prot_F-serratus_M_contig1305.2296.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1305.2296.1
Unique Name	prot_F-serratus_M_contig1305.2296.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	138

Homology

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BLAST of mRNA_F-serratus_M_contig1305.2296.1 vs. uniprot
Match: A0A0U1WNN6_SARFS (Cytochrome b n=27 Tax=Fucales TaxID=3009 RepID=A0A0U1WNN6_SARFS)

HSP 1 Score: 277 bits (708), Expect = 2.290e-90
Identity = 133/139 (95.68%), Postives = 137/139 (98.56%), Query Frame = 0

Query:    1 MHYASETHYAFSSVEHIMRDVKSGWLIRYMHANGA-FFFILVHAHIFRGLYYGSYMEPRQHLWWSGAVIYVLMMATAFIGYVLPWGQMSFWGATVITSFFSIIPVIGKEVVMWIWGGFTVGNPTLNRFYSLYYLLPFLI 138
            MHYASETHYAFSSVEHIMRDVKSGWLIRYMHANGA FFF+LV+AHIFRGLYYGSYMEPRQHLWWSG +IYVLMMATAFIGYVLPWGQMSFWGATVITSFFSIIPVIGKEVVMWIWGGFTVGNPTLNRFYSL+YLLPFLI
Sbjct:   52 MHYASETHYAFSSVEHIMRDVKSGWLIRYMHANGASFFFMLVYAHIFRGLYYGSYMEPRQHLWWSGTLIYVLMMATAFIGYVLPWGQMSFWGATVITSFFSIIPVIGKEVVMWIWGGFTVGNPTLNRFYSLHYLLPFLI 190

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BLAST of mRNA_F-serratus_M_contig1305.2296.1 vs. uniprot
Match: E6ZES8_ECTSI (Cytochrome b n=15 Tax=Phaeophyceae TaxID=2870 RepID=E6ZES8_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 3.950e-86
Identity = 126/139 (90.65%), Postives = 133/139 (95.68%), Query Frame = 0

Query:    1 MHYASETHYAFSSVEHIMRDVKSGWLIRYMHANGA-FFFILVHAHIFRGLYYGSYMEPRQHLWWSGAVIYVLMMATAFIGYVLPWGQMSFWGATVITSFFSIIPVIGKEVVMWIWGGFTVGNPTLNRFYSLYYLLPFLI 138
            MHYA ETHYAFSSVEHIMRDVKSGWLIRYMHANGA FFFI+V+AHIFRGLYYGSYMEPRQ LWWSGA+IYVLMMATAFIGYVLPWGQMSFWGATVITS FSI P IGKEVVMW+WGGFTVGNPTLNRF+SL+YLLPF+I
Sbjct:   52 MHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGALIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFII 190

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BLAST of mRNA_F-serratus_M_contig1305.2296.1 vs. uniprot
Match: D0IPB5_SACJA (Cytochrome b n=38 Tax=Phaeophyceae TaxID=2870 RepID=D0IPB5_SACJA)

HSP 1 Score: 265 bits (676), Expect = 6.680e-86
Identity = 126/139 (90.65%), Postives = 132/139 (94.96%), Query Frame = 0

Query:    1 MHYASETHYAFSSVEHIMRDVKSGWLIRYMHANGA-FFFILVHAHIFRGLYYGSYMEPRQHLWWSGAVIYVLMMATAFIGYVLPWGQMSFWGATVITSFFSIIPVIGKEVVMWIWGGFTVGNPTLNRFYSLYYLLPFLI 138
            MHYA ETHYAFSSVEHIMRDVKSGWLIRYMHANGA FFFI+V+AHIFRGLYYGSYMEPRQ LWWSG VIYVLMMATAFIGYVLPWGQMSFWGATVITS FSI P IGKEVVMW+WGGFTVGNPTLNRF+SL+YLLPF+I
Sbjct:   52 MHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGGVIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFII 190

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BLAST of mRNA_F-serratus_M_contig1305.2296.1 vs. uniprot
Match: A0A8F0FCD4_9PHAE (Cytochrome b n=1 Tax=Laminaria ephemera TaxID=309364 RepID=A0A8F0FCD4_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 3.520e-83
Identity = 122/139 (87.77%), Postives = 130/139 (93.53%), Query Frame = 0

Query:    1 MHYASETHYAFSSVEHIMRDVKSGWLIRYMHANGA-FFFILVHAHIFRGLYYGSYMEPRQHLWWSGAVIYVLMMATAFIGYVLPWGQMSFWGATVITSFFSIIPVIGKEVVMWIWGGFTVGNPTLNRFYSLYYLLPFLI 138
            MHYA ETHYAFSSVEHIMRDV++GWLIRYMHANGA FFFI+V+AHIFRGLYYGSYM PR  LWWSG VIYVLMMATAFIGYVLPWGQMSFWGATVITS FSI P IGKEVVMW+WGGFTVGNPTLNRF+SL+YLLPF+I
Sbjct:   52 MHYAGETHYAFSSVEHIMRDVENGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMAPRHQLWWSGGVIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFII 190

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BLAST of mRNA_F-serratus_M_contig1305.2296.1 vs. uniprot
Match: Q2TUA7_DICDH (Cytochrome b n=2 Tax=Dictyotaceae TaxID=2874 RepID=Q2TUA7_DICDH)

HSP 1 Score: 254 bits (650), Expect = 4.770e-82
Identity = 116/139 (83.45%), Postives = 133/139 (95.68%), Query Frame = 0

Query:    1 MHYASETHYAFSSVEHIMRDVKSGWLIRYMHANGA-FFFILVHAHIFRGLYYGSYMEPRQHLWWSGAVIYVLMMATAFIGYVLPWGQMSFWGATVITSFFSIIPVIGKEVVMWIWGGFTVGNPTLNRFYSLYYLLPFLI 138
            MHY SETHYAF+S+EHIMRDV +GWLIRY+HANGA FFFI+V+AHIFRGLYYGS+MEPRQ LWWSGA+IYVLMMATAFIGYVLPWGQMSFWG TVIT+ F++IPVIGK++VMWIWGG+TVGNPTLNRF+SL+Y+LPFLI
Sbjct:   52 MHYVSETHYAFASIEHIMRDVDNGWLIRYLHANGASFFFIVVYAHIFRGLYYGSFMEPRQSLWWSGAIIYVLMMATAFIGYVLPWGQMSFWGVTVITNLFTVIPVIGKDIVMWIWGGYTVGNPTLNRFFSLHYVLPFLI 190

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BLAST of mRNA_F-serratus_M_contig1305.2296.1 vs. uniprot
Match: A0A8E8PEC1_9PHAE (Cytochrome b n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E8PEC1_9PHAE)

HSP 1 Score: 253 bits (647), Expect = 5.490e-81
Identity = 117/139 (84.17%), Postives = 130/139 (93.53%), Query Frame = 0

Query:    1 MHYASETHYAFSSVEHIMRDVKSGWLIRYMHANGA-FFFILVHAHIFRGLYYGSYMEPRQHLWWSGAVIYVLMMATAFIGYVLPWGQMSFWGATVITSFFSIIPVIGKEVVMWIWGGFTVGNPTLNRFYSLYYLLPFLI 138
            MHY S+THYAFSS+EHIMRDVK GWLIRY+H+NGA  FFI+V+AHIFRGLY+GS+MEPRQ LWWSG VIY+LMMATAFIGYVLPWGQMSFWGATVITS FSI+P +G+EVVMWIWGGFTVGNPTLNRFYSL+Y LPFLI
Sbjct:   52 MHYVSDTHYAFSSIEHIMRDVKGGWLIRYIHSNGASLFFIVVYAHIFRGLYFGSFMEPRQQLWWSGGVIYILMMATAFIGYVLPWGQMSFWGATVITSLFSILPSVGREVVMWIWGGFTVGNPTLNRFYSLHYFLPFLI 190

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BLAST of mRNA_F-serratus_M_contig1305.2296.1 vs. uniprot
Match: A0A0A7LKY8_SACLA (Cytochrome b n=14 Tax=Phaeophyceae TaxID=2870 RepID=A0A0A7LKY8_SACLA)

HSP 1 Score: 251 bits (642), Expect = 9.200e-81
Identity = 122/139 (87.77%), Postives = 128/139 (92.09%), Query Frame = 0

Query:    1 MHYASETHYAFSSVEHIMRDVKSGWLIRYMHANGA-FFFILVHAHIFRGLYYGSYMEPRQHLWWSGAVIYVLMMATAFIGYVLPWGQMSFWGATVITSFFSIIPVIGKEVVMWIWGGFTVGNPTLNRFYSLYYLLPFLI 138
            MHYA ETHYAFSSVEHIMRDVKSGWLIRYMHANGA FFFI+V+AHIFRGLYYGSYMEPRQ LWWSG VIYVLMMATAFIGYVL  GQMSFWGATVITS FSI P IGKEVVMW+WGGFT  NPTLNRF+SL+YLLPF+I
Sbjct:   52 MHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGGVIYVLMMATAFIGYVLALGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTAVNPTLNRFFSLHYLLPFII 190

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BLAST of mRNA_F-serratus_M_contig1305.2296.1 vs. uniprot
Match: A0A7S6UA51_9STRA (Cytochrome b n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6UA51_9STRA)

HSP 1 Score: 228 bits (580), Expect = 1.910e-71
Identity = 104/139 (74.82%), Postives = 123/139 (88.49%), Query Frame = 0

Query:    1 MHYASETHYAFSSVEHIMRDVKSGWLIRYMHANGA-FFFILVHAHIFRGLYYGSYMEPRQHLWWSGAVIYVLMMATAFIGYVLPWGQMSFWGATVITSFFSIIPVIGKEVVMWIWGGFTVGNPTLNRFYSLYYLLPFLI 138
            MHY  E H AFSS+EHIMRDV +GWL+RY+HANGA FFFI+V+ HIFRGLYYGSY+EPRQ LW SG +I++LMMATAF+GYVLPWGQMSFWGATVIT+ FS IPV G  +V W+WGGF+VGNPTLNRF+SL+YL+PF+I
Sbjct:   54 MHYTPEIHLAFSSLEHIMRDVNNGWLVRYIHANGASFFFIVVYCHIFRGLYYGSYIEPRQELWCSGVIIFLLMMATAFMGYVLPWGQMSFWGATVITNLFSAIPVAGDAIVQWLWGGFSVGNPTLNRFFSLHYLMPFVI 192

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BLAST of mRNA_F-serratus_M_contig1305.2296.1 vs. uniprot
Match: E5DIL3_9STRA (Cytochrome b (Fragment) n=2 Tax=Synura TaxID=2991 RepID=E5DIL3_9STRA)

HSP 1 Score: 219 bits (557), Expect = 1.590e-69
Identity = 103/139 (74.10%), Postives = 120/139 (86.33%), Query Frame = 0

Query:    1 MHYASETHYAFSSVEHIMRDVKSGWLIRYMHANGA-FFFILVHAHIFRGLYYGSYMEPRQHLWWSGAVIYVLMMATAFIGYVLPWGQMSFWGATVITSFFSIIPVIGKEVVMWIWGGFTVGNPTLNRFYSLYYLLPFLI 138
            MHY   T YAF+SVEHIMR V +GWLIRYMHANGA FFFI+V+ HIFRGLYYGSY+ PR  LW SG +I++LMMATAF+GYVLPWGQMSFWGATVIT+ FS IP++GK +V W+WGGF+V N TLNRF+SL+YLLPFLI
Sbjct:    8 MHYTPHTEYAFNSVEHIMRHVNNGWLIRYMHANGASFFFIVVYCHIFRGLYYGSYIYPRGLLWGSGVIIFLLMMATAFMGYVLPWGQMSFWGATVITNLFSAIPLVGKAIVEWLWGGFSVDNATLNRFFSLHYLLPFLI 146

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BLAST of mRNA_F-serratus_M_contig1305.2296.1 vs. uniprot
Match: A0A3Q8H9T3_9STRA (Cytochrome b (Fragment) n=22 Tax=Pythiaceae TaxID=4782 RepID=A0A3Q8H9T3_9STRA)

HSP 1 Score: 218 bits (555), Expect = 6.870e-69
Identity = 101/139 (72.66%), Postives = 120/139 (86.33%), Query Frame = 0

Query:    1 MHYASETHYAFSSVEHIMRDVKSGWLIRYMHANGA-FFFILVHAHIFRGLYYGSYMEPRQHLWWSGAVIYVLMMATAFIGYVLPWGQMSFWGATVITSFFSIIPVIGKEVVMWIWGGFTVGNPTLNRFYSLYYLLPFLI 138
            MHY      AF+SVEHIMRDV +GWLIRY HANGA FFFI+V+ HIFRGLYYGSY+ PR++LW SG VI++LMMATAF+GYVLPWGQMSFWGATVIT+ FS +PVIGK++V W+WGGF V NPTLNRF+SL++ LPF+I
Sbjct:   17 MHYTPHIDLAFNSVEHIMRDVNNGWLIRYTHANGASFFFIVVYVHIFRGLYYGSYITPRENLWCSGVVIFILMMATAFMGYVLPWGQMSFWGATVITNLFSAVPVIGKDIVDWLWGGFAVDNPTLNRFFSLHFTLPFVI 155

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1305.2296.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1305.2296.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0U1WNN6_SARFS	2.290e-90	95.68	Cytochrome b n=27 Tax=Fucales TaxID=3009 RepID=A0A...	[more]
E6ZES8_ECTSI	3.950e-86	90.65	Cytochrome b n=15 Tax=Phaeophyceae TaxID=2870 RepI...	[more]
D0IPB5_SACJA	6.680e-86	90.65	Cytochrome b n=38 Tax=Phaeophyceae TaxID=2870 RepI...	[more]
A0A8F0FCD4_9PHAE	3.520e-83	87.77	Cytochrome b n=1 Tax=Laminaria ephemera TaxID=3093...	[more]
Q2TUA7_DICDH	4.770e-82	83.45	Cytochrome b n=2 Tax=Dictyotaceae TaxID=2874 RepID...	[more]
A0A8E8PEC1_9PHAE	5.490e-81	84.17	Cytochrome b n=1 Tax=Phaeophyceae sp. TaxID=224924...	[more]
A0A0A7LKY8_SACLA	9.200e-81	87.77	Cytochrome b n=14 Tax=Phaeophyceae TaxID=2870 RepI...	[more]
A0A7S6UA51_9STRA	1.910e-71	74.82	Cytochrome b n=1 Tax=Schizocladia ischiensis TaxID...	[more]
E5DIL3_9STRA	1.590e-69	74.10	Cytochrome b (Fragment) n=2 Tax=Synura TaxID=2991 ...	[more]
A0A3Q8H9T3_9STRA	6.870e-69	72.66	Cytochrome b (Fragment) n=22 Tax=Pythiaceae TaxID=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005797	Cytochrome b/b6, N-terminal	PFAM	PF00033	Cytochrome_B	coord: 1..138 e-value: 2.3E-54 score: 184.1
IPR005797	Cytochrome b/b6, N-terminal	PROSITE	PS51002	CYTB_NTER	coord: 1..138 score: 26.41
IPR027387	Cytochrome b/b6-like domain superfamily	GENE3D	1.20.810.10		coord: 1..138 e-value: 1.3E-57 score: 197.4
None	No IPR available	PANTHER	PTHR19271	CYTOCHROME B	coord: 1..138
None	No IPR available	PANTHER	PTHR19271:SF5	CYTOCHROME B	coord: 1..138
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 50..60
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 29..49
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 61..82
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 88..106
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 107..138
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 83..87
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..28
None	No IPR available	TMHMM	TMhelix		coord: 90..112
None	No IPR available	TMHMM	TMhelix		coord: 24..46
None	No IPR available	TMHMM	TMhelix		coord: 61..83
IPR016174	Di-haem cytochrome, transmembrane	SUPERFAMILY	81342	Transmembrane di-heme cytochromes	coord: 1..138

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1305	contig	F-serratus_M_contig1305:6596..7009 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1305.2296.1	mRNA_F-serratus_M_contig1305.2296.1	Fucus serratus male	mRNA	F-serratus_M_contig1305 6587..7009 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1305.2296.1 ID=prot_F-serratus_M_contig1305.2296.1|Name=mRNA_F-serratus_M_contig1305.2296.1|organism=Fucus serratus male|type=polypeptide|length=138bp
MHYASETHYAFSSVEHIMRDVKSGWLIRYMHANGAFFFILVHAHIFRGLY
YGSYMEPRQHLWWSGAVIYVLMMATAFIGYVLPWGQMSFWGATVITSFFS
IIPVIGKEVVMWIWGGFTVGNPTLNRFYSLYYLLPFLI

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005797	Cyt_b/b6_N
IPR027387	Cytb/b6-like_sf
IPR016174	Di-haem_cyt_TM