTTCTGTAGGGCTAC
ATTTCTGCGGCACGGGGCCCATAGCGCCACGTTTACAAAAATTTCGCCAC
AGAAATTTCACATTTCTGTATATTCATGTCGTTTCTGTTTCCCATAAAGG
TTGGCCTACGAAAAAACAGAAACGCAAAATACAGAAATTTGTCATTTCTG
TGGCCAAAAAATCCGTGGGGAAAAACTGTAATTGGTCGTTTATGGGATAA
AGGAAAAATACAAAAAAAATCGGGGAGCATATCGGGTTAACCCCGGCATT
TTCGGCCACCCGTCACCTCAAAAAGACAGGTACAAGTATGTACACATGGC
GAGTATGGATCAACCGGGTAAGGTTGCCAGTCCTGCTCGTGGTCAACTGA
ACAGGAAAAAATAATATTTCCCTCTCCGCGTTTGTGCCCGAGAATTTCGC
CCGGCGAGACAGGGTCGTTTAGTACTTAATTACGAGTATATCGCAAATAG
AGTGGGCAGAGCGACATCGTTTCGATGGCGAGCCGTCGGACGCTCGTGAC
ACGCAGCCCGTCCCTGCTTGATTGATCTCAGGCGCCACCCATTCAACCGC
CCCCGCCGCCGGCGATCAGCTTGTCCAGGTCCATCACCTCAACAGCTTTT
ATAAATTCCCTCCAGATCTGCTTGCCCGGGCCCATCACCTCAACAGATTC
TATAAATATCCTCCAAATCTGCTGCTCCGGCGATCATCGCACAACTACTG
CTGCTCAGCACCCATCGTACAACAGCATTCGCGAGCTCTTCTTTGCCGAT
ATTTGATACTGGTAGGAGGGATGCTACAGTCCCGACCTCCCAATCGTTCT
TGGAAGGCGTGAATCATTTCTGCGGCAAACTAAACTTGACGAGCCACGTA
CAGAAATGAGCCTCATTTCTGTATGTGGGAAGAGAAAAATAACTTCCCAC
AGAAATTCGCCATTTCTGTAGGGCTACATTTCTGCGGCACGGGGCCCATA
GCGCCACGTTTACAAAAATTTCGCCACAGAAATTTCACATTTCTGTATTT
TCATGTCGTTTCTGTTTCACATAAAGGTTGGCCTAAGGGTTGATGGCACC
ATCACTGTTTTTCAGTACAAACCTATTTTATCATGTACTAAGGCCCGATC
TTATGGATCAGAAAAAACGTTATCGAAAAACTTTTTTTCTGACAAGAAAA
TTTCTGATGAGAACACCGATGCGACGTGATTTATGGGACAGAAAAAAACA
TTATCGGAAAATATTGATTCTGACAGTCCTGATGTAGGACCTGGGACTAT
GGTCCTATTTTTTTTGGTGTCGAATGCTCTTCCGTACTGGTATGTTTGCA
TGGTACGGTGCGGCCGCGGCCAGCTGTATTCGTGTGGTTGTGTAAGCTCC
CCACGATTGAAGATCATGTCCTGTGCCACGCCACGGTTGTAAGTAGTACA
AATGTATTTCAAAGCCGATGAATCTCGGCGACTGCAAGTTGTACTCTACT
GGAGATTCTGTTCATAATGTATAACCTGGTACACAGTCTGCTGTATGTTT
TAGATAATAATGCTGTCACCCACAGAAAAAGTCGCGAAGGACTGCTGCGA
GCAGGCCCATTGCCTTGCTTGTGCACCTTCTTACAACCGTTGCGTGGTAC
AGCAGGTGGTCTTCGATCGTTTCGGACTTACACAACCACACGAATGAAGC
TCTAAGGCCGCAACGTACAGTGCAAGATCTGTCTGTGCAATATCTCAGAA
GGTCTAGGTGCGTTCTAGTTTTTCTATAAACATTGCACCGAGGACATGAC
TGTTGTATACGACGCACGTTGCAAAGGCTACAGTGATAGAAGATGTGTTC
TCGGGACTCGATTGCATCTTCCACGTGGAGCAGCCCTAGAACGAGTGCCA
ACTGATTGATATTTTTTATTCTCTGCTTGCAGCGTCGACATGCTGCCATT
GCGACCGTCACCGCTGCGTCACAGTTACCCATGCCTGTCTCCAACCTACA
CGAGGTCTGTGTTTGAAGGCAGATTTGAACTTTTTTTGCGTCCGTCCGTC
CGGCACGCCTTCGCCCACTTCACATAGCGAAGGACTGCTCCTGCGGATAG
GCACATTATATTGTGCACCTACTGTGGCGTGGTACAGTACGTGATCTTTA
ACCATTTCCTTGCACAACCACACGAACGCAGCTCGAAGGCCGCAACGTGC
CATGCAAAGAGTACGACTGTGCAGTACGGCTGTGCAATATGTACTGTACC
GAGGACGTCAACTGCTGCACGACGCACGTTGCAAAAACTAGAGATTTGTT
CTCGGGACACGATTGTATCTTCCTCGGCGAGCAACCCTAGAACGAGTGCC
AACTGATTGATATTTTTGATTCTTAGCTTGCGGTGTGGATATTCTGCCCC
GAGGTCGTCACCGCCGCAACACAGTCATCCATGCCTCTGTCTCCAAGATA
CACGAGGTCTGTGTTTAAAGGCATATATTAGAACTTTTGCGTCCATCCGT
CTGAGGGACGCCTTCGTATCGCTACTAACTATTTTTCTGATAACTTTTTT
TCTGATAACATCTTCCTCCGTTTTTTCCGGATTTTTCGATAACGTTTCCT
CCGAAAGCGCTTCCTCCGAAAAAAGTGATCCGAAAACACGTTTTTCTGAT
CCATAAGATCGACTTTGTGGTCGTTATCAGTTTTTTTTTTTTTTTCGATA
ACGTTTTTTCTGATCCATAAGATCGGGCCTAAAAGTATTCTTGCTTTGTT
CTTGTGTGTCCCTGTATGGCGATTAATGTAATCGTACAGCATAACGGTGG
GTTTCTCCCCGGTAATATACAACGCCGGTACTTTCAACATGCCCACTTCA
TACCAATAGAGGGTGTGGGAAAGAGAGGCGGATATTAATTGGTCCATGGT
GACCTGCTAAGGCAGCACCCGTTCGGAATTACCTTGAGGTTTACTGGCCC
TGTGCCGGCGGACTCTCGGCAGTGAACGCCATCGGTACGCAATTGCGTGA
CCCGATGCCGTATGGCGGTTTCATAAATGGACGCCGCCGCGGAACTCGGG
AGGAATCCCGTAAGCACCAGGTTCAGCCTAAGTATGGAGATGAGCAGGCT
GACGCGGGACGGGACGGCTGAACCCTCTCGCGAGACCAAATTCTCAGGCA
CGCACGGGGACAGGGGAATATCCATTTTCTCTGTTCAGCTGACCACGAGC
AGGATTGGCAACCTTACCCGGTTGATCCATACTCTGCTGTATGTGATGAC
CATACATACATACATACTGTTGACTCAATGTTACCACCATCGGAGAATTC
AGTTAAATGCCATGAAGAGGTTTTGTATTTGCAGCCTAGCTATAATCCCA
CCTAAACGATTTGACATTTTTCCCCCTGACTGGGGGATGCTCAGAAGGTC
TAGTAAATGCGTTCAGATTTTTCTTTTAACATACCCACACCAGGCTGTTA
AATTTTAAATTTAGCCAACCCGCAAAATAAGGTTGCGTTACATGAATCAT
AAGTAGGACTCCGACGACCAACCCTGTGAAATCGACTGTTTTTTTCCCTG
AGAAATTTGTTTATTAGTAGTATGAACAATTTTAGTATAGTAGTAATGGT
AAAAATATGCTCCCTCAAACCTTATCCCTCCGCACATACTCTGTTGAACA
AGCCCATTCTCTCTTTTTGGACGTGGAGCGTCTAGTCTAGTCTAGTCTAG
TCTATTCATACTTTTACTGATTGCTTAGGCGTACGACATGTGGAACCGGC
TCTCTAGCTCTCCTATTAACAGCTCTCTATAATAAAACACTTGTCGGGTG
GACTTGCTCAGAGTTGTTTATTTGGAAGTCCTTGCAACAAAATCTTGAAA
CGATTTTTAATCTGTCAGCGTCTGCAAGGGCAACCGGCAAATAACTTACC
GTAGTATTTGTGACCTCAAGAATCACAAATATATTACATAACTACATCGT
TTGCGAGCACGGTCTACTTTTCCACTCTAATAAATCTAGTGCCACGACTT
TGAAGATGACGGGCTCGATTCCCGCTTCCAATCTTTTCGTAAATTATACC
GGGCATTTGGGACTCGTTGATGCTTTCGCCAAAGCTTGATGTGTGGTCAA
AAGCTTTAAGGTTCTTGGTATATACTCGAGACGAAGGGCATCTTGATGGA
CAAGAGAAACGATGTCAGTTCGAGTAGTCAGACGAACCGTTCACATCCTC
CGTGTCTTGTCTTATCCTCAAACCTGTCCGTTCGTTTCCCGATCCAATTC
AGATATACTCGGAGTCCGCGGGCGGAACCGTGTCGATCGAGAGCAGCGAA
TTCACCTCTAATGGGTGTCGCTTACAAGGAGGCGCAATCCATGCCGCAGC
TGACGAGCAGTTGACGATCACCGACTGTGAGTTTAGTGATAACGAGGCTG
GGACAACCGATGACGAGAGCGCAAGCGGGGGCGATGTCTACGCAGCTGAC
GGGGTTACTCTGGTCGTGCAATCGTCAAACTTTCGGGGTTCCGCGGCAGC
ATACGGCGGTGCTGCGATCCATTGCTGCGGTGCTACCATCACCGGCTCAC
GCTTCATTGACGCGGAGTCCGGGTCGGCAGGCAACGTAAGTTGGCCCCAT
CCACTACCTCCAATTGAGATGGAATGGCATGTTGGAAGGTTTTCCGTCGA
GATAGTGCAGAACTAACTGTCCTCTCGAGCTCGTCTTCCTAAAGCCAATA
TTTCTCCAAGACATGTCATTTATCGCCAATTGAGATGGAATGGCACTGAC
GCTGCATGGACGTTGACGCAACACCTAAGAGGCCTTCTCCGTTCAAAACG
TGATGTTGGAAGGTTTTTCGTCGAGATAGTGCAGAACTGTCCTTTCGAGC
TCGTCTTCCTAAAACCAATATTTCTCCAGGAAATGCCATGTTGTTGAGAA
GTTTGTCAAGGGATCTTTAGTTTGAAATCCAGTCCGCCCTCTGCATCCAA
CACCCACTAACACCTATCAGGAGCACTACGGTGGAGCGATTCTCGTTGGC
CTACCCGACGAAGGATGCACGCAAGAGCTGGAAATGACAAACTCGACCTT
TTCTAAATGCTCGGTTCAAGAAACTGATGGAGCTGGCGGGTCTTTGGCTG
TTTTCGACACATCCGCCACCCTCGACGATATCACGATTAATGATAGTCAA
GGGTCCGCGGTGCTATTCCAGTCTTCTGACGCGGACGGGTCGCACGCGAT
CAAAGTGAGTGGTCCATCCACCGTATCGCCACCTTTCTTCGACTTCTGCA
CTGATACACAGTATGatacaCAGTAATCCGTTGTAGAGTCTAAACGCCTG
AGCCCAACATTCTCAGCATGTTTTCTGTTGAATGAGTTTGTGTAGGCCTA
ACCTAACCCCGTCAGCTCTTGTGCTTGTCATGCGCTGTCTTTGTCGCCGA
CTCGCCAGATGAGCAGCATGGAGTTCCAGTACAACACGGATCCCTCTGCG
GCCTACGCCAGCAACAGTCTGGAACAGGGATCCGCTTTCATTCTCCAAAA
CACCGCCGCGGAGGTGAGAGAGAGGGTGTAGCGTAATGTAACCTCTTTCT
ACCCCTTCCTACAGTAAGTACCACTCCTTCGTCACTCCCCCGAACTGTCG
GTCAGCCAGATATTCGGTGCCAAAGAGGACCCACTATTTTATTTTTACGA
ACATACAACGTACTTGACGTTCGGTCCTGAAAGACAAATGAAAGCTTGCG
AGCCCTTCTTCTCCAGAGGCGCATAGCAAGCAGGAGAAGGGTCGTTGGTC
GTTTTGAGATATTTCCGCAACACGCGCCCAATAGCACCGTTGCCTCTTAT
GTTGCTCATTTGCCACAACCTTTTTTTACTAATACAACAAATTGCTTGTA
CTTCGTTTTTTTTTGTTGTACAACAGGATGAGTCTGTGATGATGGGTACC
TTCGACACCGTACACTGCTACAGCAATGACCCGTACGAGTGCGAGATGGT
GTTCGACCTGGCTGGGGTGACCTACAACGGCGACATCAAGTGCCAGATCT
GTAATATGGACAGCGAAAGGCTGTGGGTCGGCCTAGACGAAAATTCGATC
GCGTGAGTGAGCGTGTGCTGTTACTATTAATAAGTAAGTCTTAAATAAAA
AAGGGCCTGTATCATTCACGACGGCGGAGAAAAATTTTAAACTCTGCTGA
GCAACTTTCCCGGAAGTTCCATCTCGCCAAGCCCGGCGTTTTTATTTTGT
GCCTCGACAGTATTCCTTTGTATGTTTCGTCTGTGAAAAGTTACTGTACG
CACTACTGTATTCAGTGTTAGTATATTGAACTATTGATAGACTGCTGTGT
TCTGTCAAGCTGCCCAGATCTGCCTAGATCGCGGTCAAGTGGCCTTTCCT
TTCCCTTCTAATAGTACATTCCGCGTCAGCACTCTAATAATATGTATATA
ATGTTTCAGTCGTACTCTATTTGCGTGAGCAGCACCCCCTGACGGGAATC
GATATTCGAACCTTCTGGTATTATACCAATCCAATCCTTTAATTTGACAG
CGACGGGAGCGGTGATACCGAAGACAGCTCCTCTTCCGGATCGTCGGATT
CCAACGAGGGCATCGTAATCGGGCTCTCGCTCGCTTTGGGCTTGACGCTG
GTTGTCATCGGAGCGTTGGCGGTGTGGAAGATTAGGGTCCGCAAGAACGC
CCGCCGTCTAATGGAGGACATGGGCGACGGCGACCTCTAATTAGTACGCC
GGAGTGGTCGACGGGTTAATGCTGGTACCAAGAGTGGATCCATCGCTTGT
GGGTGATGATGTTGAAGGGTAACAGACAGAAAAGACTTGATCTTTCTAAA
GCAAACAGAGGAGGATGCTCGTAAGTATTTTGATTTGATTTGATTCACGA
TGTTCTCGCACCCATGTACAGGAACAGTTCTTTCCTGGTCGTGCTACGGT
TTGGAAACTGATGATAGTCCTGGGTCATGCCTATGCGGTGCGATCATAGG
CAAGGCTAAGGCGTCTCGCGCAACTCCCGTTGTAGCTTTTGGGGCGACGC
TTGAGGGAGGTGCGCTGCTGCCGCTCGAGCCAGAGAAGATATCTCTGGCT
GTCCAGAAGGGATGTGCAGAATTTGGGAGTATCGCAAAGAGGCATTGGCA
TTGGAAGGAGCAGCGTAGTCGCGATAGCGATTAACATACCAATTTGTGTA
ACAGGGTAATCTGACGATCAGAGCGCGGGCATGTGCGACTAGTATATGAT
GGGTGGCGAAGCAGGGACAAGTAAGAACTGTGTTGTCGCTTTAATTAAAA
ACGCCGCATCCGTATTCGTCCGTCGCGAGGCCTTGGTCAGCGCCGCTCGG
GTTGGCGAGAATGAACGGGAAAAGAAAAAAGGTCTGACGGAAATGAAAGG
TCAGGTGGAAGGGGGTTGAATGAGACGGCGGATCAGATGGAAAACCTTTT
CGGTTCGTACTGTGTTAGTCTAATTAATTAGTGCAATACCTCCTCCTTTG
GGTGTATTTGGTTGTGAGCGCAAGCCGGGTTCTCTTGTTGGCGAAGCTGT
CGGCGCGCTTGGAGAGTTCGATTTCCTTTCAACTGTAATGGCGGCTTGCA
TTGATTTGTTCCTCATTGCGTGAGGTATGTTACCTATCACGTTGTATGCT
GCATACAGTATCCGCTGCTCTCGCCTAAAGTAAAGTATTGAGTGTTTCCA
AATAGTAAGCGGGACAGACGAGCTTGCTGTATGCGGACGTTCCACATTTC
TGTATACGATATTGGGAAATGATAGCCTCCGGCGGCTTCGATTGTTTTCC
GTCAGAGACTAGAACGGTGAGTGGAAAGCCTAGGAACGCGGTGCGATCCT
GGGAACCTCACTCGTCAATGCTTGAGCAGTCCCACAGCTTCTCCGACCTT
TTGTAGTGATTGTTTCAAGGGCTTGTAGTCCGGGTCCTAGCATAACTGTA
CTTTTTAGTTACATTATTGTTATTGAGTAAACGAGGTCAGCACTGTCCTA
TTTGGGGCTCGAGCGTTTATTTGACATTCCGTCAAATAATTTCTTCCCTT
TATTTTGTTTTTGTTTTTTTCGAGATTTCACTCTTACACGTATGATTTTT
CCACGTTTTAGTCTCTAGTTATAACTTAGTCTC back to topCoding sequence (CDS) from alignment at F-serratus_M_contig1425:202093..213275+ >mRNA_F-serratus_M_contig1425.3044.1 ID=mRNA_F-serratus_M_contig1425.3044.1|Name=mRNA_F-serratus_M_contig1425.3044.1|organism=Fucus serratus male|type=CDS|length=2946bp|location=Sequence derived from alignment at F-serratus_M_contig1425:202093..213275+ (Fucus serratus male) ATGACATCTATCCGGAAAGGCGCGGGCCTTGCCCTTCTCACGCTTGGACT AGGGGTTTGGCGGGCATGGGGGCAAGTCACAGTCGAGACGTGCGACGACC TCATAAGTAGCATCGCGGATGGGGCAACAACGTTGGAGCTCAAGGGCGAC TTCACCTGCATTGAAGAGATCAGCGTCGACGAAGGCGTGGAAGTATCTAT CGACGGGGCCAGCCATACGCTCTCCATCGGTAACGATCTGGTGTACGAGG AAGGAACGAATGCACTGATTTACAACAAGGGCACCCTCACGCTAACCAAC CTCACGGTTACTGTAGCCGATACCTCAGCCGACAACAAATTTCGCGCTAT TTACAACGAGGGGGACCTGACCGTGAACCTCTGCACCTTCAGCAGTCTCA ACTTGGGAGCGGACCCTGTCGATGACGGAGGGGTGATGACATCTATCCGG AAAGGCGCGGGCCTTGCCCTTCTCACGCTTGGACTAGGGGTTTGGCGGGC ATGGGGGCAAGTCACAGTCGAGACGTGCGACGACCTCATAAGTAGCATCG CGGATGGGGCAACAACGTTGGAGCTCAAGGGCGACTTCACCTGCATTGAA GAGATCAGCGTCGACGAAGGCGTGGAAGTATCTATCGACGGGGCCAGCCA TACGCTCTCCATCGGTAACGATCTGGTGTACGAGGAAGGAACGAATGCAC TGATTTACAACAAGGGCACCCTCACGCTAACCAACCTCACGGTTACTGTA GCCGATACCTCAGCCGACAACAAATTTCGCGCTATTTACAACGAGGGGGA CCTGACCGTGAACCTCTGCACCTTCAGCAGTCTCAACTTGGGAGCGGACC CTGTCGATGACGGAGGGGTGATATACTCGGAGTCCGCGGGCGGAACCGTG TCGATCGAGAGCAGCGAATTCACCTCTAATGGGTGTCGCTTACAAGGAGG CGCAATCCATGCCGCAGCTGACGAGCAGTTGACGATCACCGACTGTGAGT TTAGTGATAACGAGGCTGGGACAACCGATGACGAGAGCGCAAGCGGGGGC GATGTCTACGCAGCTGACGGGGTTACTCTGGTCGTGCAATCGTCAAACTT TCGGGGTTCCGCGGCAGCATACGGCGGTGCTGCGATCCATTGCTGCGGTG CTACCATCACCGGCTCACGCTTCATTGACGCGGAGTCCGGGTCGGCAGGC AACATATACTCGGAGTCCGCGGGCGGAACCGTGTCGATCGAGAGCAGCGA ATTCACCTCTAATGGGTGTCGCTTACAAGGAGGCGCAATCCATGCCGCAG CTGACGAGCAGTTGACGATCACCGACTGTGAGTTTAGTGATAACGAGGCT GGGACAACCGATGACGAGAGCGCAAGCGGGGGCGATGTCTACGCAGCTGA CGGGGTTACTCTGGTCGTGCAATCGTCAAACTTTCGGGGTTCCGCGGCAG CATACGGCGGTGCTGCGATCCATTGCTGCGGTGCTACCATCACCGGCTCA CGCTTCATTGACGCGGAGTCCGGGTCGGCAGGCAACGAGCACTACGGTGG AGCGATTCTCGTTGGCCTACCCGACGAAGGATGCACGCAAGAGCTGGAAA TGACAAACTCGACCTTTTCTAAATGCTCGGTTCAAGAAACTGATGGAGCT GGCGGGTCTTTGGCTGTTTTCGACACATCCGCCACCCTCGACGATATCAC GATTAATGATAGTCAAGGGTCCGCGGTGCTATTCCAGTCTTCTGACGCGG ACGGGTCGCACGCGATCAAAGAGCACTACGGTGGAGCGATTCTCGTTGGC CTACCCGACGAAGGATGCACGCAAGAGCTGGAAATGACAAACTCGACCTT TTCTAAATGCTCGGTTCAAGAAACTGATGGAGCTGGCGGGTCTTTGGCTG TTTTCGACACATCCGCCACCCTCGACGATATCACGATTAATGATAGTCAA GGGTCCGCGGTGCTATTCCAGTCTTCTGACGCGGACGGGTCGCACGCGAT CAAAATGAGCAGCATGGAGTTCCAGTACAACACGGATCCCTCTGCGGCCT ACGCCAGCAACAGTCTGGAACAGGGATCCGCTTTCATTCTCCAAAACACC GCCGCGGAGATGAGCAGCATGGAGTTCCAGTACAACACGGATCCCTCTGC GGCCTACGCCAGCAACAGTCTGGAACAGGGATCCGCTTTCATTCTCCAAA ACACCGCCGCGGAGGATGAGTCTGTGATGATGGGTACCTTCGACACCGTA CACTGCTACAGCAATGACCCGTACGAGTGCGAGATGGTGTTCGACCTGGC TGGGGTGACCTACAACGGCGACATCAAGTGCCAGATCTGTAATATGGACA GCGAAAGGCTGTGGGTCGGCCTAGACGAAAATTCGATCGCGATGAGTCTG TGATGATGGGTACCTTCGACACCGTACACTGCTACAGCAATGACCCGTAC GAGTGCGAGATGGTGTTCGACCTGGCTGGGGTGACCTACAACGGCGACAT CAAGTGCCAGATCTGTAATATGGACAGCGAAAGGCTGTGGGTCGGCCTAG ACGAAAATTCGATCGCCGACGGGAGCGGTGATACCGAAGACAGCTCCTCT TCCGGATCGTCGGATTCCAACGAGGGCATCGTAATCGGGCTCTCGCTCGC TTTGGGCTTGACGCTGGTTGTCATCGGAGCGTTGGCGGTGTGGAAGATTA GGGTCCGCAAGAACGCCCGCCGTCTAATGGAGGACATGGGCGACGGCGAC CTCTAACGACGGGAGCGGTGATACCGAAGACAGCTCCTCTTCCGGATCGT CGGATTCCAACGAGGGCATCGTAATCGGGCTCTCGCTCGCTTTGGGCTTG ACGCTGGTTGTCATCGGAGCGTTGGCGGTGTGGAAGATTAGGGTCCGCAA GAACGCCCGCCGTCTAATGGAGGACATGGGCGACGGCGACCTCTAA back to top
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