prot_F-serratus_M_contig1295.2173.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1295.2173.1
Unique Nameprot_F-serratus_M_contig1295.2173.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length317
Homology
BLAST of mRNA_F-serratus_M_contig1295.2173.1 vs. uniprot
Match: A5B4D6_VITVI (Integrase catalytic domain-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5B4D6_VITVI)

HSP 1 Score: 119 bits (298), Expect = 3.560e-26
Identity = 79/236 (33.47%), Postives = 117/236 (49.58%), Query Frame = 0
Query:   37 RFLAQDFRQIKGIHYQESSLPTPTQSSIRMALAVMLLLDWEGRQLDVEITFLEADVELPDGYRDSPS-------------------DDLLRPSETKQDEHRVLEDLRSSFLVKDLGEIVYYLGCHITRDRKARTVMFDQRRYAQTVTDRFKIR--KTRVVPVSGGRAPLSKADGPQNDAEITEMRGIPYREAVGALMWVANMTRPDLAYTAHMLAKSGDNLGPGHWKAVVKALQYL 251
            R + + + Q +GI ++E+  P  T+ S R+ +A++   D E  Q+DV+ TFL  D++  D Y + P+                   D ++ P+  K++       +     ++DLGE  Y LG  I RDR    +   QR Y + +  RF +   K+   P+  G    SKA  PQND EI EMR IPY   VG+LM+    TR D+A+   ML +   N G  HWKA  K L+YL
Sbjct:  563 RLVVKGYSQREGIDFKENFSPVXTKDSFRVIMAIVAHFDLELHQMDVKTTFLNGDLDK-DVYMEQPTSFTEVGKEHLALRXWYLKFDRIITPNGFKEN------TVDRCIYLRDLGEASYVLGIKILRDRANGVLKLSQRTYIEKILKRFNMHNCKSSKTPIMKGDK--SKAQCPQNDDEIEEMRTIPYSSVVGSLMYAQVCTRLDIAFVVGMLRRYLSNPGSQHWKAXKKVLRYL 789          
BLAST of mRNA_F-serratus_M_contig1295.2173.1 vs. uniprot
Match: A0A2P4XRY4_9STRA (Integrase catalytic core protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XRY4_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.970e-25
Identity = 81/243 (33.33%), Postives = 119/243 (48.97%), Query Frame = 0
Query:   37 RFLAQDFRQIKGIHYQESSLPTPTQSSIRMALAVMLLLDWEGRQLDVEITFLEADVE------LPDGYRDSPS--------------------DDLLRPSETKQDEHRVLEDLRSSFLVKDLGEIVYYLGCHITRDRKARTVMFDQRRYAQTVTDRFKIRKTR-VVPVSGGRAPLSKADGPQNDAEITEMRGIPYREAVGALMWVANMTRPDLAYTAHMLAKSGDNLGPGHWKAVVKALQYLK 252
            R +A+ F Q  GI Y E+  P   + SI    A+    D E   +DV+  FL  DVE       PDG+ D P+                    DDL+  S TK D   + E LRS F +K+LG++ Y LG  I R R+   VM +QR Y + + ++  + K + +   +   A L K+   +++  + +    PYRE VGALM++A  TRPD+AY    +AK  +     HW A  + L+YLK
Sbjct:  564 RLVAKGFTQRPGIDYTETFAPVARKESINAVAAIAAEEDMEAENVDVDTAFLYGDVEEELYMDQPDGFADQPTRIRSACWDKNSTYSIVIVYVDDLMIFSRTKDDIAEIKEALRSEFSIKELGDLKYCLGIEIHRKREKMIVM-NQRAYIKRLAEKSGVDKCKDIYTPADSSAKLMKSS--EDEYFVAKY---PYRELVGALMYLATSTRPDIAYAVGEVAKFCERYNKSHWVAAKRILKYLK 800          
BLAST of mRNA_F-serratus_M_contig1295.2173.1 vs. uniprot
Match: A0A8H7C626_AGABI (Uncharacterized protein n=1 Tax=Agaricus bisporus var. burnettii TaxID=192524 RepID=A0A8H7C626_AGABI)

HSP 1 Score: 112 bits (281), Expect = 3.880e-24
Identity = 81/283 (28.62%), Postives = 127/283 (44.88%), Query Frame = 0
Query:    7 RGVRKAIDRLKGKIVLGTKIVIKRKVGQDGRFL-------AQDFRQIKGIHYQESSLPTPTQSSIRMALAVMLLLDWEGRQLDVEITFLEADVELPDGYRDSP----------------------------SDDLLRPSETKQDEHRVLEDLRSSFLVKDLGEIVYYLGCHITRDRKARTVMFDQRRYAQTVTDRFKIR--KTRVVPVSGGRAPLSKADGPQNDAEITEMRGIPYREAVGALMWVANMTRPDLAYTAHMLAKSGDNLGPGHWKAVVKALQYLK 252
            + V + + R +GK V+ ++ V   K    G  +       A+ F Q+ G  Y +         S+R+   V   L+ E           E  +E P G+ +                              +DD+L  S T+  + R  ++L  S+ +KDLG   + LG  + RD K  TV   Q  Y + + DRF +   K R  P+  G   LS  D P++  E+ +M+ IPYREA+G+LMW+   TRPDL+Y  ++L++   N G  HW A+   + YLK
Sbjct:  120 KDVYRLVPRPEGKNVVQSRWVFANKYDDTGAIVSRKACLVAKGFTQVIGEDYDKMYALVARLESVRLVNFVSAFLNSEN--------VFEVFMEQPPGFEEGGVTSYYTSRADPQIRSRVVGDELTLTSTWTDDILGVSSTQAGKVRAKQELEKSYELKDLGTASFILGMKMERDEKTGTVTLSQCAYCERILDRFHMADAKPRSTPLPAGLT-LSTDDAPKSLEEMKDMKNIPYREALGSLMWLQVATRPDLSYAVNLLSRFASNPGRAHWNAIKHTIAYLK 393          
BLAST of mRNA_F-serratus_M_contig1295.2173.1 vs. uniprot
Match: A0A8H7F4A3_AGABI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Agaricus bisporus var. burnettii TaxID=192524 RepID=A0A8H7F4A3_AGABI)

HSP 1 Score: 112 bits (281), Expect = 5.560e-24
Identity = 61/152 (40.13%), Postives = 88/152 (57.89%), Query Frame = 0
Query:  103 SDDLLRPSETKQDEHRVLEDLRSSFLVKDLGEIVYYLGCHITRDRKARTVMFDQRRYAQTVTDRFKIR--KTRVVPVSGGRAPLSKADGPQNDAEITEMRGIPYREAVGALMWVANMTRPDLAYTAHMLAKSGDNLGPGHWKAVVKALQYLK 252
            +DD+L  S T+  E    E+LRSS  +KDLG+  Y LG  I  D     +   QR Y++ +  +F +   K R  P+  G   LS  D PQ+  E +EMR +PYREA+G+LMW+   TRPDL++  ++L++  +N G  HW A+   L YLK
Sbjct:  435 TDDILGASSTEIGESTAKEELRSSHELKDLGQAKYILGRRIETDDTTGCIKLSQRAYSERIIKKFNMSDAKPRSTPLPAGIV-LSVDDSPQSAEESSEMRNVPYREALGSLMWLQVATRPDLSFAVNLLSRFANNPGQAHWSALKHTLAYLK 585          
BLAST of mRNA_F-serratus_M_contig1295.2173.1 vs. uniprot
Match: A0A4S4K4A0_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4K4A0_9AGAM)

HSP 1 Score: 104 bits (259), Expect = 2.960e-23
Identity = 55/136 (40.44%), Postives = 79/136 (58.09%), Query Frame = 0
Query:  119 VLEDLRSSFLVKDLGEIVYYLGCHITRDRKARTVMFDQRRYAQTVTDRFKIRKTRVV--PVSGGRAPLSKADGPQNDAEITEMRGIPYREAVGALMWVANMTRPDLAYTAHMLAKSGDNLGPGHWKAVVKALQYLK 252
            V E+L   F + DLG   + LG  + RDR  R +   QR+Y   + +RF++     V  P+  G   LSKA  P++  EI  M+ +PYR+ VGALM++A  TRPD++Y   +LA+   N GPGHWKA     +YL+
Sbjct:   14 VKEELEKHFKLHDLGPTSFLLGVRVERDRSKRLLSLSQRQYITDILERFEMSNCTTVTTPLPDGHR-LSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQ 148          
BLAST of mRNA_F-serratus_M_contig1295.2173.1 vs. uniprot
Match: A0A4S4LBP1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4LBP1_9AGAM)

HSP 1 Score: 105 bits (261), Expect = 3.380e-22
Identity = 57/151 (37.75%), Postives = 86/151 (56.95%), Query Frame = 0
Query:  104 DDLLRPSETKQDEHRVLEDLRSSFLVKDLGEIVYYLGCHITRDRKARTVMFDQRRYAQTVTDRFKIRKTRVV--PVSGGRAPLSKADGPQNDAEITEMRGIPYREAVGALMWVANMTRPDLAYTAHMLAKSGDNLGPGHWKAVVKALQYLK 252
            DD+   +++K  +  V E+L   F + DLG   + LG  + RDR  R +   QR+Y   + +RF++     V  P+  G   LSKA  P++  EI  M+ +PYR+ VGALM++A  TRPD++Y   +LA+   N GP HWKA     +YL+
Sbjct:  139 DDMTIAAKSKDQDLFVKEELEKHFKLHDLGPTSFLLGVRVERDRSKRLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHR-LSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPSHWKAAKHLCRYLQ 288          
BLAST of mRNA_F-serratus_M_contig1295.2173.1 vs. uniprot
Match: A0A8H7EYE9_AGABI (Integrase catalytic domain-containing protein n=1 Tax=Agaricus bisporus var. burnettii TaxID=192524 RepID=A0A8H7EYE9_AGABI)

HSP 1 Score: 107 bits (267), Expect = 4.610e-22
Identity = 57/152 (37.50%), Postives = 87/152 (57.24%), Query Frame = 0
Query:  103 SDDLLRPSETKQDEHRVLEDLRSSFLVKDLGEIVYYLGCHITRDRKARTVMFDQRRYAQTVTDRFKIRKT--RVVPVSGGRAPLSKADGPQNDAEITEMRGIPYREAVGALMWVANMTRPDLAYTAHMLAKSGDNLGPGHWKAVVKALQYLK 252
            +DD+L  S T+  E +  ++L  S+ +KDLGE  + LG  I R+     +   QR Y++ + DRF +     R  P+  G   LS  D P  + E  EM+ +PYREA+G+LMW+   TRPDL++  ++L++  +N G  HW A+   L YLK
Sbjct: 1135 TDDILGASSTQAGELKAKDELARSYELKDLGEAKFILGMKIERNEATGNIRLSQRAYSERILDRFHMSDANPRSTPLPAGIT-LSINDSPNTEEEKLEMKDVPYREALGSLMWLQVATRPDLSFAVNLLSRFANNPGRAHWVALRHTLGYLK 1285          
BLAST of mRNA_F-serratus_M_contig1295.2173.1 vs. uniprot
Match: A0A4S4K791_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4K791_9AGAM)

HSP 1 Score: 105 bits (263), Expect = 4.790e-22
Identity = 58/151 (38.41%), Postives = 86/151 (56.95%), Query Frame = 0
Query:  104 DDLLRPSETKQDEHRVLEDLRSSFLVKDLGEIVYYLGCHITRDRKARTVMFDQRRYAQTVTDRFKIRKTRVV--PVSGGRAPLSKADGPQNDAEITEMRGIPYREAVGALMWVANMTRPDLAYTAHMLAKSGDNLGPGHWKAVVKALQYLK 252
            DD+   +++K     V E+L   F + DLG   + LG  + RDR  R +   QR+Y   + +RF++     V  P+  G   LSKA  P++  EI  M+ +PYR+ VGALM++A  TRPD++Y   +LA+   N GPGHWKA     +YL+
Sbjct:  239 DDMTIAAKSKDQYLFVKEELEKHFKLHDLGPTSFLLGVRVERDRSKRLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHR-LSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQ 388          
BLAST of mRNA_F-serratus_M_contig1295.2173.1 vs. uniprot
Match: A0A8H7F6Y3_AGABI (Integrase catalytic domain-containing protein n=1 Tax=Agaricus bisporus var. burnettii TaxID=192524 RepID=A0A8H7F6Y3_AGABI)

HSP 1 Score: 107 bits (266), Expect = 6.230e-22
Identity = 55/151 (36.42%), Postives = 87/151 (57.62%), Query Frame = 0
Query:  103 SDDLLRPSETKQDEHRVLEDLRSSFLVKDLGEIVYYLGCHITRDRKARTVMFDQRRYAQTVTDRFKIRKTRVVPVS-GGRAPLSKADGPQNDAEITEMRGIPYREAVGALMWVANMTRPDLAYTAHMLAKSGDNLGPGHWKAVVKALQYLK 252
            +DD+L  S T++ E     +L  S+ +KDLG+  + LG  I RD    ++   QR Y + + +RF ++  +  P        LS  D PQ + E  EM+ +PYREA+G+LMW+   TRPDL++  ++L++  +N G  HW+A+   L YLK
Sbjct: 1142 TDDILGASSTERGEFLAKSELGRSYKLKDLGQANFILGMKIERDETTGSITLSQRAYCERILERFHMQDAKPQPTPLKPNIVLSIDDMPQTEQEKLEMKNVPYREALGSLMWLQVATRPDLSFAVNLLSRFANNPGRKHWEALKHTLAYLK 1292          
BLAST of mRNA_F-serratus_M_contig1295.2173.1 vs. uniprot
Match: A0A8H7F054_AGABI (Integrase catalytic domain-containing protein n=1 Tax=Agaricus bisporus var. burnettii TaxID=192524 RepID=A0A8H7F054_AGABI)

HSP 1 Score: 107 bits (266), Expect = 6.240e-22
Identity = 58/152 (38.16%), Postives = 87/152 (57.24%), Query Frame = 0
Query:  103 SDDLLRPSETKQDEHRVLEDLRSSFLVKDLGEIVYYLGCHITRDRKARTVMFDQRRYAQTVTDRFKIR--KTRVVPVSGGRAPLSKADGPQNDAEITEMRGIPYREAVGALMWVANMTRPDLAYTAHMLAKSGDNLGPGHWKAVVKALQYLK 252
            +DD+L  S T+  E +   +L  S+ +KDLGE  + LG  I RD     +   QR YA+ V +RF +   K R  P+      LS  D P  + E+ +M+ +PYREA+G+LMW+   TRPDL+Y  ++L++  +N G  HW+ +   L YLK
Sbjct: 1154 TDDILGASSTESGEIKAKGELSRSYELKDLGEARFILGMKIERDTNG-NIRLSQRAYAERVLERFHMADAKPRSTPLPTS-VTLSINDSPSTEEEVRDMKNVPYREALGSLMWLQVATRPDLSYAVNLLSRFANNPGRNHWEVLQHTLAYLK 1303          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1295.2173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A5B4D6_VITVI3.560e-2633.47Integrase catalytic domain-containing protein n=1 ... [more]
A0A2P4XRY4_9STRA2.970e-2533.33Integrase catalytic core protein n=1 Tax=Phytophth... [more]
A0A8H7C626_AGABI3.880e-2428.62Uncharacterized protein n=1 Tax=Agaricus bisporus ... [more]
A0A8H7F4A3_AGABI5.560e-2440.13Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4S4K4A0_9AGAM2.960e-2340.44Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4S4LBP1_9AGAM3.380e-2237.75Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8H7EYE9_AGABI4.610e-2237.50Integrase catalytic domain-containing protein n=1 ... [more]
A0A4S4K791_9AGAM4.790e-2238.41Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8H7F6Y3_AGABI6.230e-2236.42Integrase catalytic domain-containing protein n=1 ... [more]
A0A8H7F054_AGABI6.240e-2238.16Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 21..93
e-value: 2.2E-8
score: 34.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1295contigF-serratus_M_contig1295:98716..99684 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1295.2173.1mRNA_F-serratus_M_contig1295.2173.1Fucus serratus malemRNAF-serratus_M_contig1295 98653..99742 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1295.2173.1 ID=prot_F-serratus_M_contig1295.2173.1|Name=mRNA_F-serratus_M_contig1295.2173.1|organism=Fucus serratus male|type=polypeptide|length=317bp
MDGQIARGVRKAIDRLKGKIVLGTKIVIKRKVGQDGRFLAQDFRQIKGIH
YQESSLPTPTQSSIRMALAVMLLLDWEGRQLDVEITFLEADVELPDGYRD
SPSDDLLRPSETKQDEHRVLEDLRSSFLVKDLGEIVYYLGCHITRDRKAR
TVMFDQRRYAQTVTDRFKIRKTRVVPVSGGRAPLSKADGPQNDAEITEMR
GIPYREAVGALMWVANMTRPDLAYTAHMLAKSGDNLGPGHWKAVVKALQY
LKRDGEPRGHIWRRDGGRHKAIGVGGRRSRNLSRYAPLGIGGHGDARWRG
NQLVFAGAESNRDSDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2