prot_F-serratus_M_contig1261.1976.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1261.1976.1
Unique Nameprot_F-serratus_M_contig1261.1976.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length232
Homology
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BLAST of mRNA_F-serratus_M_contig1261.1976.1 vs. uniprot
Match: A0A7S2CVA0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CVA0_9STRA)

HSP 1 Score: 147 bits (370), Expect = 1.530e-39
Identity = 78/204 (38.24%), Postives = 107/204 (52.45%), Query Frame = 0 
Query:   31 CKPALQKACESAYLSCRLSVPVDDQQNICGCAALYYGTCLPAAGCTGNEEMTSCIGELVEWNCPDMSVCGNDCTLEDGDPRLPAGTV-VLPLNNFGANYLQLSVCSNGMDTAKLLHFGQVSMSSCDSQDFRVCHLWVAPRTFTAVAFPPQVTQLQVEQCVRLE--------------GAETDIWSDNW--ECLSEPLPAKYYGS 217
            C    ++ C   Y  CR +   +     C CA   YG CL  AGC   + MT C+  L+  NC DMSVCG++C +  G+  +   T  VLP+NNFG NYLQ SVC  G ++ +L  F QVSM  CD   F VC  W+ P TFTA+A     + +++E+CV ++               A+     DN+  ECL EP P +YYG+
Sbjct:   24 CNMRAEQKCIQEYEECRQTGLAESSVTECECATELYGLCLRKAGCAA-DRMTECVSRLMGENCEDMSVCGSNC-VGQGNHLIDMDTARVLPVNNFGENYLQFSVCHQGPNSHRLSKFSQVSMERCDESSFHVCPYWIPPNTFTALAISANASYIRMERCVYVDYNEDAPTPSPTESGTADDSSGDDNFVAECLKEPKPVEYYGT 225
[Close]
BLAST of mRNA_F-serratus_M_contig1261.1976.1 vs. uniprot
Match: A0A7S2SLL9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SLL9_9STRA)

HSP 1 Score: 145 bits (366), Expect = 2.400e-39
Identity = 77/194 (39.69%), Postives = 102/194 (52.58%), Query Frame = 0 
Query:   33 PALQKACESAYLSCRL-SVPVDDQQNICGCAALYYGTCLPAAGCTGNEEMTSCIGELVEWNCPDMSVCGNDCTLEDGDPRLPAGTVVLPLNNFGANYLQLSVCSNGMDTAKLLHFGQVSMSSCDSQDFRVCHLWVAPRTFTAVAFPPQVTQLQVEQCVRLEGAETDIWSDNWE--------CLSEPLPAKYYGS 217
            P  +  CE  Y+ C L   P +D    C CAA +YG CL  AGC   E M  CI E +  +C DMSVCG++C        +     +LP+NNFGANY+Q SVC  G+D   L  F  V M  CD   F+VC  W+ PRTFT +A P   T +++E+ V L+    D W+ +W          L  P P +YYG+
Sbjct:    1 PLKEYQCEQDYMLCILYRGPANDPPTACMCAAEFYGACLRDAGCAP-ERMMDCIDEHMLQDCQDMSVCGSNCIGNGNSYDIRNQARILPVNNFGANYIQFSVCDLGIDLDILSRFETVRMRRCDDATFKVCPFWIPPRTFTGLAIPKNSTYIKMERTVYLQKRLADEWNVSWTRTDDFVAAVLRNPPPEEYYGT 193
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1261.1976.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S2CVA0_9STRA1.530e-3938.24Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2SLL9_9STRA2.400e-3939.69Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..232
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1261contigF-serratus_M_contig1261:125113..129777 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1261.1976.1mRNA_F-serratus_M_contig1261.1976.1Fucus serratus malemRNAF-serratus_M_contig1261 125113..129777 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1261.1976.1 ID=prot_F-serratus_M_contig1261.1976.1|Name=mRNA_F-serratus_M_contig1261.1976.1|organism=Fucus serratus male|type=polypeptide|length=232bp
MVSKTVASAISLVAGFLNGPGSSFGSEIAICKPALQKACESAYLSCRLSV
PVDDQQNICGCAALYYGTCLPAAGCTGNEEMTSCIGELVEWNCPDMSVCG
NDCTLEDGDPRLPAGTVVLPLNNFGANYLQLSVCSNGMDTAKLLHFGQVS
MSSCDSQDFRVCHLWVAPRTFTAVAFPPQVTQLQVEQCVRLEGAETDIWS
DNWECLSEPLPAKYYGSTAYYFDGSGGSIYDS
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