prot_F-serratus_M_contig1208.1636.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1208.1636.1
Unique Name	prot_F-serratus_M_contig1208.1636.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	159

Homology

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BLAST of mRNA_F-serratus_M_contig1208.1636.1 vs. uniprot
Match: A0A6H5KAI3_9PHAE (Chromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAI3_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 9.690e-39
Identity = 64/144 (44.44%), Postives = 96/144 (66.67%), Query Frame = 0

Query:   18 KRVAASAGSMPSFEVGDYVLVARVRNLGSASKLMTTWTGPWRVVSGGSPHVHNVQDIVTGETKEVHVARMRAYSDSPLALGAEAQGLFETTKHQGMYEIQDILNIA-----GDYKLQVAWIGLDDEDATWEPVEVMVKDVPNIF 156
            +R AAS G +P+F VGDYV+VARVR  G   KL +TWTGPWRVVS    HV+ VQ+IV G+ ++VHVAR+R Y+DS L + ++ + +F+ +  QG +E++ ILNI        Y ++V W G ++++ TW+P+  + +D P   
Sbjct:    3 QRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIGPAHDGSGYLVRVRWAGFEEDEDTWQPLSDIYQDAPQFL 146

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BLAST of mRNA_F-serratus_M_contig1208.1636.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 4.600e-38
Identity = 69/159 (43.40%), Postives = 103/159 (64.78%), Query Frame = 0

Query:    3 LQKEVLGGVRAARDRKRVAASAGSMPSFEVGDYVLVARVRNLGSASKLMTTWTGPWRVVSGGSPHVHNVQDIVTGETKEVHVARMRAYSDSPLALGAEAQGLFETTKHQGMYEIQDILNIA-----GDYKLQVAWIGLDDEDATWEPVEVMVKDVPNIF 156
            L K++   V   R R+R AAS G +P+F VGDYV+VARVR  G   KL +TWTGPWRVVS    HV+ VQ+IV G+ ++VHVAR+R Y+DS L + ++ + +F+ +  QG +E++ ILNI        Y ++V W G ++++ TW+P+  + +D P   
Sbjct:  243 LHKQIQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIGPAHDGSGYLVRVRWAGFEEDEDTWQPLSDIYQDAPQFL 401

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BLAST of mRNA_F-serratus_M_contig1208.1636.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 8.460e-37
Identity = 70/159 (44.03%), Postives = 103/159 (64.78%), Query Frame = 0

Query:    3 LQKEVLGGVRAARDRKRVAASAGSMPSFEVGDYVLVARVRNLGSASKLMTTWTGPWRVVSGGSPHVHNVQDIVTGETKEVHVARMRAYSDSPLALGAEAQGLFETTKHQGMYEIQDILNIA-----GDYKLQVAWIGLDDEDATWEPVEVMVKDVPNIF 156
            L K+V   V   R R+R AAS G +P+F VGDYV+VARVR  G   KL +TWTGPWRVVS    HV+ VQ+IV G+ ++VHVAR+R Y+DS L + ++ + +F+ +  QG +E++ ILNI        Y ++V W G ++++ TW+P+  + +D P   
Sbjct: 1466 LHKQVQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIGPAHDGSGYLVRVRWAGFEEDEDTWQPLSDIYQDAPQFL 1624

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BLAST of mRNA_F-serratus_M_contig1208.1636.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 6.250e-21
Identity = 59/161 (36.65%), Postives = 89/161 (55.28%), Query Frame = 0

Query:    3 LQKEVLGGVRAARDRKRVAASAGSMPSFEVGDYVLVARVRNLGSASKLMTTWTGPWRVVSGGSPHVHNVQDIVTGETKEVHVARMRAYSDSPLALGAEAQGLFETTKHQGMYEIQDI--LNIAGD---YKLQVAWIGLDDEDATWEPVEVMVKDVPNIFSG 158
            L KEVL  V+A+R + R +A  GS+P F VGDYV+VA       A +L                HV+ VQ+IV+GE ++VHVAR+R Y+D+ L + AE + +F+    QG +E+  I  +++A D   + ++V W+G D E+ TWE +  M    P     
Sbjct: 1568 LHKEVLDKVQASRSKHRASARVGSLPDFVVGDYVIVA-------AERL----------------HVYGVQNIVSGEVRDVHVARLRFYADAALEITAELKEVFQHAFTQGEFEMAAIVDMSVAEDGPGFDVEVEWVGFDKEENTWEELSKMWDAAPQFVKS 1705

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BLAST of mRNA_F-serratus_M_contig1208.1636.1 vs. uniprot
Match: A0A6G0RJA2_9STRA (Chromo domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0RJA2_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 8.780e-20
Identity = 51/133 (38.35%), Postives = 77/133 (57.89%), Query Frame = 0

Query:   27 MPSFEVGDYVLVARVRNLGSASKLMTTWTGPWRVVSGGSPHVHNVQDIVTGETKEVHVARMRAYSDSPLALGAEAQGLFETTKHQGM-YEIQDILNIAGD-----YKLQVAWIGLDDEDATWEPVEVMVKDVP 153
            M  FEVGD+VL A V +  S SKL   W GP +V +  S  +  ++++VTG+ +E H +R++ YSDS L +  E   L +   H    + +   L  + D     YKL V W GL +++ +WEPV+VM++DVP
Sbjct:    1 MAQFEVGDFVLYADV-SAHSRSKLCVRWCGPAQVTAATSNWIFKIKNLVTGDEREAHASRLKFYSDSSLEVSEE---LLQHVAHNSEGHVVSKFLRASYDTAAKGYKLLVRWRGLSEQEDSWEPVQVMLEDVP 129

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BLAST of mRNA_F-serratus_M_contig1208.1636.1 vs. uniprot
Match: A0A6A3EE69_9STRA (Chromo domain-containing protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3EE69_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 6.090e-19
Identity = 55/149 (36.91%), Postives = 81/149 (54.36%), Query Frame = 0

Query:   11 VRAARDRKRVAASAGSMPSFEVGDYVLVARVRNLGSASKLMTTWTGPWRVVSGGSPHVHNVQDIVTGETKEVHVARMRAYSDSPLALGAEAQGLFETTKHQGM-YEIQDILNIAGD-----YKLQVAWIGLDDEDATWEPVEVMVKDVP 153
            VRA   + R       M  FEVGD+VL A V    S SKL   W GP +V +  S  +  ++++VTG+ +E H +R++ YSDS L +  E   L +   H    + +   L  + D     YKL V W GL +++ +WEPV+VM++DVP
Sbjct:   56 VRARGRQVRGQKQGTRMAQFEVGDFVLYADVW-AHSRSKLCVRWCGPAQVTAATSNWIFKIKNLVTGDEREAHASRLKFYSDSSLEVSEE---LLQHVAHNSEGHVVSKFLRASYDTAAKSYKLLVRWRGLSEQEDSWEPVQVMLEDVP 200

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BLAST of mRNA_F-serratus_M_contig1208.1636.1 vs. uniprot
Match: A0A6A3PHN2_9STRA (Chromo domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3PHN2_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.160e-17
Identity = 52/148 (35.14%), Postives = 84/148 (56.76%), Query Frame = 0

Query:   15 RDRKRV---AASAGSMPSFEVGDYVLVARVRNLGSASKLMTTWTGPWRVVSGGSPHVHNVQDIVTGETKEVHVARMRAYSDSPLALGAEAQGLFETTKHQGMYEIQDILNI------AGDYKLQVAWIGLDDEDATWEPVEVMVKDVP 153
            +++KR+   A + G+  +F+VGDYVL +RV    + +KL+  W GP+ V     PH   ++ ++TG T EVH +R+R Y+DS L +  E   + E   +QGM    D  +       A  ++L V W GL D +A+WEP++ +  +VP
Sbjct:   41 KEKKRLYDMATAKGTTTNFDVGDYVLWSRVDERLAHNKLLAQWVGPFAVTEA-RPHSFMIRHLLTGSTYEVHGSRLRFYADSSLDVTKE---ILEFVSNQGMLLGVDGFSDHRYNADASRWELLVKWTGLQDIEASWEPLKSLKAEVP 184

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BLAST of mRNA_F-serratus_M_contig1208.1636.1 vs. uniprot
Match: A0A6G0JFH4_9STRA (Chromo domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0JFH4_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.500e-17
Identity = 54/155 (34.84%), Postives = 86/155 (55.48%), Query Frame = 0

Query:    3 LQKEVLGGVRAARDRKRVAASAGSMPSFEVGDYVLVARVRNLGSASKLMTTWTGPWRVVSGGSPHVHNVQDIVTGETKEVHVARMRAYSDSPLALGAEAQGLFETTKHQGMY----EIQDILNIAGDYKLQVAWIGLDDEDATWEPVEVMVKDVP 153
            + +EV+  +R  R  + +  S GS  +F VGD+VL +R+    +  KL+  W GP+ VV    PH   ++ +VT +T +VH +R++ YSDS L +  E   +     +QGM      I+   N  GD++L V+W+GL DE+ +WE +  M   VP
Sbjct:   82 MHREVVD-LREKRRLQNMQLSKGSPCNFAVGDFVLWSRIDQRLTVDKLLARWVGPFEVVET-RPHSFVIRHLVTDQTFDVHCSRLKFYSDSALNVDEE---MLAHIGNQGMLLGVEAIKHHRNEHGDWQLFVSWVGLQDEEDSWESLRSMNAQVP 231

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BLAST of mRNA_F-serratus_M_contig1208.1636.1 vs. uniprot
Match: A0A6G0RPX5_9STRA (Uncharacterized protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0RPX5_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.680e-17
Identity = 53/148 (35.81%), Postives = 89/148 (60.14%), Query Frame = 0

Query:   15 RDRKRV---AASAGSMPSFEVGDYVLVARVRNLGSASKLMTTWTGPWRVVSGGSPHVHNVQDIVTGETKEVHVARMRAYSDSPLALGAEAQGLFETTKHQGMY-EIQDILN-----IAGDYKLQVAWIGLDDEDATWEPVEVMVKDVP 153
            +++KR+   A + G + +F VGD+VL +RV +    SKL+  W GP+RVV     H   ++ ++T +  EVH +R++ Y DS L + AE   L E    QG+   ++ I+N     ++ ++++QVAWIGL+D + +WEP+  +  DVP
Sbjct:  207 KEKKRLYEMARAKGGICNFAVGDFVLWSRVDSRLQGSKLLVRWVGPFRVVEARQ-HSFIIEHLITKDKVEVHGSRLKFYCDSSLNVTAE---LKEHVAKQGIVLGVRAIVNHRNNPVSNEWEVQVAWIGLEDVENSWEPLRRIYADVP 350

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BLAST of mRNA_F-serratus_M_contig1208.1636.1 vs. uniprot
Match: A0A225VKM9_9STRA (RNA-directed DNA polymerase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VKM9_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 4.780e-17
Identity = 54/143 (37.76%), Postives = 85/143 (59.44%), Query Frame = 0

Query:   15 RDRKRV---AASAGSMPSFEVGDYVLVARVRNLGSASKLMTTWTGPWRVVSGGSPHVHNVQDIVTGETKEVHVARMRAYSDSPLALGAEAQGLFETTKHQGMY-EIQDILNIAGDYKLQVAWIGLDDEDATWEPVEVMVKDVP 153
            R++KR+   A + G + +F VGD+VL +RV +    SKL+  W GP+RVV     H   VQ ++T +  EVH +R++ Y DS L + AE   L E    QG+   ++  +  +  +++QVAWIGL+D + +WEP+  +  DVP
Sbjct: 1061 REKKRLYEMARAKGRICNFVVGDFVLWSRVDSRLQGSKLLVRWVGPFRVVEARQ-HSFIVQHLITKDKVEVHGSRLKFYCDSSLNVTAE---LKEHVAKQGIVLGVRASITGSTQWEVQVAWIGLEDVENSWEPLRSIYVDVP 1199

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1208.1636.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1208.1636.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KAI3_9PHAE	9.690e-39	44.44	Chromo domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A6H5JVS6_9PHAE	4.600e-38	43.40	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L7F6_9PHAE	8.460e-37	44.03	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K5A5_9PHAE	6.250e-21	36.65	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6G0RJA2_9STRA	8.780e-20	38.35	Chromo domain-containing protein n=1 Tax=Phytophth...	[more]
A0A6A3EE69_9STRA	6.090e-19	36.91	Chromo domain-containing protein n=3 Tax=Phytophth...	[more]
A0A6A3PHN2_9STRA	1.160e-17	35.14	Chromo domain-containing protein n=4 Tax=Phytophth...	[more]
A0A6G0JFH4_9STRA	1.500e-17	34.84	Chromo domain-containing protein n=1 Tax=Phytophth...	[more]
A0A6G0RPX5_9STRA	1.680e-17	35.81	Uncharacterized protein n=4 Tax=Phytophthora fraga...	[more]
A0A225VKM9_9STRA	4.780e-17	37.76	RNA-directed DNA polymerase n=1 Tax=Phytophthora m...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 114..158 score: 8.883
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 111..150

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1208	contig	F-serratus_M_contig1208:82872..83366 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1208.1636.1	mRNA_F-serratus_M_contig1208.1636.1	Fucus serratus male	mRNA	F-serratus_M_contig1208 82872..83366 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1208.1636.1 ID=prot_F-serratus_M_contig1208.1636.1|Name=mRNA_F-serratus_M_contig1208.1636.1|organism=Fucus serratus male|type=polypeptide|length=159bp
EELQKEVLGGVRAARDRKRVAASAGSMPSFEVGDYVLVARVRNLGSASKL
MTTWTGPWRVVSGGSPHVHNVQDIVTGETKEVHVARMRAYSDSPLALGAE
AQGLFETTKHQGMYEIQDILNIAGDYKLQVAWIGLDDEDATWEPVEVMVK
DVPNIFSG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000953	Chromo/chromo_shadow_dom
IPR016197	Chromo-like_dom_sf