prot_F-serratus_M_contig1261.1976.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1261.1976.1
Unique Name	prot_F-serratus_M_contig1261.1976.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	232

Homology

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BLAST of mRNA_F-serratus_M_contig1261.1976.1 vs. uniprot
Match: A0A7S2CVA0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CVA0_9STRA)

HSP 1 Score: 147 bits (370), Expect = 1.530e-39
Identity = 78/204 (38.24%), Postives = 107/204 (52.45%), Query Frame = 0

Query:   31 CKPALQKACESAYLSCRLSVPVDDQQNICGCAALYYGTCLPAAGCTGNEEMTSCIGELVEWNCPDMSVCGNDCTLEDGDPRLPAGTV-VLPLNNFGANYLQLSVCSNGMDTAKLLHFGQVSMSSCDSQDFRVCHLWVAPRTFTAVAFPPQVTQLQVEQCVRLE--------------GAETDIWSDNW--ECLSEPLPAKYYGS 217
            C    ++ C   Y  CR +   +     C CA   YG CL  AGC   + MT C+  L+  NC DMSVCG++C +  G+  +   T  VLP+NNFG NYLQ SVC  G ++ +L  F QVSM  CD   F VC  W+ P TFTA+A     + +++E+CV ++               A+     DN+  ECL EP P +YYG+
Sbjct:   24 CNMRAEQKCIQEYEECRQTGLAESSVTECECATELYGLCLRKAGCAA-DRMTECVSRLMGENCEDMSVCGSNC-VGQGNHLIDMDTARVLPVNNFGENYLQFSVCHQGPNSHRLSKFSQVSMERCDESSFHVCPYWIPPNTFTALAISANASYIRMERCVYVDYNEDAPTPSPTESGTADDSSGDDNFVAECLKEPKPVEYYGT 225

[Close]

BLAST of mRNA_F-serratus_M_contig1261.1976.1 vs. uniprot
Match: A0A7S2SLL9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SLL9_9STRA)

HSP 1 Score: 145 bits (366), Expect = 2.400e-39
Identity = 77/194 (39.69%), Postives = 102/194 (52.58%), Query Frame = 0

Query:   33 PALQKACESAYLSCRL-SVPVDDQQNICGCAALYYGTCLPAAGCTGNEEMTSCIGELVEWNCPDMSVCGNDCTLEDGDPRLPAGTVVLPLNNFGANYLQLSVCSNGMDTAKLLHFGQVSMSSCDSQDFRVCHLWVAPRTFTAVAFPPQVTQLQVEQCVRLEGAETDIWSDNWE--------CLSEPLPAKYYGS 217
            P  +  CE  Y+ C L   P +D    C CAA +YG CL  AGC   E M  CI E +  +C DMSVCG++C        +     +LP+NNFGANY+Q SVC  G+D   L  F  V M  CD   F+VC  W+ PRTFT +A P   T +++E+ V L+    D W+ +W          L  P P +YYG+
Sbjct:    1 PLKEYQCEQDYMLCILYRGPANDPPTACMCAAEFYGACLRDAGCAP-ERMMDCIDEHMLQDCQDMSVCGSNCIGNGNSYDIRNQARILPVNNFGANYIQFSVCDLGIDLDILSRFETVRMRRCDDATFKVCPFWIPPRTFTGLAIPKNSTYIKMERTVYLQKRLADEWNVSWTRTDDFVAAVLRNPPPEEYYGT 193

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1261.1976.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1261.1976.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A7S2CVA0_9STRA	1.530e-39	38.24	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
A0A7S2SLL9_9STRA	2.400e-39	39.69	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..25
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..5
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 26..232
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 6..17
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 18..25

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1261	contig	F-serratus_M_contig1261:125113..129777 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1261.1976.1	mRNA_F-serratus_M_contig1261.1976.1	Fucus serratus male	mRNA	F-serratus_M_contig1261 125113..129777 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1261.1976.1 ID=prot_F-serratus_M_contig1261.1976.1|Name=mRNA_F-serratus_M_contig1261.1976.1|organism=Fucus serratus male|type=polypeptide|length=232bp
MVSKTVASAISLVAGFLNGPGSSFGSEIAICKPALQKACESAYLSCRLSV
PVDDQQNICGCAALYYGTCLPAAGCTGNEEMTSCIGELVEWNCPDMSVCG
NDCTLEDGDPRLPAGTVVLPLNNFGANYLQLSVCSNGMDTAKLLHFGQVS
MSSCDSQDFRVCHLWVAPRTFTAVAFPPQVTQLQVEQCVRLEGAETDIWS
DNWECLSEPLPAKYYGSTAYYFDGSGGSIYDS