prot_F-serratus_M_contig1156.1283.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1156.1283.1
Unique Name	prot_F-serratus_M_contig1156.1283.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	103

Homology

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BLAST of mRNA_F-serratus_M_contig1156.1283.1 vs. uniprot
Match: A0A453N2H0_AEGTS (Histone H4 n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453N2H0_AEGTS)

HSP 1 Score: 163 bits (412), Expect = 2.520e-50
Identity = 84/102 (82.35%), Postives = 93/102 (91.18%), Query Frame = 0

Query:    1 VWTRKGRQGIGKRRRQTPPQGTPRQHPRITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 102
            V +R+GR+G G+ R +  P+G+  QHP ITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    1 VRSRQGREGPGQGRHEASPEGSAGQHPGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 102

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BLAST of mRNA_F-serratus_M_contig1156.1283.1 vs. uniprot
Match: A0A6V7PWM6_ANACO (Histone H4 n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7PWM6_ANACO)

HSP 1 Score: 153 bits (387), Expect = 1.630e-46
Identity = 82/98 (83.67%), Postives = 87/98 (88.78%), Query Frame = 0

Query:    5 KGRQGIGKRRRQTPPQGTPRQHPRITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 102
            KG +G G R  +  P+G   QHP ITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    6 KGGRGWG-RGSEAAPEGAAGQHPGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 102

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BLAST of mRNA_F-serratus_M_contig1156.1283.1 vs. uniprot
Match: UPI001BE4C7AC (histone H4-like n=1 Tax=Anopheles merus TaxID=30066 RepID=UPI001BE4C7AC)

HSP 1 Score: 149 bits (377), Expect = 2.060e-44
Identity = 82/109 (75.23%), Postives = 89/109 (81.65%), Query Frame = 0

Query:    2 WTRKGRQGIGKRRRQTPPQGTPRQHPR--------ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 102
            W RKGR+G+GK        G  ++H +        ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   45 WKRKGRKGLGK--------GGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 145

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BLAST of mRNA_F-serratus_M_contig1156.1283.1 vs. uniprot
Match: UPI00051C03BC (LOW QUALITY PROTEIN: histone H4-like n=2 Tax=Neognathae TaxID=8825 RepID=UPI00051C03BC)

HSP 1 Score: 147 bits (372), Expect = 2.970e-44
Identity = 81/96 (84.38%), Postives = 83/96 (86.46%), Query Frame = 0

Query:    7 RQGIGKRRRQTPPQGTPRQHPRITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 102
            R G GKR RQ   QG       ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   12 RNGGGKRHRQGVXQG-------ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 100

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BLAST of mRNA_F-serratus_M_contig1156.1283.1 vs. uniprot
Match: M8C6Z1_AEGTA (Histone H4 n=1 Tax=Aegilops tauschii TaxID=37682 RepID=M8C6Z1_AEGTA)

HSP 1 Score: 145 bits (367), Expect = 1.230e-43
Identity = 75/82 (91.46%), Postives = 78/82 (95.12%), Query Frame = 0

Query:   21 GTPRQHPRITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 102
            GT   + RITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    8 GTSAFNTRITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 89

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BLAST of mRNA_F-serratus_M_contig1156.1283.1 vs. uniprot
Match: F0XXB2_AURAN (Histone H4 (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXB2_AURAN)

HSP 1 Score: 145 bits (366), Expect = 1.300e-43
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0

Query:   29 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 102
            ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    6 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 79

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BLAST of mRNA_F-serratus_M_contig1156.1283.1 vs. uniprot
Match: A0A024G0M5_9STRA (Histone H4 n=40 Tax=Stramenopiles TaxID=33634 RepID=A0A024G0M5_9STRA)

HSP 1 Score: 145 bits (366), Expect = 2.670e-43
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0

Query:   29 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 102
            ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

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BLAST of mRNA_F-serratus_M_contig1156.1283.1 vs. uniprot
Match: F0W2L9_9STRA (Histone H4 n=3 Tax=Stramenopiles TaxID=33634 RepID=F0W2L9_9STRA)

HSP 1 Score: 145 bits (366), Expect = 2.670e-43
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0

Query:   29 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 102
            ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

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BLAST of mRNA_F-serratus_M_contig1156.1283.1 vs. uniprot
Match: H4_MASBA (Histone H4 n=1 Tax=Mastigamoeba balamuthi TaxID=108607 RepID=H4_MASBA)

HSP 1 Score: 145 bits (366), Expect = 3.110e-43
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0

Query:   29 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 102
            ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   35 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 108

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BLAST of mRNA_F-serratus_M_contig1156.1283.1 vs. uniprot
Match: H4_SOLLC (Histone H4 n=13 Tax=cellular organisms TaxID=131567 RepID=H4_SOLLC)

HSP 1 Score: 145 bits (365), Expect = 3.790e-43
Identity = 73/74 (98.65%), Postives = 74/74 (100.00%), Query Frame = 0

Query:   29 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 102
            ITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1156.1283.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1156.1283.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A453N2H0_AEGTS	2.520e-50	82.35	Histone H4 n=2 Tax=Aegilops tauschii subsp. strang...	[more]
A0A6V7PWM6_ANACO	1.630e-46	83.67	Histone H4 n=1 Tax=Ananas comosus var. bracteatus ...	[more]
UPI001BE4C7AC	2.060e-44	75.23	histone H4-like n=1 Tax=Anopheles merus TaxID=3006...	[more]
UPI00051C03BC	2.970e-44	84.38	LOW QUALITY PROTEIN: histone H4-like n=2 Tax=Neogn...	[more]
M8C6Z1_AEGTA	1.230e-43	91.46	Histone H4 n=1 Tax=Aegilops tauschii TaxID=37682 R...	[more]
F0XXB2_AURAN	1.300e-43	100.00	Histone H4 (Fragment) n=1 Tax=Aureococcus anophage...	[more]
A0A024G0M5_9STRA	2.670e-43	100.00	Histone H4 n=40 Tax=Stramenopiles TaxID=33634 RepI...	[more]
F0W2L9_9STRA	2.670e-43	100.00	Histone H4 n=3 Tax=Stramenopiles TaxID=33634 RepID...	[more]
H4_MASBA	3.110e-43	100.00	Histone H4 n=1 Tax=Mastigamoeba balamuthi TaxID=10...	[more]
H4_SOLLC	3.790e-43	98.65	Histone H4 n=13 Tax=cellular organisms TaxID=13156...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001951	Histone H4	PRINTS	PR00623	HISTONEH4	coord: 39..59 score: 93.56 coord: 88..99 score: 97.79 coord: 61..75 score: 91.96 coord: 4..15 score: 41.18 coord: 19..38 score: 49.85 coord: 76..88 score: 90.05
IPR001951	Histone H4	SMART	SM00417	h44	coord: 28..89 e-value: 1.3E-25 score: 101.1
IPR009072	Histone-fold	GENE3D	1.10.20.10		coord: 3..102 e-value: 3.0E-45 score: 154.5
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 4..101
IPR035425	CENP-T/Histone H4, histone fold	PFAM	PF15511	CENP-T_C	coord: 26..95 e-value: 1.0E-8 score: 35.2
None	No IPR available	PANTHER	PTHR10484:SF171		coord: 28..102
None	No IPR available	PANTHER	PTHR10484	HISTONE H4	coord: 28..102

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1156	contig	F-serratus_M_contig1156:75032..75340 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1156.1283.1	mRNA_F-serratus_M_contig1156.1283.1	Fucus serratus male	mRNA	F-serratus_M_contig1156 75032..75340 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1156.1283.1 ID=prot_F-serratus_M_contig1156.1283.1|Name=mRNA_F-serratus_M_contig1156.1283.1|organism=Fucus serratus male|type=polypeptide|length=103bp
VWTRKGRQGIGKRRRQTPPQGTPRQHPRITKPAIRRLARRGGVKRISGLI
YEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGF
GG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001951	Histone_H4
IPR009072	Histone-fold
IPR035425	CENP-T/H4_C